RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 SOHLH1Q5JUK2 328 aa6.77□□□□□ -1.33
TNFRSF1A-214ENST00000543048 TMEM183AQ8IXX5 376 aa6.77□□□□□ -1.33
TNFRSF1A-214ENST00000543048 SGK494Q96LW2 274 aa6.77□□□□□ -1.33
TNFRSF1A-214ENST00000543048 NDFIP1Q9BT67 221 aa6.77□□□□□ -1.33
TNFRSF1A-214ENST00000543048 MRPL16Q9NX20 251 aaKnown RBP6.77□□□□□ -1.33
TNFRSF1A-214ENST00000543048 PSG8Q9UQ74 426 aa6.77□□□□□ -1.33
TNFRSF1A-214ENST00000543048 FBLL1A6NHQ2 334 aaKnown RBP6.76□□□□□ -1.33
TNFRSF1A-214ENST00000543048 F8W036 122 aa6.76□□□□□ -1.33
TNFRSF1A-214ENST00000543048 PEX7O00628 323 aa6.76□□□□□ -1.33
TNFRSF1A-214ENST00000543048 RTL8CO15255 209 aa6.76□□□□□ -1.33
TNFRSF1A-214ENST00000543048 ADCYAP1P18509 176 aa6.76□□□□□ -1.33
TNFRSF1A-214ENST00000543048 CEBPGP53567 150 aa6.76□□□□□ -1.33
TNFRSF1A-214ENST00000543048 ESRGQ1W209 222 aa6.76□□□□□ -1.33
TNFRSF1A-214ENST00000543048 SAPCD1Q5SSQ6 148 aa6.76□□□□□ -1.33
TNFRSF1A-214ENST00000543048 ZNRF2Q8NHG8 242 aa6.76□□□□□ -1.33
TNFRSF1A-214ENST00000543048 RASL10AQ92737 203 aa6.76□□□□□ -1.33
TNFRSF1A-214ENST00000543048 HIST1H2BAQ96A08 127 aa6.76□□□□□ -1.33
TNFRSF1A-214ENST00000543048 VSIG2Q96IQ7 327 aa6.76□□□□□ -1.33
TNFRSF1A-214ENST00000543048 KCNS1Q96KK3 526 aa6.76□□□□□ -1.33
TNFRSF1A-214ENST00000543048 SEC11CQ9BY50 192 aa6.76□□□□□ -1.33
TNFRSF1A-214ENST00000543048 NAGKQ9UJ70 344 aa6.76□□□□□ -1.33
TNFRSF1A-214ENST00000543048 CARHSP1Q9Y2V2 147 aaKnown RBP6.76□□□□□ -1.33
TNFRSF1A-214ENST00000543048 FAT2Q9NYQ8 4349 aa6.75□□□□□ -1.33
TNFRSF1A-214ENST00000543048 PRSS29PA6NIE9 313 aa6.75□□□□□ -1.33
TNFRSF1A-214ENST00000543048 IGLV2-11P01706 119 aa6.75□□□□□ -1.33
TNFRSF1A-214ENST00000543048 IGHV3-53P01767 116 aa6.75□□□□□ -1.33
TNFRSF1A-214ENST00000543048 AKR1C3P42330 323 aa6.75□□□□□ -1.33
TNFRSF1A-214ENST00000543048 FLI1Q01543 452 aaPredicted RBP6.75□□□□□ -1.33
TNFRSF1A-214ENST00000543048 FHL2Q14192 279 aa6.75□□□□□ -1.33
TNFRSF1A-214ENST00000543048 FAM74A3Q4VXF1 159 aa6.75□□□□□ -1.33
TNFRSF1A-214ENST00000543048 SMUG1Q53HV7 270 aa6.75□□□□□ -1.33
TNFRSF1A-214ENST00000543048 C10orf91Q5T1B1 145 aa6.75□□□□□ -1.33
TNFRSF1A-214ENST00000543048 C1orf134Q5TEV5 83 aa6.75□□□□□ -1.33
TNFRSF1A-214ENST00000543048 PRNTQ86SH4 94 aa6.75□□□□□ -1.33
TNFRSF1A-214ENST00000543048 TMEM75Q8N9X5 138 aa6.75□□□□□ -1.33
TNFRSF1A-214ENST00000543048 SMIM7Q9BQ49 75 aa6.75□□□□□ -1.33
TNFRSF1A-214ENST00000543048 PARLQ9H300 379 aa6.75□□□□□ -1.33
TNFRSF1A-214ENST00000543048 Q9H8V8 135 aa6.75□□□□□ -1.33
TNFRSF1A-214ENST00000543048 SDF2L1Q9HCN8 221 aa6.75□□□□□ -1.33
TNFRSF1A-214ENST00000543048 PRO0255Q9UI72 69 aa6.75□□□□□ -1.33
TNFRSF1A-214ENST00000543048 HHLA3Q9XRX5 114 aa6.75□□□□□ -1.33
TNFRSF1A-214ENST00000543048 PKD1P98161 4303 aa6.75□□□□□ -1.33
TNFRSF1A-214ENST00000543048 A0A096LPF7 62 aa6.74□□□□□ -1.33
TNFRSF1A-214ENST00000543048 TRGV4A0A0C4DH28 118 aa6.74□□□□□ -1.33
TNFRSF1A-214ENST00000543048 IGHV3-16A0A0C4DH30 117 aa6.74□□□□□ -1.33
TNFRSF1A-214ENST00000543048 NBDYA0A0U1RRE5 68 aa6.74□□□□□ -1.33
TNFRSF1A-214ENST00000543048 ZNF727A8MUV8 499 aa6.74□□□□□ -1.33
TNFRSF1A-214ENST00000543048 M0R2P5 195 aa6.74□□□□□ -1.33
TNFRSF1A-214ENST00000543048 GCGP01275 180 aa6.74□□□□□ -1.33
TNFRSF1A-214ENST00000543048 TYMSP04818 313 aa6.74□□□□□ -1.33
TNFRSF1A-214ENST00000543048 ZNF80P51504 273 aaPredicted RBP6.74□□□□□ -1.33
TNFRSF1A-214ENST00000543048 CRYBA4P53673 196 aa6.74□□□□□ -1.33
TNFRSF1A-214ENST00000543048 ZNF674Q2M3X9 581 aa6.74□□□□□ -1.33
TNFRSF1A-214ENST00000543048 C8orf49Q96NF6 230 aa6.74□□□□□ -1.33
TNFRSF1A-214ENST00000543048 DERL1Q9BUN8 251 aa6.74□□□□□ -1.33
TNFRSF1A-214ENST00000543048 KRTAP9-2Q9BYQ4 174 aa6.74□□□□□ -1.33
TNFRSF1A-214ENST00000543048 TRAV34A0A0B4J273 112 aa6.73□□□□□ -1.33
TNFRSF1A-214ENST00000543048 C9JCJ5 164 aa6.73□□□□□ -1.33
TNFRSF1A-214ENST00000543048 APOC3P02656 99 aa6.73□□□□□ -1.33
TNFRSF1A-214ENST00000543048 S100A9P06702 114 aaKnown RBP6.73□□□□□ -1.33
TNFRSF1A-214ENST00000543048 PFN1P07737 140 aaKnown RBP6.73□□□□□ -1.33
TNFRSF1A-214ENST00000543048 RPL35P42766 123 aaKnown RBP6.73□□□□□ -1.33
TNFRSF1A-214ENST00000543048 SVBPQ8N300 66 aa6.73□□□□□ -1.33
TNFRSF1A-214ENST00000543048 FMC1Q96HJ9 113 aa6.73□□□□□ -1.33
TNFRSF1A-214ENST00000543048 LINC00479Q96M42 142 aa6.73□□□□□ -1.33
TNFRSF1A-214ENST00000543048 ICOSQ9Y6W8 199 aa6.73□□□□□ -1.33
TNFRSF1A-214ENST00000543048 TRAV4A0A0B4J268 109 aa6.72□□□□□ -1.33
TNFRSF1A-214ENST00000543048 A0A1B0GVY2 172 aa6.72□□□□□ -1.33
TNFRSF1A-214ENST00000543048 FABP5P3A8MUU1 101 aa6.72□□□□□ -1.33
TNFRSF1A-214ENST00000543048 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.72□□□□□ -1.33
TNFRSF1A-214ENST00000543048 UBE2G1P62253 170 aa6.72□□□□□ -1.33
TNFRSF1A-214ENST00000543048 PNRC1Q12796 327 aaPredicted RBP6.72□□□□□ -1.33
TNFRSF1A-214ENST00000543048 MRPL23Q16540 153 aaKnown RBP6.72□□□□□ -1.33
TNFRSF1A-214ENST00000543048 CENPWQ5EE01 88 aa6.72□□□□□ -1.33
TNFRSF1A-214ENST00000543048 Q86TA4 180 aa6.72□□□□□ -1.33
TNFRSF1A-214ENST00000543048 OR4C5Q8NGB2 326 aa6.72□□□□□ -1.33
TNFRSF1A-214ENST00000543048 ZNF479Q96JC4 524 aa6.72□□□□□ -1.33
TNFRSF1A-214ENST00000543048 UPK3BQ9BT76 320 aa6.72□□□□□ -1.33
TNFRSF1A-214ENST00000543048 C11orf21Q9P2W6 132 aa6.72□□□□□ -1.33
TNFRSF1A-214ENST00000543048 NAT8Q9UHE5 227 aa6.72□□□□□ -1.33
TNFRSF1A-214ENST00000543048 MRPS16Q9Y3D3 137 aaKnown RBP6.72□□□□□ -1.33
TNFRSF1A-214ENST00000543048 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.72□□□□□ -1.33
TNFRSF1A-214ENST00000543048 TRBV20OR9-2A0A075B6H5 130 aa6.71□□□□□ -1.34
TNFRSF1A-214ENST00000543048 TRBV6-1A0A0K0K1D8 114 aa6.71□□□□□ -1.34
TNFRSF1A-214ENST00000543048 GNG4P50150 75 aa6.71□□□□□ -1.34
TNFRSF1A-214ENST00000543048 TMEM241Q24JQ0 296 aa6.71□□□□□ -1.34
TNFRSF1A-214ENST00000543048 LYPD5Q6UWN5 251 aa6.71□□□□□ -1.34
TNFRSF1A-214ENST00000543048 C6orf223Q8N319 242 aa6.71□□□□□ -1.34
TNFRSF1A-214ENST00000543048 ZFP30Q9Y2G7 519 aa6.71□□□□□ -1.34
TNFRSF1A-214ENST00000543048 LY96Q9Y6Y9 160 aa6.71□□□□□ -1.34
TNFRSF1A-214ENST00000543048 KRTAP9-6A0A140TA67 174 aa6.7□□□□□ -1.34
TNFRSF1A-214ENST00000543048 A0A1W2PPQ1 181 aa6.7□□□□□ -1.34
TNFRSF1A-214ENST00000543048 CIDEAO60543 219 aa6.7□□□□□ -1.34
TNFRSF1A-214ENST00000543048 SNAPINO95295 136 aa6.7□□□□□ -1.34
TNFRSF1A-214ENST00000543048 LTAP01374 205 aa6.7□□□□□ -1.34
TNFRSF1A-214ENST00000543048 ORM1P02763 201 aa6.7□□□□□ -1.34
TNFRSF1A-214ENST00000543048 ZNF876PQ49A33 203 aa6.7□□□□□ -1.34
TNFRSF1A-214ENST00000543048 NEGR1Q7Z3B1 354 aa6.7□□□□□ -1.34
TNFRSF1A-214ENST00000543048 CLRN3Q8NCR9 226 aa6.7□□□□□ -1.34
TNFRSF1A-214ENST00000543048 PTH2Q96A98 100 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms