RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 ZNF506Q5JVG8 444 aa7.67□□□□□ -1.18
DDB1-222ENST00000543627 DERL1Q9BUN8 251 aa7.67□□□□□ -1.18
DDB1-222ENST00000543627 Q9H8V8 135 aa7.67□□□□□ -1.18
DDB1-222ENST00000543627 TRBV6-1A0A0K0K1D8 114 aa7.66□□□□□ -1.18
DDB1-222ENST00000543627 LOC100131303A0A0U1RQF7 123 aa7.66□□□□□ -1.18
DDB1-222ENST00000543627 H3BNG1 76 aa7.66□□□□□ -1.18
DDB1-222ENST00000543627 SRIP30626 198 aa7.66□□□□□ -1.18
DDB1-222ENST00000543627 CEBPGP53567 150 aa7.66□□□□□ -1.18
DDB1-222ENST00000543627 RPL19P84098 196 aaKnown RBP7.66□□□□□ -1.18
DDB1-222ENST00000543627 MRPL23Q16540 153 aaKnown RBP7.66□□□□□ -1.18
DDB1-222ENST00000543627 ZNF674Q2M3X9 581 aa7.66□□□□□ -1.18
DDB1-222ENST00000543627 CFAP126Q5VTH2 177 aa7.66□□□□□ -1.18
DDB1-222ENST00000543627 C9orf85Q96MD7 179 aa7.66□□□□□ -1.18
DDB1-222ENST00000543627 PHLDA3Q9Y5J5 127 aa7.66□□□□□ -1.18
DDB1-222ENST00000543627 MUC4Q99102 2169 aa7.66□□□□□ -1.18
DDB1-222ENST00000543627 K7EQD1 137 aa7.65□□□□□ -1.18
DDB1-222ENST00000543627 M0R381 172 aa7.65□□□□□ -1.18
DDB1-222ENST00000543627 RS1O15537 224 aa7.65□□□□□ -1.18
DDB1-222ENST00000543627 FAM3BP58499 235 aaPredicted RBP7.65□□□□□ -1.18
DDB1-222ENST00000543627 BLOC1S1P78537 153 aa7.65□□□□□ -1.18
DDB1-222ENST00000543627 MEF2BQ02080 365 aaPredicted RBP7.65□□□□□ -1.18
DDB1-222ENST00000543627 CENPWQ5EE01 88 aa7.65□□□□□ -1.18
DDB1-222ENST00000543627 SYT8Q8NBV8 401 aa7.65□□□□□ -1.18
DDB1-222ENST00000543627 ZNRF2Q8NHG8 242 aa7.65□□□□□ -1.18
DDB1-222ENST00000543627 DAZAP1Q96EP5 407 aaKnown RBP7.65□□□□□ -1.18
DDB1-222ENST00000543627 JPT2Q9H910 190 aa7.65□□□□□ -1.18
DDB1-222ENST00000543627 VAX2Q9UIW0 290 aa7.65□□□□□ -1.18
DDB1-222ENST00000543627 MUC21A0A0G2JKD1 596 aa7.64□□□□□ -1.19
DDB1-222ENST00000543627 NBDYA0A0U1RRE5 68 aa7.64□□□□□ -1.19
DDB1-222ENST00000543627 MUC21A0A140T8X8 626 aa7.64□□□□□ -1.19
DDB1-222ENST00000543627 PDE6DO43924 150 aa7.64□□□□□ -1.19
DDB1-222ENST00000543627 BCL2P10415 239 aa7.64□□□□□ -1.19
DDB1-222ENST00000543627 GNG4P50150 75 aa7.64□□□□□ -1.19
DDB1-222ENST00000543627 C1orf134Q5TEV5 83 aa7.64□□□□□ -1.19
DDB1-222ENST00000543627 FAM74A4Q5TZK3 123 aa7.64□□□□□ -1.19
DDB1-222ENST00000543627 DMRTA1Q5VZB9 504 aa7.64□□□□□ -1.19
DDB1-222ENST00000543627 NEGR1Q7Z3B1 354 aa7.64□□□□□ -1.19
DDB1-222ENST00000543627 TXNDC17Q9BRA2 123 aa7.64□□□□□ -1.19
DDB1-222ENST00000543627 PRADC1Q9BSG0 188 aa7.64□□□□□ -1.19
DDB1-222ENST00000543627 IL36BQ9NZH7 164 aa7.64□□□□□ -1.19
DDB1-222ENST00000543627 LINC01559Q495D7 138 aa7.63□□□□□ -1.19
DDB1-222ENST00000543627 SOHLH1Q5JUK2 328 aa7.63□□□□□ -1.19
DDB1-222ENST00000543627 LYPD5Q6UWN5 251 aa7.63□□□□□ -1.19
DDB1-222ENST00000543627 COX8CQ7Z4L0 72 aa7.63□□□□□ -1.19
DDB1-222ENST00000543627 SLC25A29Q8N8R3 303 aa7.63□□□□□ -1.19
DDB1-222ENST00000543627 TPPP3Q9BW30 176 aa7.63□□□□□ -1.19
DDB1-222ENST00000543627 MRPS16Q9Y3D3 137 aaKnown RBP7.63□□□□□ -1.19
DDB1-222ENST00000543627 BIRC6Q9NR09 4857 aa7.62□□□□□ -1.19
DDB1-222ENST00000543627 A0A087WWL8 130 aa7.62□□□□□ -1.19
DDB1-222ENST00000543627 RBFOX3A6NFN3 312 aa7.62□□□□□ -1.19
DDB1-222ENST00000543627 PRSS29PA6NIE9 313 aa7.62□□□□□ -1.19
DDB1-222ENST00000543627 A8MWV9 139 aa7.62□□□□□ -1.19
DDB1-222ENST00000543627 NXPH4O95158 308 aa7.62□□□□□ -1.19
DDB1-222ENST00000543627 GATA1P15976 413 aaPredicted RBP7.62□□□□□ -1.19
DDB1-222ENST00000543627 C11orf52Q96A22 123 aa7.62□□□□□ -1.19
DDB1-222ENST00000543627 MLST8Q9BVC4 326 aa7.62□□□□□ -1.19
DDB1-222ENST00000543627 SAMD10Q9BYL1 202 aa7.62□□□□□ -1.19
DDB1-222ENST00000543627 EIF5A2Q9GZV4 153 aaKnown RBP7.62□□□□□ -1.19
DDB1-222ENST00000543627 EPPK1P58107 5090 aaKnown RBP7.61□□□□□ -1.19
DDB1-222ENST00000543627 GAGE12JA6NER3 117 aa7.61□□□□□ -1.19
DDB1-222ENST00000543627 SIVA1O15304 175 aa7.61□□□□□ -1.19
DDB1-222ENST00000543627 GZMBP10144 247 aa7.61□□□□□ -1.19
DDB1-222ENST00000543627 GAGE1Q13065 139 aa7.61□□□□□ -1.19
DDB1-222ENST00000543627 GAGE4Q13068 117 aa7.61□□□□□ -1.19
DDB1-222ENST00000543627 GAGE5Q13069 117 aa7.61□□□□□ -1.19
DDB1-222ENST00000543627 RHOHQ15669 191 aa7.61□□□□□ -1.19
DDB1-222ENST00000543627 GAGE13Q4V321 117 aa7.61□□□□□ -1.19
DDB1-222ENST00000543627 SPANXN1Q5VSR9 72 aa7.61□□□□□ -1.19
DDB1-222ENST00000543627 Q6ZR54 194 aa7.61□□□□□ -1.19
DDB1-222ENST00000543627 Q6ZSN1 163 aa7.61□□□□□ -1.19
DDB1-222ENST00000543627 ZFP82Q8N141 532 aa7.61□□□□□ -1.19
DDB1-222ENST00000543627 OR2D3Q8NGH3 330 aa7.61□□□□□ -1.19
DDB1-222ENST00000543627 PARLQ9H300 379 aa7.61□□□□□ -1.19
DDB1-222ENST00000543627 RTL8CO15255 209 aa7.6□□□□□ -1.19
DDB1-222ENST00000543627 CIDEAO60543 219 aa7.6□□□□□ -1.19
DDB1-222ENST00000543627 TAGLN2P37802 199 aaKnown RBP7.6□□□□□ -1.19
DDB1-222ENST00000543627 TOR2AQ5JU69 321 aa7.6□□□□□ -1.19
DDB1-222ENST00000543627 LINC00336Q6ZUF6 198 aa7.6□□□□□ -1.19
DDB1-222ENST00000543627 C6orf223Q8N319 242 aa7.6□□□□□ -1.19
DDB1-222ENST00000543627 PTH2Q96A98 100 aa7.6□□□□□ -1.19
DDB1-222ENST00000543627 DNAH10Q8IVF4 4471 aa7.6□□□□□ -1.19
DDB1-222ENST00000543627 DNAH6Q9C0G6 4158 aa7.59□□□□□ -1.19
DDB1-222ENST00000543627 TRBV6-4A0A1B0GX49 114 aa7.59□□□□□ -1.19
DDB1-222ENST00000543627 IGLV2-8P01709 118 aa7.59□□□□□ -1.19
DDB1-222ENST00000543627 P01737 135 aa7.59□□□□□ -1.19
DDB1-222ENST00000543627 OR10J3Q5JRS4 329 aa7.59□□□□□ -1.19
DDB1-222ENST00000543627 DNLZQ5SXM8 178 aa7.59□□□□□ -1.19
DDB1-222ENST00000543627 ZNF575Q86XF7 245 aa7.59□□□□□ -1.19
DDB1-222ENST00000543627 C14orf178Q8N769 122 aaPredicted RBP7.59□□□□□ -1.19
DDB1-222ENST00000543627 OR10AG1Q8NH19 301 aa7.59□□□□□ -1.19
DDB1-222ENST00000543627 UPK3BQ9BT76 320 aa7.59□□□□□ -1.19
DDB1-222ENST00000543627 F5H697 171 aa7.58□□□□□ -1.2
DDB1-222ENST00000543627 ZNF56Q15929 161 aa7.58□□□□□ -1.2
DDB1-222ENST00000543627 TTC32Q5I0X7 151 aa7.58□□□□□ -1.2
DDB1-222ENST00000543627 WFDC10BQ8IUB3 73 aa7.58□□□□□ -1.2
DDB1-222ENST00000543627 ATP6V0E2Q8NHE4 81 aa7.58□□□□□ -1.2
DDB1-222ENST00000543627 OCC1Q8TAD7 63 aa7.58□□□□□ -1.2
DDB1-222ENST00000543627 SFRP2Q96HF1 295 aa7.58□□□□□ -1.2
DDB1-222ENST00000543627 SCRT2Q9NQ03 307 aa7.58□□□□□ -1.2
DDB1-222ENST00000543627 BIN3Q9NQY0 253 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms