RNA–Protein interactions for RNA: ENST00000543415.5

GTF2H3-213, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 5

Gene GTF2H3, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-213ENST00000543415 ZFC3H1O60293 1989 aaKnown RBP2□□□□□ -2.09
GTF2H3-213ENST00000543415 TRAV23DV6A0A075B6W5 121 aa2□□□□□ -2.09
GTF2H3-213ENST00000543415 TRBV10-3A0A0K0K1G6 114 aa2□□□□□ -2.09
GTF2H3-213ENST00000543415 HIGD1CA8MV81 97 aa2□□□□□ -2.09
GTF2H3-213ENST00000543415 MRPS14O60783 128 aaKnown RBP2□□□□□ -2.09
GTF2H3-213ENST00000543415 SLC25A6P12236 298 aa2□□□□□ -2.09
GTF2H3-213ENST00000543415 UBE2G1P62253 170 aa2□□□□□ -2.09
GTF2H3-213ENST00000543415 SPATA45Q537H7 98 aa2□□□□□ -2.09
GTF2H3-213ENST00000543415 Q6ZS92 163 aa2□□□□□ -2.09
GTF2H3-213ENST00000543415 SPACA4Q8TDM5 124 aa2□□□□□ -2.09
GTF2H3-213ENST00000543415 DPY30Q9C005 99 aa2□□□□□ -2.09
GTF2H3-213ENST00000543415 WFDC10AQ9H1F0 79 aa2□□□□□ -2.09
GTF2H3-213ENST00000543415 V9GYS6 101 aa2□□□□□ -2.09
GTF2H3-213ENST00000543415 ERICH3Q5RHP9 1530 aa2□□□□□ -2.09
GTF2H3-213ENST00000543415 LINC00322Q6ZN03 302 aaPredicted RBP1.99□□□□□ -2.09
GTF2H3-213ENST00000543415 C5orf38Q86SI9 138 aa1.99□□□□□ -2.09
GTF2H3-213ENST00000543415 SPTSSBQ8NFR3 76 aa1.99□□□□□ -2.09
GTF2H3-213ENST00000543415 MRPL35Q9NZE8 188 aaKnown RBP1.99□□□□□ -2.09
GTF2H3-213ENST00000543415 C22orf24Q9Y442 160 aa1.99□□□□□ -2.09
GTF2H3-213ENST00000543415 CCDC88CQ9P219 2028 aa1.99□□□□□ -2.09
GTF2H3-213ENST00000543415 ADGRB1O14514 1584 aa1.98□□□□□ -2.09
GTF2H3-213ENST00000543415 NRKQ7Z2Y5 1582 aa1.98□□□□□ -2.09
GTF2H3-213ENST00000543415 LAMB4A4D0S4 1761 aa1.98□□□□□ -2.09
GTF2H3-213ENST00000543415 OOSP1A8MZH6 123 aa1.98□□□□□ -2.09
GTF2H3-213ENST00000543415 IGHV3-30P01768 117 aa1.98□□□□□ -2.09
GTF2H3-213ENST00000543415 IGKCP01834 107 aa1.98□□□□□ -2.09
GTF2H3-213ENST00000543415 IGHV3-30-5P0DP03 117 aa1.98□□□□□ -2.09
GTF2H3-213ENST00000543415 CYP2G1PQ6ZSU1 146 aa1.98□□□□□ -2.09
GTF2H3-213ENST00000543415 C10orf105Q8TEF2 133 aa1.98□□□□□ -2.09
GTF2H3-213ENST00000543415 ZNF609O15014 1411 aa1.98□□□□□ -2.09
GTF2H3-213ENST00000543415 COL11A1P12107 1806 aaPredicted RBP1.98□□□□□ -2.09
GTF2H3-213ENST00000543415 MYH9P35579 1960 aaKnown RBP1.98□□□□□ -2.09
GTF2H3-213ENST00000543415 BAZ1AQ9NRL2 1556 aaPredicted RBP1.98□□□□□ -2.09
GTF2H3-213ENST00000543415 PHLPP1O60346 1717 aa1.97□□□□□ -2.09
GTF2H3-213ENST00000543415 PLXNA3P51805 1871 aa1.97□□□□□ -2.09
GTF2H3-213ENST00000543415 INE1O15225 51 aa1.97□□□□□ -2.09
GTF2H3-213ENST00000543415 KRTAP5-8O75690 187 aa1.97□□□□□ -2.09
GTF2H3-213ENST00000543415 CCKP06307 115 aa1.97□□□□□ -2.09
GTF2H3-213ENST00000543415 PRB4P10163 310 aaPredicted RBP1.97□□□□□ -2.09
GTF2H3-213ENST00000543415 UBA52P62987 128 aaKnown RBP1.97□□□□□ -2.09
GTF2H3-213ENST00000543415 RBM3P98179 157 aaKnown RBP1.97□□□□□ -2.09
GTF2H3-213ENST00000543415 LSM10Q969L4 123 aaKnown RBP1.97□□□□□ -2.09
GTF2H3-213ENST00000543415 MYO9BQ13459 2157 aa1.97□□□□□ -2.09
GTF2H3-213ENST00000543415 MYH1P12882 1939 aa1.97□□□□□ -2.09
GTF2H3-213ENST00000543415 THOC2Q8NI27 1593 aaKnown RBP1.97□□□□□ -2.09
GTF2H3-213ENST00000543415 HEATR5BQ9P2D3 2071 aa1.96□□□□□ -2.1
GTF2H3-213ENST00000543415 IGKV2-40A0A087WW87 121 aaPredicted RBP1.96□□□□□ -2.1
GTF2H3-213ENST00000543415 TRBV6-7A0A0A0MS04 114 aa1.96□□□□□ -2.1
GTF2H3-213ENST00000543415 TRAV13-2A0A0B4J235 113 aa1.96□□□□□ -2.1
GTF2H3-213ENST00000543415 IGKV3D-7A0A0C4DH55 119 aa1.96□□□□□ -2.1
GTF2H3-213ENST00000543415 IGKV3OR2-268A0A0C4DH90 116 aa1.96□□□□□ -2.1
GTF2H3-213ENST00000543415 TEX49A0A1B0GTD5 131 aa1.96□□□□□ -2.1
GTF2H3-213ENST00000543415 NUPR2A6NF83 97 aa1.96□□□□□ -2.1
GTF2H3-213ENST00000543415 M0R2N4 97 aa1.96□□□□□ -2.1
GTF2H3-213ENST00000543415 IGKV2D-40P01614 121 aaPredicted RBP1.96□□□□□ -2.1
GTF2H3-213ENST00000543415 RNASE3P12724 160 aaKnown RBP1.96□□□□□ -2.1
GTF2H3-213ENST00000543415 FAM74A4Q5TZK3 123 aa1.96□□□□□ -2.1
GTF2H3-213ENST00000543415 GDF5OSQ5U4N7 250 aa1.96□□□□□ -2.1
GTF2H3-213ENST00000543415 CSAG1Q6PB30 78 aa1.96□□□□□ -2.1
GTF2H3-213ENST00000543415 COMMD6Q7Z4G1 85 aa1.96□□□□□ -2.1
GTF2H3-213ENST00000543415 CYP4F30PQ9H0H9 118 aa1.96□□□□□ -2.1
GTF2H3-213ENST00000543415 USP54Q70EL1 1684 aa1.96□□□□□ -2.1
GTF2H3-213ENST00000543415 FREM3P0C091 2139 aa1.96□□□□□ -2.1
GTF2H3-213ENST00000543415 HELZP42694 1942 aaKnown RBP1.95□□□□□ -2.1
GTF2H3-213ENST00000543415 MYH13Q9UKX3 1938 aa1.95□□□□□ -2.1
GTF2H3-213ENST00000543415 IFT140Q96RY7 1462 aa1.95□□□□□ -2.1
GTF2H3-213ENST00000543415 TRAV12-3A0A0B4J271 114 aa1.95□□□□□ -2.1
GTF2H3-213ENST00000543415 NAP1L6A6NFF2 107 aa1.95□□□□□ -2.1
GTF2H3-213ENST00000543415 PDE6GP18545 87 aa1.95□□□□□ -2.1
GTF2H3-213ENST00000543415 SNCAP37840 140 aa1.95□□□□□ -2.1
GTF2H3-213ENST00000543415 CCL8P80075 99 aa1.95□□□□□ -2.1
GTF2H3-213ENST00000543415 PP632Q6XCG6 107 aa1.95□□□□□ -2.1
GTF2H3-213ENST00000543415 ZNF818PQ6ZRF7 136 aa1.95□□□□□ -2.1
GTF2H3-213ENST00000543415 Q8N8P6 123 aa1.95□□□□□ -2.1
GTF2H3-213ENST00000543415 VAMP8Q9BV40 100 aa1.95□□□□□ -2.1
GTF2H3-213ENST00000543415 SCP2D1Q9UJQ7 156 aa1.95□□□□□ -2.1
GTF2H3-213ENST00000543415 SDK2Q58EX2 2172 aa1.95□□□□□ -2.1
GTF2H3-213ENST00000543415 GAPVD1Q14C86 1478 aa1.94□□□□□ -2.1
GTF2H3-213ENST00000543415 COL24A1Q17RW2 1714 aa1.94□□□□□ -2.1
GTF2H3-213ENST00000543415 FOCADQ5VW36 1801 aa1.94□□□□□ -2.1
GTF2H3-213ENST00000543415 CEP162Q5TB80 1403 aa1.94□□□□□ -2.1
GTF2H3-213ENST00000543415 CTTNBP2Q8WZ74 1663 aa1.94□□□□□ -2.1
GTF2H3-213ENST00000543415 MYH6P13533 1939 aa1.94□□□□□ -2.1
GTF2H3-213ENST00000543415 CXorf51AA0A1B0GTR3 108 aa1.94□□□□□ -2.1
GTF2H3-213ENST00000543415 SPRR5A0A1B0GTR4 108 aa1.94□□□□□ -2.1
GTF2H3-213ENST00000543415 IFI27L1Q96BM0 104 aa1.94□□□□□ -2.1
GTF2H3-213ENST00000543415 KDM6BO15054 1643 aa1.94□□□□□ -2.1
GTF2H3-213ENST00000543415 COL4A2P08572 1712 aa1.94□□□□□ -2.1
GTF2H3-213ENST00000543415 POLA1P09884 1462 aaPredicted RBP1.94□□□□□ -2.1
GTF2H3-213ENST00000543415 ZSWIM8A7E2V4 1837 aa1.94□□□□□ -2.1
GTF2H3-213ENST00000543415 SHANK1Q9Y566 2161 aa1.93□□□□□ -2.1
GTF2H3-213ENST00000543415 LAMB2P55268 1798 aa1.93□□□□□ -2.1
GTF2H3-213ENST00000543415 ZFYVE16Q7Z3T8 1539 aa1.93□□□□□ -2.1
GTF2H3-213ENST00000543415 GNG11P61952 73 aa1.93□□□□□ -2.1
GTF2H3-213ENST00000543415 INSL4Q14641 139 aa1.93□□□□□ -2.1
GTF2H3-213ENST00000543415 SBSPONQ8IVN8 264 aa1.93□□□□□ -2.1
GTF2H3-213ENST00000543415 DSCR8Q96T75 97 aa1.93□□□□□ -2.1
GTF2H3-213ENST00000543415 CYSTM1Q9H1C7 97 aa1.93□□□□□ -2.1
GTF2H3-213ENST00000543415 DPH3P1Q9H4G8 78 aa1.93□□□□□ -2.1
GTF2H3-213ENST00000543415 BET1LQ9NYM9 111 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms