RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 INSP01308 110 aa7.7□□□□□ -1.18
NPIPB3-210ENST00000542817 TSPOP30536 169 aa7.7□□□□□ -1.18
NPIPB3-210ENST00000542817 CENPWQ5EE01 88 aa7.7□□□□□ -1.18
NPIPB3-210ENST00000542817 NHLRC2Q8NBF2 726 aa7.7□□□□□ -1.18
NPIPB3-210ENST00000542817 SVIPQ8NHG7 77 aa7.7□□□□□ -1.18
NPIPB3-210ENST00000542817 RCHY1Q96PM5 261 aa7.7□□□□□ -1.18
NPIPB3-210ENST00000542817 C1QTNF4Q9BXJ3 329 aa7.7□□□□□ -1.18
NPIPB3-210ENST00000542817 PARLQ9H300 379 aa7.7□□□□□ -1.18
NPIPB3-210ENST00000542817 ZFP30Q9Y2G7 519 aa7.7□□□□□ -1.18
NPIPB3-210ENST00000542817 PLAC8L1A1L4L8 177 aa7.69□□□□□ -1.18
NPIPB3-210ENST00000542817 GPX1P07203 203 aa7.69□□□□□ -1.18
NPIPB3-210ENST00000542817 AZU1P20160 251 aa7.69□□□□□ -1.18
NPIPB3-210ENST00000542817 SAPCD1Q5SSQ6 148 aa7.69□□□□□ -1.18
NPIPB3-210ENST00000542817 BAGE2Q86Y30 109 aa7.69□□□□□ -1.18
NPIPB3-210ENST00000542817 Q8NAQ8 132 aa7.69□□□□□ -1.18
NPIPB3-210ENST00000542817 OR11H2Q8NH07 326 aa7.69□□□□□ -1.18
NPIPB3-210ENST00000542817 SPATA25Q9BR10 227 aa7.69□□□□□ -1.18
NPIPB3-210ENST00000542817 C9JCJ5 164 aa7.68□□□□□ -1.18
NPIPB3-210ENST00000542817 K7EN84 100 aa7.68□□□□□ -1.18
NPIPB3-210ENST00000542817 NHLRC4P0CG21 123 aaPredicted RBP7.68□□□□□ -1.18
NPIPB3-210ENST00000542817 UBE2G1P62253 170 aa7.68□□□□□ -1.18
NPIPB3-210ENST00000542817 ADIRFQ15847 76 aa7.68□□□□□ -1.18
NPIPB3-210ENST00000542817 COX19Q49B96 90 aa7.68□□□□□ -1.18
NPIPB3-210ENST00000542817 LINC00467Q9BRT7 94 aa7.68□□□□□ -1.18
NPIPB3-210ENST00000542817 TP53TG3Q9ULZ0 132 aa7.68□□□□□ -1.18
NPIPB3-210ENST00000542817 Q0VG73 95 aa7.67□□□□□ -1.18
NPIPB3-210ENST00000542817 TDRG1Q3Y452 100 aa7.67□□□□□ -1.18
NPIPB3-210ENST00000542817 OCC1Q8TAD7 63 aa7.67□□□□□ -1.18
NPIPB3-210ENST00000542817 LY96Q9Y6Y9 160 aa7.67□□□□□ -1.18
NPIPB3-210ENST00000542817 IGHV3OR16-12A0A075B7B8 117 aa7.66□□□□□ -1.18
NPIPB3-210ENST00000542817 IGKV3D-20A0A0C4DH25 116 aa7.66□□□□□ -1.18
NPIPB3-210ENST00000542817 IGHV4-28A0A0C4DH34 117 aa7.66□□□□□ -1.18
NPIPB3-210ENST00000542817 C19orf71A6NCJ1 209 aa7.66□□□□□ -1.18
NPIPB3-210ENST00000542817 SCGB1D1O95968 90 aa7.66□□□□□ -1.18
NPIPB3-210ENST00000542817 OR5I1Q13606 314 aa7.66□□□□□ -1.18
NPIPB3-210ENST00000542817 COL5A1-AS1Q5SY13 56 aa7.66□□□□□ -1.18
NPIPB3-210ENST00000542817 TMEM256Q8N2U0 113 aa7.66□□□□□ -1.18
NPIPB3-210ENST00000542817 C11orf72Q8NBR9 251 aa7.66□□□□□ -1.18
NPIPB3-210ENST00000542817 RNASE8Q8TDE3 154 aaKnown RBP7.66□□□□□ -1.18
NPIPB3-210ENST00000542817 LINC01587Q99440 93 aa7.66□□□□□ -1.18
NPIPB3-210ENST00000542817 LYSTQ99698 3801 aa7.66□□□□□ -1.18
NPIPB3-210ENST00000542817 EDA2RQ9HAV5 297 aa7.66□□□□□ -1.18
NPIPB3-210ENST00000542817 TRAPPC1Q9Y5R8 145 aa7.66□□□□□ -1.18
NPIPB3-210ENST00000542817 TENM2Q9NT68 2774 aa7.66□□□□□ -1.18
NPIPB3-210ENST00000542817 IGHV1OR15-1A0A075B7D0 117 aa7.65□□□□□ -1.18
NPIPB3-210ENST00000542817 TRAV21A0A0B4J279 112 aa7.65□□□□□ -1.18
NPIPB3-210ENST00000542817 DEFB4AO15263 64 aa7.65□□□□□ -1.18
NPIPB3-210ENST00000542817 SH2D1AO60880 128 aa7.65□□□□□ -1.18
NPIPB3-210ENST00000542817 GNG4P50150 75 aa7.65□□□□□ -1.18
NPIPB3-210ENST00000542817 RPL19P84098 196 aaKnown RBP7.65□□□□□ -1.18
NPIPB3-210ENST00000542817 ANXA2RQ3ZCQ2 193 aa7.65□□□□□ -1.18
NPIPB3-210ENST00000542817 MUC21Q5SSG8 566 aa7.65□□□□□ -1.18
NPIPB3-210ENST00000542817 OR2D3Q8NGH3 330 aa7.65□□□□□ -1.18
NPIPB3-210ENST00000542817 IL17DQ8TAD2 202 aa7.65□□□□□ -1.18
NPIPB3-210ENST00000542817 ORAOV1Q8WV07 137 aa7.65□□□□□ -1.18
NPIPB3-210ENST00000542817 SMIM12Q96EX1 92 aa7.65□□□□□ -1.18
NPIPB3-210ENST00000542817 NDFIP1Q9BT67 221 aa7.65□□□□□ -1.18
NPIPB3-210ENST00000542817 A0A1W2PPQ1 181 aa7.64□□□□□ -1.19
NPIPB3-210ENST00000542817 SMIM9A6NGZ8 99 aa7.64□□□□□ -1.19
NPIPB3-210ENST00000542817 FABP5P3A8MUU1 101 aa7.64□□□□□ -1.19
NPIPB3-210ENST00000542817 GNRH2O43555 120 aa7.64□□□□□ -1.19
NPIPB3-210ENST00000542817 MIFP14174 115 aa7.64□□□□□ -1.19
NPIPB3-210ENST00000542817 G0S2P27469 103 aa7.64□□□□□ -1.19
NPIPB3-210ENST00000542817 RPS20P60866 119 aaKnown RBP7.64□□□□□ -1.19
NPIPB3-210ENST00000542817 LINC01551Q86U37 167 aa7.64□□□□□ -1.19
NPIPB3-210ENST00000542817 ZMAT4Q9H898 229 aa7.64□□□□□ -1.19
NPIPB3-210ENST00000542817 K7EP13 123 aa7.63□□□□□ -1.19
NPIPB3-210ENST00000542817 PCP4P48539 62 aa7.63□□□□□ -1.19
NPIPB3-210ENST00000542817 LINC01559Q495D7 138 aa7.63□□□□□ -1.19
NPIPB3-210ENST00000542817 FAM162BQ5T6X4 162 aa7.63□□□□□ -1.19
NPIPB3-210ENST00000542817 C11orf68Q9H3H3 251 aaKnown RBP7.63□□□□□ -1.19
NPIPB3-210ENST00000542817 MDFICQ9P1T7 246 aa7.63□□□□□ -1.19
NPIPB3-210ENST00000542817 CELA1Q9UNI1 258 aa7.63□□□□□ -1.19
NPIPB3-210ENST00000542817 U3KQK5 164 aa7.63□□□□□ -1.19
NPIPB3-210ENST00000542817 DNAH1Q9P2D7 4330 aa7.63□□□□□ -1.19
NPIPB3-210ENST00000542817 VPS13DQ5THJ4 4388 aa7.62□□□□□ -1.19
NPIPB3-210ENST00000542817 IGHV3-16A0A0C4DH30 117 aa7.62□□□□□ -1.19
NPIPB3-210ENST00000542817 A0A0J9YWU9 116 aa7.62□□□□□ -1.19
NPIPB3-210ENST00000542817 C20orf202A1L168 122 aa7.62□□□□□ -1.19
NPIPB3-210ENST00000542817 HTN1P15515 57 aa7.62□□□□□ -1.19
NPIPB3-210ENST00000542817 RRN3P1Q2M238 152 aa7.62□□□□□ -1.19
NPIPB3-210ENST00000542817 TMEM263Q8WUH6 116 aaKnown RBP7.62□□□□□ -1.19
NPIPB3-210ENST00000542817 SACSQ9NZJ4 4579 aa7.62□□□□□ -1.19
NPIPB3-210ENST00000542817 MUC4Q99102 2169 aa7.62□□□□□ -1.19
NPIPB3-210ENST00000542817 MT-ND6P03923 174 aa7.61□□□□□ -1.19
NPIPB3-210ENST00000542817 NPSP0C0P6 89 aa7.61□□□□□ -1.19
NPIPB3-210ENST00000542817 MGST1P10620 155 aaKnown RBP7.61□□□□□ -1.19
NPIPB3-210ENST00000542817 RNASE3P12724 160 aaKnown RBP7.61□□□□□ -1.19
NPIPB3-210ENST00000542817 CTRLP40313 264 aa7.61□□□□□ -1.19
NPIPB3-210ENST00000542817 OR10J3Q5JRS4 329 aa7.61□□□□□ -1.19
NPIPB3-210ENST00000542817 PRR27Q6MZM9 219 aa7.61□□□□□ -1.19
NPIPB3-210ENST00000542817 LINC00612Q8N6U2 182 aa7.61□□□□□ -1.19
NPIPB3-210ENST00000542817 NUDT10Q8NFP7 164 aa7.61□□□□□ -1.19
NPIPB3-210ENST00000542817 NUDT11Q96G61 164 aa7.61□□□□□ -1.19
NPIPB3-210ENST00000542817 VAMP8Q9BV40 100 aa7.61□□□□□ -1.19
NPIPB3-210ENST00000542817 RNASE7Q9H1E1 156 aaKnown RBP7.61□□□□□ -1.19
NPIPB3-210ENST00000542817 KMT2CQ8NEZ4 4911 aaKnown RBP7.61□□□□□ -1.19
NPIPB3-210ENST00000542817 CBY3A6NI87 242 aa7.6□□□□□ -1.19
NPIPB3-210ENST00000542817 TCL1AP56279 114 aa7.6□□□□□ -1.19
NPIPB3-210ENST00000542817 IBA57Q5T440 356 aaKnown RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms