RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 P01737 135 aa12.03□□□□□ -0.48
RABGGTA-203ENST00000543002 MED14OSP0DP75 135 aa12.03□□□□□ -0.48
RABGGTA-203ENST00000543002 HOXA5P20719 270 aa12.03□□□□□ -0.48
RABGGTA-203ENST00000543002 FAM74A3Q4VXF1 159 aa12.03□□□□□ -0.48
RABGGTA-203ENST00000543002 SCRT2Q9NQ03 307 aa12.03□□□□□ -0.48
RABGGTA-203ENST00000543002 MUC4Q99102 2169 aa12.03□□□□□ -0.48
RABGGTA-203ENST00000543002 TRAV4A0A0B4J268 109 aa12.02□□□□□ -0.49
RABGGTA-203ENST00000543002 IGHV3-53P01767 116 aa12.02□□□□□ -0.49
RABGGTA-203ENST00000543002 RPS20P60866 119 aaKnown RBP12.02□□□□□ -0.49
RABGGTA-203ENST00000543002 PIK3CD-AS1Q5SR53 167 aa12.02□□□□□ -0.49
RABGGTA-203ENST00000543002 TMEM88Q6PEY1 159 aa12.02□□□□□ -0.49
RABGGTA-203ENST00000543002 POM121L12Q8N7R1 296 aa12.02□□□□□ -0.49
RABGGTA-203ENST00000543002 NUDT10Q8NFP7 164 aa12.02□□□□□ -0.49
RABGGTA-203ENST00000543002 OR2D3Q8NGH3 330 aa12.02□□□□□ -0.49
RABGGTA-203ENST00000543002 NUDT11Q96G61 164 aa12.02□□□□□ -0.49
RABGGTA-203ENST00000543002 LINC01551Q86U37 167 aa12.01□□□□□ -0.49
RABGGTA-203ENST00000543002 OR4C5Q8NGB2 326 aa12.01□□□□□ -0.49
RABGGTA-203ENST00000543002 SFTA3P0C7M3 94 aa12□□□□□ -0.49
RABGGTA-203ENST00000543002 SYT8Q8NBV8 401 aa12□□□□□ -0.49
RABGGTA-203ENST00000543002 ZNF479Q96JC4 524 aa12□□□□□ -0.49
RABGGTA-203ENST00000543002 SSBP4Q9BWG4 385 aaPredicted RBP12□□□□□ -0.49
RABGGTA-203ENST00000543002 RNASE7Q9H1E1 156 aaKnown RBP12□□□□□ -0.49
RABGGTA-203ENST00000543002 PHLDA3Q9Y5J5 127 aa12□□□□□ -0.49
RABGGTA-203ENST00000543002 XKRY2A2RUG3 117 aa11.99□□□□□ -0.49
RABGGTA-203ENST00000543002 RS1O15537 224 aa11.99□□□□□ -0.49
RABGGTA-203ENST00000543002 SNAI2O43623 268 aa11.99□□□□□ -0.49
RABGGTA-203ENST00000543002 OR5AL1P0C617 328 aa11.99□□□□□ -0.49
RABGGTA-203ENST00000543002 FHL2Q14192 279 aa11.99□□□□□ -0.49
RABGGTA-203ENST00000543002 TMEM241Q24JQ0 296 aa11.99□□□□□ -0.49
RABGGTA-203ENST00000543002 SOHLH1Q5JUK2 328 aa11.99□□□□□ -0.49
RABGGTA-203ENST00000543002 DMRTA1Q5VZB9 504 aa11.99□□□□□ -0.49
RABGGTA-203ENST00000543002 FAM231DQ6ZW35 169 aa11.99□□□□□ -0.49
RABGGTA-203ENST00000543002 C15orf53Q8NAA6 179 aa11.99□□□□□ -0.49
RABGGTA-203ENST00000543002 DYNC2H1Q8NCM8 4307 aaKnown RBP11.99□□□□□ -0.49
RABGGTA-203ENST00000543002 TRAV26-1A0A087WT03 109 aa11.98□□□□□ -0.49
RABGGTA-203ENST00000543002 GZMBP10144 247 aa11.98□□□□□ -0.49
RABGGTA-203ENST00000543002 SLAQ13239 276 aa11.98□□□□□ -0.49
RABGGTA-203ENST00000543002 CFAP126Q5VTH2 177 aa11.98□□□□□ -0.49
RABGGTA-203ENST00000543002 ZFP82Q8N141 532 aa11.98□□□□□ -0.49
RABGGTA-203ENST00000543002 RPP21Q9H633 154 aaKnown RBP11.98□□□□□ -0.49
RABGGTA-203ENST00000543002 NAT8Q9UHE5 227 aa11.98□□□□□ -0.49
RABGGTA-203ENST00000543002 TRGV4A0A0C4DH28 118 aa11.97□□□□□ -0.49
RABGGTA-203ENST00000543002 A8MWV9 139 aa11.97□□□□□ -0.49
RABGGTA-203ENST00000543002 H3BNG1 76 aa11.97□□□□□ -0.49
RABGGTA-203ENST00000543002 CIDEAO60543 219 aa11.97□□□□□ -0.49
RABGGTA-203ENST00000543002 IGLC6P0CF74 106 aa11.97□□□□□ -0.49
RABGGTA-203ENST00000543002 ERVFC1-1P60608 527 aa11.97□□□□□ -0.49
RABGGTA-203ENST00000543002 PRO0255Q9UI72 69 aa11.97□□□□□ -0.49
RABGGTA-203ENST00000543002 HHLA3Q9XRX5 114 aa11.97□□□□□ -0.49
RABGGTA-203ENST00000543002 A0A0J9YY99 117 aa11.96□□□□□ -0.49
RABGGTA-203ENST00000543002 LCE6AA0A183 80 aa11.96□□□□□ -0.49
RABGGTA-203ENST00000543002 M0R381 172 aa11.96□□□□□ -0.49
RABGGTA-203ENST00000543002 GATCO43716 136 aaKnown RBP11.96□□□□□ -0.49
RABGGTA-203ENST00000543002 NXPH4O95158 308 aa11.96□□□□□ -0.49
RABGGTA-203ENST00000543002 CRYBA4P53673 196 aa11.96□□□□□ -0.49
RABGGTA-203ENST00000543002 RPL23P62829 140 aaKnown RBP11.96□□□□□ -0.49
RABGGTA-203ENST00000543002 FER1L6-AS1Q8NA97 138 aa11.96□□□□□ -0.49
RABGGTA-203ENST00000543002 OR10AG1Q8NH19 301 aa11.96□□□□□ -0.49
RABGGTA-203ENST00000543002 VSIG2Q96IQ7 327 aa11.96□□□□□ -0.49
RABGGTA-203ENST00000543002 LINC00476Q8WZB0 136 aa11.95□□□□□ -0.5
RABGGTA-203ENST00000543002 JPT2Q9H910 190 aa11.95□□□□□ -0.5
RABGGTA-203ENST00000543002 OSTCQ9NRP0 149 aa11.95□□□□□ -0.5
RABGGTA-203ENST00000543002 NACAE9PAV3 2078 aa11.94□□□□□ -0.5
RABGGTA-203ENST00000543002 A0A1W2PPQ1 181 aa11.94□□□□□ -0.5
RABGGTA-203ENST00000543002 PAX4O43316 350 aa11.94□□□□□ -0.5
RABGGTA-203ENST00000543002 NUDT3O95989 172 aa11.94□□□□□ -0.5
RABGGTA-203ENST00000543002 SPANXN1Q5VSR9 72 aa11.94□□□□□ -0.5
RABGGTA-203ENST00000543002 LGALS9CQ6DKI2 356 aa11.94□□□□□ -0.5
RABGGTA-203ENST00000543002 UQCC3Q6UW78 93 aa11.94□□□□□ -0.5
RABGGTA-203ENST00000543002 ISOC2Q96AB3 205 aa11.94□□□□□ -0.5
RABGGTA-203ENST00000543002 SFRP2Q96HF1 295 aa11.94□□□□□ -0.5
RABGGTA-203ENST00000543002 F2Z2F3 143 aa11.93□□□□□ -0.5
RABGGTA-203ENST00000543002 GATA1P15976 413 aaPredicted RBP11.93□□□□□ -0.5
RABGGTA-203ENST00000543002 ADIRFQ15847 76 aa11.93□□□□□ -0.5
RABGGTA-203ENST00000543002 CT83Q5H943 113 aa11.93□□□□□ -0.5
RABGGTA-203ENST00000543002 ZFP2Q6ZN57 461 aa11.93□□□□□ -0.5
RABGGTA-203ENST00000543002 TPPP3Q9BW30 176 aa11.93□□□□□ -0.5
RABGGTA-203ENST00000543002 PLECQ15149 4684 aaKnown RBP11.93□□□□□ -0.5
RABGGTA-203ENST00000543002 IGHV3-73A0A0B4J1V6 119 aa11.92□□□□□ -0.5
RABGGTA-203ENST00000543002 MUC21A0A0G2JKD1 596 aa11.92□□□□□ -0.5
RABGGTA-203ENST00000543002 MUC21A0A140T8X8 626 aa11.92□□□□□ -0.5
RABGGTA-203ENST00000543002 A8MWL6 223 aa11.92□□□□□ -0.5
RABGGTA-203ENST00000543002 UFSP1Q6NVU6 142 aa11.92□□□□□ -0.5
RABGGTA-203ENST00000543002 C15orf54Q8N8G6 183 aa11.92□□□□□ -0.5
RABGGTA-203ENST00000543002 SAMD10Q9BYL1 202 aa11.92□□□□□ -0.5
RABGGTA-203ENST00000543002 LINC00862A6NCI5 91 aa11.91□□□□□ -0.5
RABGGTA-203ENST00000543002 RHODO00212 210 aa11.91□□□□□ -0.5
RABGGTA-203ENST00000543002 LY6G6CO95867 125 aa11.91□□□□□ -0.5
RABGGTA-203ENST00000543002 CRYGDP07320 174 aa11.91□□□□□ -0.5
RABGGTA-203ENST00000543002 P0DMU3 169 aa11.91□□□□□ -0.5
RABGGTA-203ENST00000543002 FAM231AP0DMU4 169 aa11.91□□□□□ -0.5
RABGGTA-203ENST00000543002 FAM231CP0DMU5 169 aa11.91□□□□□ -0.5
RABGGTA-203ENST00000543002 CTRLP40313 264 aa11.91□□□□□ -0.5
RABGGTA-203ENST00000543002 CACNG7P62955 275 aa11.91□□□□□ -0.5
RABGGTA-203ENST00000543002 LYZL1Q6UWQ5 148 aa11.91□□□□□ -0.5
RABGGTA-203ENST00000543002 TRBV6-4A0A1B0GX49 114 aa11.9□□□□□ -0.5
RABGGTA-203ENST00000543002 SSTP61278 116 aa11.9□□□□□ -0.5
RABGGTA-203ENST00000543002 WDR73Q6P4I2 378 aa11.9□□□□□ -0.5
RABGGTA-203ENST00000543002 COMMD7Q86VX2 200 aa11.9□□□□□ -0.5
RABGGTA-203ENST00000543002 GTSF1Q8WW33 167 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms