RNA–Protein interactions for RNA: ENST00000546215.5

SCARB1-211, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARB1, Length 1,597 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-211ENST00000546215 ZNF876PQ49A33 203 aa14.62□□□□□ -0.07
SCARB1-211ENST00000546215 POM121L12Q8N7R1 296 aa14.62□□□□□ -0.07
SCARB1-211ENST00000546215 SCRT2Q9NQ03 307 aa14.62□□□□□ -0.07
SCARB1-211ENST00000546215 P01737 135 aa14.61□□□□□ -0.07
SCARB1-211ENST00000546215 FAM74A3Q4VXF1 159 aa14.61□□□□□ -0.07
SCARB1-211ENST00000546215 NUDT10Q8NFP7 164 aa14.61□□□□□ -0.07
SCARB1-211ENST00000546215 NUDT11Q96G61 164 aa14.61□□□□□ -0.07
SCARB1-211ENST00000546215 FAM210BQ96KR6 192 aa14.61□□□□□ -0.07
SCARB1-211ENST00000546215 LINC01551Q86U37 167 aa14.6□□□□□ -0.07
SCARB1-211ENST00000546215 RNASE7Q9H1E1 156 aaKnown RBP14.6□□□□□ -0.07
SCARB1-211ENST00000546215 APLNQ9ULZ1 77 aa14.6□□□□□ -0.07
SCARB1-211ENST00000546215 DNAH1Q9P2D7 4330 aa14.6□□□□□ -0.07
SCARB1-211ENST00000546215 TCTAP57738 103 aa14.6□□□□□ -0.07
SCARB1-211ENST00000546215 TMEM88Q6PEY1 159 aa14.6□□□□□ -0.07
SCARB1-211ENST00000546215 OR2D3Q8NGH3 330 aa14.6□□□□□ -0.07
SCARB1-211ENST00000546215 NDUFAF3Q9BU61 184 aa14.6□□□□□ -0.07
SCARB1-211ENST00000546215 IGHV3-53P01767 116 aa14.59□□□□□ -0.07
SCARB1-211ENST00000546215 MED14OSP0DP75 135 aa14.59□□□□□ -0.07
SCARB1-211ENST00000546215 PIK3CD-AS1Q5SR53 167 aa14.59□□□□□ -0.07
SCARB1-211ENST00000546215 ZNF479Q96JC4 524 aa14.59□□□□□ -0.07
SCARB1-211ENST00000546215 SACSQ9NZJ4 4579 aa14.59□□□□□ -0.07
SCARB1-211ENST00000546215 NACAE9PAV3 2078 aa14.58□□□□□ -0.07
SCARB1-211ENST00000546215 TRAV4A0A0B4J268 109 aa14.58□□□□□ -0.08
SCARB1-211ENST00000546215 SFTA3P0C7M3 94 aa14.58□□□□□ -0.08
SCARB1-211ENST00000546215 TMEM241Q24JQ0 296 aa14.58□□□□□ -0.08
SCARB1-211ENST00000546215 SOHLH1Q5JUK2 328 aa14.58□□□□□ -0.08
SCARB1-211ENST00000546215 DMRTA1Q5VZB9 504 aa14.58□□□□□ -0.08
SCARB1-211ENST00000546215 SSBP4Q9BWG4 385 aaPredicted RBP14.58□□□□□ -0.08
SCARB1-211ENST00000546215 PHLDA3Q9Y5J5 127 aa14.58□□□□□ -0.08
SCARB1-211ENST00000546215 SNAI2O43623 268 aa14.57□□□□□ -0.08
SCARB1-211ENST00000546215 GZMBP10144 247 aa14.57□□□□□ -0.08
SCARB1-211ENST00000546215 RPS20P60866 119 aaKnown RBP14.57□□□□□ -0.08
SCARB1-211ENST00000546215 FAM231DQ6ZW35 169 aa14.57□□□□□ -0.08
SCARB1-211ENST00000546215 OR4C5Q8NGB2 326 aa14.57□□□□□ -0.08
SCARB1-211ENST00000546215 ALMS1Q8TCU4 4167 aa14.57□□□□□ -0.08
SCARB1-211ENST00000546215 FHL2Q14192 279 aa14.56□□□□□ -0.08
SCARB1-211ENST00000546215 RS1O15537 224 aa14.56□□□□□ -0.08
SCARB1-211ENST00000546215 OR5AL1P0C617 328 aa14.56□□□□□ -0.08
SCARB1-211ENST00000546215 CFAP126Q5VTH2 177 aa14.56□□□□□ -0.08
SCARB1-211ENST00000546215 RPP21Q9H633 154 aaKnown RBP14.56□□□□□ -0.08
SCARB1-211ENST00000546215 NAT8Q9UHE5 227 aa14.56□□□□□ -0.08
SCARB1-211ENST00000546215 VPS13DQ5THJ4 4388 aa14.55□□□□□ -0.08
SCARB1-211ENST00000546215 TRAV26-1A0A087WT03 109 aa14.55□□□□□ -0.08
SCARB1-211ENST00000546215 XKRY2A2RUG3 117 aa14.55□□□□□ -0.08
SCARB1-211ENST00000546215 IGLC6P0CF74 106 aa14.55□□□□□ -0.08
SCARB1-211ENST00000546215 ERVFC1-1P60608 527 aa14.55□□□□□ -0.08
SCARB1-211ENST00000546215 RPL23P62829 140 aaKnown RBP14.55□□□□□ -0.08
SCARB1-211ENST00000546215 SYT8Q8NBV8 401 aa14.55□□□□□ -0.08
SCARB1-211ENST00000546215 ZFP82Q8N141 532 aa14.54□□□□□ -0.08
SCARB1-211ENST00000546215 OR10AG1Q8NH19 301 aa14.54□□□□□ -0.08
SCARB1-211ENST00000546215 M0R381 172 aa14.53□□□□□ -0.08
SCARB1-211ENST00000546215 NXPH4O95158 308 aa14.53□□□□□ -0.08
SCARB1-211ENST00000546215 JPT2Q9H910 190 aa14.53□□□□□ -0.08
SCARB1-211ENST00000546215 HHLA3Q9XRX5 114 aa14.53□□□□□ -0.08
SCARB1-211ENST00000546215 TRGV4A0A0C4DH28 118 aa14.52□□□□□ -0.08
SCARB1-211ENST00000546215 A0A0J9YY99 117 aa14.52□□□□□ -0.08
SCARB1-211ENST00000546215 A8MWV9 139 aa14.52□□□□□ -0.08
SCARB1-211ENST00000546215 GATCO43716 136 aaKnown RBP14.52□□□□□ -0.08
SCARB1-211ENST00000546215 SLAQ13239 276 aa14.52□□□□□ -0.08
SCARB1-211ENST00000546215 FER1L6-AS1Q8NA97 138 aa14.52□□□□□ -0.08
SCARB1-211ENST00000546215 C15orf53Q8NAA6 179 aa14.52□□□□□ -0.08
SCARB1-211ENST00000546215 ISOC2Q96AB3 205 aa14.52□□□□□ -0.08
SCARB1-211ENST00000546215 VSIG2Q96IQ7 327 aa14.52□□□□□ -0.08
SCARB1-211ENST00000546215 PRO0255Q9UI72 69 aa14.52□□□□□ -0.08
SCARB1-211ENST00000546215 H3BNG1 76 aa14.51□□□□□ -0.09
SCARB1-211ENST00000546215 CRYBA4P53673 196 aa14.51□□□□□ -0.09
SCARB1-211ENST00000546215 UQCC3Q6UW78 93 aa14.51□□□□□ -0.09
SCARB1-211ENST00000546215 OSTCQ9NRP0 149 aa14.51□□□□□ -0.09
SCARB1-211ENST00000546215 MUC21A0A0G2JKD1 596 aa14.51□□□□□ -0.09
SCARB1-211ENST00000546215 MUC21A0A140T8X8 626 aa14.51□□□□□ -0.09
SCARB1-211ENST00000546215 CIDEAO60543 219 aa14.51□□□□□ -0.09
SCARB1-211ENST00000546215 ADIRFQ15847 76 aa14.51□□□□□ -0.09
SCARB1-211ENST00000546215 SFRP2Q96HF1 295 aa14.51□□□□□ -0.09
SCARB1-211ENST00000546215 TPPP3Q9BW30 176 aa14.51□□□□□ -0.09
SCARB1-211ENST00000546215 SAMD10Q9BYL1 202 aa14.51□□□□□ -0.09
SCARB1-211ENST00000546215 A0A1W2PPQ1 181 aa14.5□□□□□ -0.09
SCARB1-211ENST00000546215 LINC00862A6NCI5 91 aa14.5□□□□□ -0.09
SCARB1-211ENST00000546215 CT83Q5H943 113 aa14.5□□□□□ -0.09
SCARB1-211ENST00000546215 UFSP1Q6NVU6 142 aa14.5□□□□□ -0.09
SCARB1-211ENST00000546215 IGHV3-73A0A0B4J1V6 119 aa14.49□□□□□ -0.09
SCARB1-211ENST00000546215 PAX4O43316 350 aa14.49□□□□□ -0.09
SCARB1-211ENST00000546215 GATA1P15976 413 aaPredicted RBP14.49□□□□□ -0.09
SCARB1-211ENST00000546215 SPANXN1Q5VSR9 72 aa14.49□□□□□ -0.09
SCARB1-211ENST00000546215 LYZL1Q6UWQ5 148 aa14.49□□□□□ -0.09
SCARB1-211ENST00000546215 ZFP2Q6ZN57 461 aa14.49□□□□□ -0.09
SCARB1-211ENST00000546215 GTSF1Q8WW33 167 aa14.49□□□□□ -0.09
SCARB1-211ENST00000546215 LINC00476Q8WZB0 136 aa14.49□□□□□ -0.09
SCARB1-211ENST00000546215 HYDINQ4G0P3 5121 aa14.48□□□□□ -0.09
SCARB1-211ENST00000546215 LCE6AA0A183 80 aa14.48□□□□□ -0.09
SCARB1-211ENST00000546215 A8MWL6 223 aa14.48□□□□□ -0.09
SCARB1-211ENST00000546215 F2Z2F3 143 aa14.48□□□□□ -0.09
SCARB1-211ENST00000546215 NUDT3O95989 172 aa14.48□□□□□ -0.09
SCARB1-211ENST00000546215 SSTP61278 116 aa14.48□□□□□ -0.09
SCARB1-211ENST00000546215 COMMD7Q86VX2 200 aa14.48□□□□□ -0.09
SCARB1-211ENST00000546215 CRYGDP07320 174 aa14.47□□□□□ -0.09
SCARB1-211ENST00000546215 CTRLP40313 264 aa14.47□□□□□ -0.09
SCARB1-211ENST00000546215 LGALS9CQ6DKI2 356 aa14.47□□□□□ -0.09
SCARB1-211ENST00000546215 C15orf54Q8N8G6 183 aa14.47□□□□□ -0.09
SCARB1-211ENST00000546215 V9GYV3 84 aa14.47□□□□□ -0.09
SCARB1-211ENST00000546215 KMT2AQ03164 3969 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms