RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 C20orf173Q96LM9 149 aa10.43□□□□□ -0.74
HDAC7-228ENST00000548938 CFAP46Q8IYW2 2715 aa10.43□□□□□ -0.74
HDAC7-228ENST00000548938 MINOS1Q5TGZ0 78 aa10.42□□□□□ -0.74
HDAC7-228ENST00000548938 DLX4Q92988 240 aaPredicted RBP10.42□□□□□ -0.74
HDAC7-228ENST00000548938 C16orf92Q96LL3 132 aa10.42□□□□□ -0.74
HDAC7-228ENST00000548938 MINOS1-NBL1R4GNA1 71 aa10.42□□□□□ -0.74
HDAC7-228ENST00000548938 MGPP08493 103 aa10.42□□□□□ -0.74
HDAC7-228ENST00000548938 ZFP36P26651 326 aaKnown RBP10.42□□□□□ -0.74
HDAC7-228ENST00000548938 CKS1BP61024 79 aa10.42□□□□□ -0.74
HDAC7-228ENST00000548938 NFE4Q86UQ8 179 aa10.42□□□□□ -0.74
HDAC7-228ENST00000548938 SYT8Q8NBV8 401 aa10.42□□□□□ -0.74
HDAC7-228ENST00000548938 COL12A1Q99715 3063 aa10.42□□□□□ -0.74
HDAC7-228ENST00000548938 LOC107984156A0A0G2JMH3 177 aa10.42□□□□□ -0.74
HDAC7-228ENST00000548938 TSPAN13O95857 204 aa10.42□□□□□ -0.74
HDAC7-228ENST00000548938 COX6B1P14854 86 aa10.42□□□□□ -0.74
HDAC7-228ENST00000548938 UBE2D1P51668 147 aa10.42□□□□□ -0.74
HDAC7-228ENST00000548938 DEFB1P60022 68 aa10.42□□□□□ -0.74
HDAC7-228ENST00000548938 ZFP2Q6ZN57 461 aa10.42□□□□□ -0.74
HDAC7-228ENST00000548938 ARL17AQ8IVW1 177 aa10.42□□□□□ -0.74
HDAC7-228ENST00000548938 KLHL30-AS1Q8NEE0 82 aa10.42□□□□□ -0.74
HDAC7-228ENST00000548938 CDIP1Q9H305 208 aa10.41□□□□□ -0.74
HDAC7-228ENST00000548938 DPH3P1Q9H4G8 78 aa10.41□□□□□ -0.74
HDAC7-228ENST00000548938 S100A4P26447 101 aaKnown RBP10.41□□□□□ -0.74
HDAC7-228ENST00000548938 PSMB2P49721 201 aa10.41□□□□□ -0.74
HDAC7-228ENST00000548938 SRSF9Q13242 221 aaKnown RBP eCLIP10.41□□□□□ -0.74
HDAC7-228ENST00000548938 FHL3Q13643 280 aa10.41□□□□□ -0.74
HDAC7-228ENST00000548938 TCTEX1D4Q5JR98 221 aa10.41□□□□□ -0.74
HDAC7-228ENST00000548938 EEF1AKMT3Q96AZ1 226 aa10.41□□□□□ -0.74
HDAC7-228ENST00000548938 EMP1P54849 157 aa10.4□□□□□ -0.74
HDAC7-228ENST00000548938 ZFAND2AQ8N6M9 145 aa10.4□□□□□ -0.74
HDAC7-228ENST00000548938 ZNF418Q8TF45 676 aaPredicted RBP10.4□□□□□ -0.74
HDAC7-228ENST00000548938 PTH2Q96A98 100 aa10.4□□□□□ -0.74
HDAC7-228ENST00000548938 U3KQE9 123 aa10.4□□□□□ -0.74
HDAC7-228ENST00000548938 SPTAN1Q13813 2472 aaKnown RBP10.4□□□□□ -0.74
HDAC7-228ENST00000548938 IGSF10Q6WRI0 2623 aa10.4□□□□□ -0.75
HDAC7-228ENST00000548938 GNLYP22749 145 aa10.4□□□□□ -0.75
HDAC7-228ENST00000548938 DEFB104AQ8WTQ1 72 aa10.4□□□□□ -0.75
HDAC7-228ENST00000548938 GLMPQ8WWB7 406 aa10.4□□□□□ -0.75
HDAC7-228ENST00000548938 DUSP14O95147 198 aaKnown RBP10.39□□□□□ -0.75
HDAC7-228ENST00000548938 KLK9Q2XQG4 91 aa10.39□□□□□ -0.75
HDAC7-228ENST00000548938 ATP6V0E2Q8NHE4 81 aa10.39□□□□□ -0.75
HDAC7-228ENST00000548938 ITLN2Q8WWU7 325 aaPredicted RBP10.39□□□□□ -0.75
HDAC7-228ENST00000548938 KLK9Q9UKQ9 250 aa10.39□□□□□ -0.75
HDAC7-228ENST00000548938 PHLDA3Q9Y5J5 127 aa10.39□□□□□ -0.75
HDAC7-228ENST00000548938 CD7P09564 240 aa10.39□□□□□ -0.75
HDAC7-228ENST00000548938 CENPVL3A0A0U1RRI6 287 aa10.38□□□□□ -0.75
HDAC7-228ENST00000548938 C11orf86A6NJI1 115 aa10.38□□□□□ -0.75
HDAC7-228ENST00000548938 CRYGDP07320 174 aa10.38□□□□□ -0.75
HDAC7-228ENST00000548938 ASIPP42127 132 aa10.38□□□□□ -0.75
HDAC7-228ENST00000548938 ANXA2RQ3ZCQ2 193 aa10.38□□□□□ -0.75
HDAC7-228ENST00000548938 AJUBAQ96IF1 538 aa10.38□□□□□ -0.75
HDAC7-228ENST00000548938 SIRPDQ9H106 197 aa10.38□□□□□ -0.75
HDAC7-228ENST00000548938 ZFHX3Q15911 3703 aa10.38□□□□□ -0.75
HDAC7-228ENST00000548938 C9orf139Q6ZV77 190 aa10.38□□□□□ -0.75
HDAC7-228ENST00000548938 TRBV7-1A0A0A6YYK4 115 aa10.37□□□□□ -0.75
HDAC7-228ENST00000548938 TRAV21A0A0B4J279 112 aa10.37□□□□□ -0.75
HDAC7-228ENST00000548938 CRYBA4P53673 196 aa10.37□□□□□ -0.75
HDAC7-228ENST00000548938 UBE2D3P61077 147 aa10.37□□□□□ -0.75
HDAC7-228ENST00000548938 UBE2D2P62837 147 aa10.37□□□□□ -0.75
HDAC7-228ENST00000548938 GPHB5Q86YW7 130 aa10.37□□□□□ -0.75
HDAC7-228ENST00000548938 LENEPQ9Y5L5 61 aa10.37□□□□□ -0.75
HDAC7-228ENST00000548938 TSHBP01222 138 aa10.37□□□□□ -0.75
HDAC7-228ENST00000548938 MT-ATP8P03928 68 aa10.37□□□□□ -0.75
HDAC7-228ENST00000548938 IGLV4-69A0A075B6H9 119 aa10.36□□□□□ -0.75
HDAC7-228ENST00000548938 A0A1W2PPR1 153 aa10.36□□□□□ -0.75
HDAC7-228ENST00000548938 SAA4P35542 130 aa10.36□□□□□ -0.75
HDAC7-228ENST00000548938 C11orf71Q6IPW1 123 aa10.36□□□□□ -0.75
HDAC7-228ENST00000548938 LINC00527Q9UJ94 153 aa10.36□□□□□ -0.75
HDAC7-228ENST00000548938 TRAV26-1A0A087WT03 109 aa10.36□□□□□ -0.75
HDAC7-228ENST00000548938 A0A0J9YY99 117 aa10.36□□□□□ -0.75
HDAC7-228ENST00000548938 GNRH2O43555 120 aa10.36□□□□□ -0.75
HDAC7-228ENST00000548938 SPINK8P0C7L1 97 aa10.36□□□□□ -0.75
HDAC7-228ENST00000548938 NDUFA11Q86Y39 141 aa10.36□□□□□ -0.75
HDAC7-228ENST00000548938 TGFAP01135 160 aa10.35□□□□□ -0.75
HDAC7-228ENST00000548938 XGP55808 180 aa10.35□□□□□ -0.75
HDAC7-228ENST00000548938 UNQ9165/PRO28630Q6UXU0 137 aa10.35□□□□□ -0.75
HDAC7-228ENST00000548938 Q6ZS46 218 aa10.35□□□□□ -0.75
HDAC7-228ENST00000548938 OR10J6PQ8NGY7 276 aa10.35□□□□□ -0.75
HDAC7-228ENST00000548938 CARD19Q96LW7 228 aa10.35□□□□□ -0.75
HDAC7-228ENST00000548938 TP53TG1Q9Y2A0 90 aa10.35□□□□□ -0.75
HDAC7-228ENST00000548938 ZFYVE26Q68DK2 2539 aa10.35□□□□□ -0.75
HDAC7-228ENST00000548938 F6UB75 175 aa10.35□□□□□ -0.75
HDAC7-228ENST00000548938 RNASE4P34096 147 aaKnown RBP10.35□□□□□ -0.75
HDAC7-228ENST00000548938 TSPEAR-AS2P59090 65 aa10.35□□□□□ -0.75
HDAC7-228ENST00000548938 LINC00477Q96M19 166 aa10.35□□□□□ -0.75
HDAC7-228ENST00000548938 GEMIN7Q9H840 131 aaKnown RBP10.35□□□□□ -0.75
HDAC7-228ENST00000548938 USP24Q9UPU5 2620 aa10.35□□□□□ -0.75
HDAC7-228ENST00000548938 AKAP6Q13023 2319 aa10.35□□□□□ -0.75
HDAC7-228ENST00000548938 TCL1BO95988 128 aa10.35□□□□□ -0.75
HDAC7-228ENST00000548938 RNASE3P12724 160 aaKnown RBP10.35□□□□□ -0.75
HDAC7-228ENST00000548938 SHISA2Q6UWI4 295 aa10.35□□□□□ -0.75
HDAC7-228ENST00000548938 Q6ZUT4 128 aa10.34□□□□□ -0.75
HDAC7-228ENST00000548938 VPS13CQ709C8 3753 aa10.34□□□□□ -0.75
HDAC7-228ENST00000548938 C19orf84I3L1E1 186 aa10.34□□□□□ -0.75
HDAC7-228ENST00000548938 TRBV12-3P01733 135 aa10.34□□□□□ -0.75
HDAC7-228ENST00000548938 RPL39P62891 51 aaKnown RBP10.34□□□□□ -0.75
HDAC7-228ENST00000548938 TMEM219Q86XT9 240 aa10.34□□□□□ -0.75
HDAC7-228ENST00000548938 UBE2E1P51965 193 aa10.33□□□□□ -0.76
HDAC7-228ENST00000548938 TEN1Q86WV5 123 aa10.33□□□□□ -0.76
HDAC7-228ENST00000548938 PPDPFLQ8WWR9 84 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms