RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 KTN1-AS1Q86SY8 53 aa3.27□□□□□ -1.89
SNHG1-219ENST00000542112 FAM216BQ8N7L0 139 aa3.27□□□□□ -1.89
SNHG1-219ENST00000542112 DYNLRB2Q8TF09 96 aa3.27□□□□□ -1.89
SNHG1-219ENST00000542112 SRSF12Q8WXF0 261 aaKnown RBP3.27□□□□□ -1.89
SNHG1-219ENST00000542112 FXYD5Q96DB9 178 aa3.27□□□□□ -1.89
SNHG1-219ENST00000542112 SCGB3A1Q96QR1 104 aa3.27□□□□□ -1.89
SNHG1-219ENST00000542112 TM2D3Q9BRN9 247 aa3.27□□□□□ -1.89
SNHG1-219ENST00000542112 TTTY13Q9BZ97 58 aa3.27□□□□□ -1.89
SNHG1-219ENST00000542112 ZNF71Q9NQZ8 489 aaPredicted RBP3.27□□□□□ -1.89
SNHG1-219ENST00000542112 XCL2Q9UBD3 114 aa3.27□□□□□ -1.89
SNHG1-219ENST00000542112 CACNA1EQ15878 2313 aa3.27□□□□□ -1.89
SNHG1-219ENST00000542112 SHANK1Q9Y566 2161 aa3.27□□□□□ -1.89
SNHG1-219ENST00000542112 ASXL3Q9C0F0 2248 aa3.26□□□□□ -1.89
SNHG1-219ENST00000542112 A0A0J9YXY3 114 aa3.26□□□□□ -1.89
SNHG1-219ENST00000542112 LOC389332A0A1B0GUA5 103 aa3.26□□□□□ -1.89
SNHG1-219ENST00000542112 IQCF6A8MYZ5 107 aa3.26□□□□□ -1.89
SNHG1-219ENST00000542112 H7BZZ5 65 aa3.26□□□□□ -1.89
SNHG1-219ENST00000542112 UBE2L6O14933 153 aa3.26□□□□□ -1.89
SNHG1-219ENST00000542112 TIMM17BO60830 172 aa3.26□□□□□ -1.89
SNHG1-219ENST00000542112 ERC2-IT1O76042 136 aa3.26□□□□□ -1.89
SNHG1-219ENST00000542112 RNASE2P10153 161 aaKnown RBP3.26□□□□□ -1.89
SNHG1-219ENST00000542112 DAD1P61803 113 aa3.26□□□□□ -1.89
SNHG1-219ENST00000542112 FHL2Q14192 279 aa3.26□□□□□ -1.89
SNHG1-219ENST00000542112 RHOHQ15669 191 aa3.26□□□□□ -1.89
SNHG1-219ENST00000542112 DEFB134Q4QY38 66 aa3.26□□□□□ -1.89
SNHG1-219ENST00000542112 FAM27BQ5VT28 67 aa3.26□□□□□ -1.89
SNHG1-219ENST00000542112 TOMM6Q96B49 74 aa3.26□□□□□ -1.89
SNHG1-219ENST00000542112 MRPL53Q96EL3 112 aaKnown RBP3.26□□□□□ -1.89
SNHG1-219ENST00000542112 UBE2D4Q9Y2X8 147 aa3.26□□□□□ -1.89
SNHG1-219ENST00000542112 ICOSQ9Y6W8 199 aa3.26□□□□□ -1.89
SNHG1-219ENST00000542112 RP1P56715 2156 aa3.26□□□□□ -1.89
SNHG1-219ENST00000542112 SDK1Q7Z5N4 2213 aa3.25□□□□□ -1.89
SNHG1-219ENST00000542112 RANBP2P49792 3224 aaKnown RBP3.25□□□□□ -1.89
SNHG1-219ENST00000542112 C5orf42Q9H799 3197 aa3.25□□□□□ -1.89
SNHG1-219ENST00000542112 FER1L5A0AVI2 2057 aa3.25□□□□□ -1.89
SNHG1-219ENST00000542112 IGLV2-18A0A075B6J9 118 aa3.25□□□□□ -1.89
SNHG1-219ENST00000542112 IGLV3-32A0A0A0MS00 114 aa3.25□□□□□ -1.89
SNHG1-219ENST00000542112 IGKV1D-43A0A0B4J1Z2 117 aa3.25□□□□□ -1.89
SNHG1-219ENST00000542112 KRTAP9-6A0A140TA67 174 aa3.25□□□□□ -1.89
SNHG1-219ENST00000542112 C17orf98A8MV24 154 aa3.25□□□□□ -1.89
SNHG1-219ENST00000542112 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.25□□□□□ -1.89
SNHG1-219ENST00000542112 LINC01565O15544 149 aa3.25□□□□□ -1.89
SNHG1-219ENST00000542112 NDUFA3O95167 84 aa3.25□□□□□ -1.89
SNHG1-219ENST00000542112 SNRPD3P62318 126 aaKnown RBP3.25□□□□□ -1.89
SNHG1-219ENST00000542112 PDE6HQ13956 83 aa3.25□□□□□ -1.89
SNHG1-219ENST00000542112 DAZAP2Q15038 168 aaPredicted RBP3.25□□□□□ -1.89
SNHG1-219ENST00000542112 SERTAD4-AS1Q5TG53 156 aa3.25□□□□□ -1.89
SNHG1-219ENST00000542112 DYNAPQ8N1N2 210 aa3.25□□□□□ -1.89
SNHG1-219ENST00000542112 CD177Q8N6Q3 437 aa3.25□□□□□ -1.89
SNHG1-219ENST00000542112 THAP8Q8NA92 274 aa3.25□□□□□ -1.89
SNHG1-219ENST00000542112 LY6G5BQ8NDX9 201 aa3.25□□□□□ -1.89
SNHG1-219ENST00000542112 SMCR5Q8TEV8 140 aa3.25□□□□□ -1.89
SNHG1-219ENST00000542112 TMEM141Q96I45 108 aa3.25□□□□□ -1.89
SNHG1-219ENST00000542112 TMEM14BQ9NUH8 114 aa3.25□□□□□ -1.89
SNHG1-219ENST00000542112 MOB4Q9Y3A3 225 aa3.25□□□□□ -1.89
SNHG1-219ENST00000542112 UNC13CQ8NB66 2214 aa3.25□□□□□ -1.89
SNHG1-219ENST00000542112 FREM3P0C091 2139 aa3.25□□□□□ -1.89
SNHG1-219ENST00000542112 ADAMTS9Q9P2N4 1935 aa3.25□□□□□ -1.89
SNHG1-219ENST00000542112 TMEM30CPA0ZSE6 113 aa3.24□□□□□ -1.89
SNHG1-219ENST00000542112 KRTAP9-7A8MTY7 169 aa3.24□□□□□ -1.89
SNHG1-219ENST00000542112 C10orf142B7Z368 130 aa3.24□□□□□ -1.89
SNHG1-219ENST00000542112 DNAL4O96015 105 aa3.24□□□□□ -1.89
SNHG1-219ENST00000542112 IGHV3-13P01766 116 aa3.24□□□□□ -1.89
SNHG1-219ENST00000542112 IGHV4-39P01824 125 aa3.24□□□□□ -1.89
SNHG1-219ENST00000542112 CD24P25063 80 aa3.24□□□□□ -1.89
SNHG1-219ENST00000542112 ZNF80P51504 273 aaPredicted RBP3.24□□□□□ -1.89
SNHG1-219ENST00000542112 UBE2E1P51965 193 aa3.24□□□□□ -1.89
SNHG1-219ENST00000542112 UBE2BP63146 152 aa3.24□□□□□ -1.89
SNHG1-219ENST00000542112 RBM3P98179 157 aaKnown RBP3.24□□□□□ -1.89
SNHG1-219ENST00000542112 PRCDQ00LT1 54 aa3.24□□□□□ -1.89
SNHG1-219ENST00000542112 TFF2Q03403 129 aa3.24□□□□□ -1.89
SNHG1-219ENST00000542112 FOXF2Q12947 444 aa3.24□□□□□ -1.89
SNHG1-219ENST00000542112 Q1T7F1 81 aa3.24□□□□□ -1.89
SNHG1-219ENST00000542112 TMEM30BQ3MIR4 351 aa3.24□□□□□ -1.89
SNHG1-219ENST00000542112 PVRIGQ6DKI7 326 aa3.24□□□□□ -1.89
SNHG1-219ENST00000542112 LINC00322Q6ZN03 302 aaPredicted RBP3.24□□□□□ -1.89
SNHG1-219ENST00000542112 PHF5AQ7RTV0 110 aaKnown RBP3.24□□□□□ -1.89
SNHG1-219ENST00000542112 ZCCHC24Q8N2G6 241 aaKnown RBP3.24□□□□□ -1.89
SNHG1-219ENST00000542112 UBE2E2Q96LR5 201 aa3.24□□□□□ -1.89
SNHG1-219ENST00000542112 CYSTM1Q9H1C7 97 aa3.24□□□□□ -1.89
SNHG1-219ENST00000542112 ASCC3Q8N3C0 2202 aaKnown RBP3.23□□□□□ -1.89
SNHG1-219ENST00000542112 IGHV1OR21-1A0A087WYE8 117 aa3.23□□□□□ -1.89
SNHG1-219ENST00000542112 IGHV1-45A0A0A0MS14 117 aa3.23□□□□□ -1.89
SNHG1-219ENST00000542112 M0R381 172 aa3.23□□□□□ -1.89
SNHG1-219ENST00000542112 COX7A2LO14548 114 aa3.23□□□□□ -1.89
SNHG1-219ENST00000542112 LEPROTO15243 131 aa3.23□□□□□ -1.89
SNHG1-219ENST00000542112 SH2D1AO60880 128 aa3.23□□□□□ -1.89
SNHG1-219ENST00000542112 TECTAO75443 2155 aa3.23□□□□□ -1.89
SNHG1-219ENST00000542112 FSTL3O95633 263 aa3.23□□□□□ -1.89
SNHG1-219ENST00000542112 APOC4P55056 127 aa3.23□□□□□ -1.89
SNHG1-219ENST00000542112 BLCAPP62952 87 aa3.23□□□□□ -1.89
SNHG1-219ENST00000542112 ESRGQ1W209 222 aa3.23□□□□□ -1.89
SNHG1-219ENST00000542112 LCE3BQ5TA77 95 aa3.23□□□□□ -1.89
SNHG1-219ENST00000542112 LCE4AQ5TA78 99 aa3.23□□□□□ -1.89
SNHG1-219ENST00000542112 LYPD5Q6UWN5 251 aa3.23□□□□□ -1.89
SNHG1-219ENST00000542112 LYZL1Q6UWQ5 148 aa3.23□□□□□ -1.89
SNHG1-219ENST00000542112 GFRALQ6UXV0 394 aa3.23□□□□□ -1.89
SNHG1-219ENST00000542112 VMO1Q7Z5L0 202 aa3.23□□□□□ -1.89
SNHG1-219ENST00000542112 WDR86Q86TI4 376 aa3.23□□□□□ -1.89
SNHG1-219ENST00000542112 Q8N2B8 174 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms