RNA–Protein interactions for RNA: ENST00000547281.5

CDK4-204, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-204ENST00000547281 RAB5CP51148 216 aa11.11□□□□□ -0.63
CDK4-204ENST00000547281 CCL20P78556 96 aa11.11□□□□□ -0.63
CDK4-204ENST00000547281 OR4C5Q8NGB2 326 aa11.11□□□□□ -0.63
CDK4-204ENST00000547281 GNG13Q9P2W3 67 aa11.11□□□□□ -0.63
CDK4-204ENST00000547281 IGKV3D-20A0A0C4DH25 116 aa11.1□□□□□ -0.63
CDK4-204ENST00000547281 A0A1B0GVG6 124 aa11.1□□□□□ -0.63
CDK4-204ENST00000547281 S100A4P26447 101 aaKnown RBP11.1□□□□□ -0.63
CDK4-204ENST00000547281 SULT1A2P50226 295 aa11.1□□□□□ -0.63
CDK4-204ENST00000547281 ZNF876PQ49A33 203 aa11.1□□□□□ -0.63
CDK4-204ENST00000547281 LYPD5Q6UWN5 251 aa11.1□□□□□ -0.63
CDK4-204ENST00000547281 NEGR1Q7Z3B1 354 aa11.1□□□□□ -0.63
CDK4-204ENST00000547281 C9orf62Q8N4C0 152 aa11.1□□□□□ -0.63
CDK4-204ENST00000547281 NHLRC2Q8NBF2 726 aa11.1□□□□□ -0.63
CDK4-204ENST00000547281 PCNPQ8WW12 178 aaKnown RBP11.1□□□□□ -0.63
CDK4-204ENST00000547281 RYR1P21817 5038 aa11.1□□□□□ -0.63
CDK4-204ENST00000547281 TRAV4A0A0B4J268 109 aa11.09□□□□□ -0.63
CDK4-204ENST00000547281 TEX46H3BTG2 121 aa11.09□□□□□ -0.63
CDK4-204ENST00000547281 M0R036 132 aa11.09□□□□□ -0.63
CDK4-204ENST00000547281 SH2D1AO60880 128 aa11.09□□□□□ -0.63
CDK4-204ENST00000547281 CDK2AP2O75956 126 aa11.09□□□□□ -0.63
CDK4-204ENST00000547281 LTAP01374 205 aa11.09□□□□□ -0.63
CDK4-204ENST00000547281 CRIP1P50238 77 aa11.09□□□□□ -0.63
CDK4-204ENST00000547281 LINC00315P59091 139 aa11.09□□□□□ -0.63
CDK4-204ENST00000547281 FAM162BQ5T6X4 162 aa11.09□□□□□ -0.63
CDK4-204ENST00000547281 TRAV9-2A0A087WT02 112 aa11.08□□□□□ -0.64
CDK4-204ENST00000547281 TRAV1-1A0A0B4J248 108 aa11.08□□□□□ -0.64
CDK4-204ENST00000547281 TRBV6-1A0A0K0K1D8 114 aa11.08□□□□□ -0.64
CDK4-204ENST00000547281 B4DEV8 164 aa11.08□□□□□ -0.64
CDK4-204ENST00000547281 SRIP30626 198 aa11.08□□□□□ -0.64
CDK4-204ENST00000547281 ASIPP42127 132 aa11.08□□□□□ -0.64
CDK4-204ENST00000547281 C9orf85Q96MD7 179 aa11.08□□□□□ -0.64
CDK4-204ENST00000547281 MANBALQ9NQG1 85 aa11.08□□□□□ -0.64
CDK4-204ENST00000547281 K7EQD1 137 aa11.07□□□□□ -0.64
CDK4-204ENST00000547281 S100A9P06702 114 aaKnown RBP11.07□□□□□ -0.64
CDK4-204ENST00000547281 RNASE3P12724 160 aaKnown RBP11.07□□□□□ -0.64
CDK4-204ENST00000547281 GYPEP15421 78 aa11.07□□□□□ -0.64
CDK4-204ENST00000547281 TMSB15BA0A087X1C1 80 aa11.06□□□□□ -0.64
CDK4-204ENST00000547281 IGHV3-73A0A0B4J1V6 119 aa11.06□□□□□ -0.64
CDK4-204ENST00000547281 GRIFINA4D1Z8 144 aa11.06□□□□□ -0.64
CDK4-204ENST00000547281 PGPEP1LA6NFU8 196 aa11.06□□□□□ -0.64
CDK4-204ENST00000547281 KRBOX1C9JBD0 128 aa11.06□□□□□ -0.64
CDK4-204ENST00000547281 EREGO14944 169 aa11.06□□□□□ -0.64
CDK4-204ENST00000547281 KRTAP10-2P60368 255 aa11.06□□□□□ -0.64
CDK4-204ENST00000547281 ZNF506Q5JVG8 444 aa11.06□□□□□ -0.64
CDK4-204ENST00000547281 COX8CQ7Z4L0 72 aa11.06□□□□□ -0.64
CDK4-204ENST00000547281 BAGE2Q86Y30 109 aa11.06□□□□□ -0.64
CDK4-204ENST00000547281 MAPKAPK5-AS1Q8N8E1 139 aa11.06□□□□□ -0.64
CDK4-204ENST00000547281 KRTAP4-5Q9BYR2 181 aa11.06□□□□□ -0.64
CDK4-204ENST00000547281 H3BVH4 76 aa11.05□□□□□ -0.64
CDK4-204ENST00000547281 NKX2-5P52952 324 aaPredicted RBP11.05□□□□□ -0.64
CDK4-204ENST00000547281 ZNF674Q2M3X9 581 aa11.05□□□□□ -0.64
CDK4-204ENST00000547281 CFAP126Q5VTH2 177 aa11.05□□□□□ -0.64
CDK4-204ENST00000547281 TXNDC17Q9BRA2 123 aa11.05□□□□□ -0.64
CDK4-204ENST00000547281 TNFRSF18Q9Y5U5 241 aa11.05□□□□□ -0.64
CDK4-204ENST00000547281 LY96Q9Y6Y9 160 aa11.05□□□□□ -0.64
CDK4-204ENST00000547281 RS1O15537 224 aa11.04□□□□□ -0.64
CDK4-204ENST00000547281 RPL35P42766 123 aaKnown RBP11.04□□□□□ -0.64
CDK4-204ENST00000547281 NFE4Q86UQ8 179 aa11.04□□□□□ -0.64
CDK4-204ENST00000547281 LOC100131303A0A0U1RQF7 123 aa11.03□□□□□ -0.64
CDK4-204ENST00000547281 IFNA1P01562 189 aa11.03□□□□□ -0.64
CDK4-204ENST00000547281 ARMS2P0C7Q2 107 aa11.03□□□□□ -0.64
CDK4-204ENST00000547281 EVI2AP22794 236 aa11.03□□□□□ -0.64
CDK4-204ENST00000547281 PRR27Q6MZM9 219 aa11.03□□□□□ -0.64
CDK4-204ENST00000547281 ALKAL2Q6UX46 152 aa11.03□□□□□ -0.64
CDK4-204ENST00000547281 HSPG2P98160 4391 aa11.02□□□□□ -0.64
CDK4-204ENST00000547281 LRP1BQ9NZR2 4599 aa11.02□□□□□ -0.64
CDK4-204ENST00000547281 GATA1P15976 413 aaPredicted RBP11.02□□□□□ -0.65
CDK4-204ENST00000547281 ERVFC1-1P60608 527 aa11.02□□□□□ -0.65
CDK4-204ENST00000547281 LINC01559Q495D7 138 aa11.02□□□□□ -0.65
CDK4-204ENST00000547281 Q6ZRN7 208 aaPredicted RBP11.02□□□□□ -0.65
CDK4-204ENST00000547281 PTH2Q96A98 100 aa11.02□□□□□ -0.65
CDK4-204ENST00000547281 DERL1Q9BUN8 251 aa11.02□□□□□ -0.65
CDK4-204ENST00000547281 PGPEP1Q9NXJ5 209 aa11.02□□□□□ -0.65
CDK4-204ENST00000547281 IL36BQ9NZH7 164 aa11.02□□□□□ -0.65
CDK4-204ENST00000547281 ABCA13Q86UQ4 5058 aa11.01□□□□□ -0.65
CDK4-204ENST00000547281 MEF2BQ02080 365 aaPredicted RBP11.01□□□□□ -0.65
CDK4-204ENST00000547281 SH2D6Q7Z4S9 175 aa11.01□□□□□ -0.65
CDK4-204ENST00000547281 WFDC10BQ8IUB3 73 aa11.01□□□□□ -0.65
CDK4-204ENST00000547281 SLC25A29Q8N8R3 303 aa11.01□□□□□ -0.65
CDK4-204ENST00000547281 C11orf52Q96A22 123 aa11.01□□□□□ -0.65
CDK4-204ENST00000547281 BOLA1Q9Y3E2 137 aa11.01□□□□□ -0.65
CDK4-204ENST00000547281 BCL2P10415 239 aa11□□□□□ -0.65
CDK4-204ENST00000547281 RPL19P84098 196 aaKnown RBP11□□□□□ -0.65
CDK4-204ENST00000547281 CENPWQ5EE01 88 aa11□□□□□ -0.65
CDK4-204ENST00000547281 DMRTA1Q5VZB9 504 aa11□□□□□ -0.65
CDK4-204ENST00000547281 SYT8Q8NBV8 401 aa11□□□□□ -0.65
CDK4-204ENST00000547281 MLST8Q9BVC4 326 aa11□□□□□ -0.65
CDK4-204ENST00000547281 JPT2Q9H910 190 aa11□□□□□ -0.65
CDK4-204ENST00000547281 MED9Q9NWA0 146 aa11□□□□□ -0.65
CDK4-204ENST00000547281 MSRB1Q9NZV6 116 aa11□□□□□ -0.65
CDK4-204ENST00000547281 PHLDA3Q9Y5J5 127 aa11□□□□□ -0.65
CDK4-204ENST00000547281 RAB19A4D1S5 217 aa10.99□□□□□ -0.65
CDK4-204ENST00000547281 A8MWV9 139 aa10.99□□□□□ -0.65
CDK4-204ENST00000547281 K7EP13 123 aa10.99□□□□□ -0.65
CDK4-204ENST00000547281 M0R381 172 aa10.99□□□□□ -0.65
CDK4-204ENST00000547281 PDE6DO43924 150 aa10.99□□□□□ -0.65
CDK4-204ENST00000547281 CIDEAO60543 219 aa10.99□□□□□ -0.65
CDK4-204ENST00000547281 MGST1P10620 155 aaKnown RBP10.99□□□□□ -0.65
CDK4-204ENST00000547281 DNLZQ5SXM8 178 aa10.99□□□□□ -0.65
CDK4-204ENST00000547281 PRADC1Q9BSG0 188 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms