RNA–Protein interactions for RNA: ENST00000541640.5

PRKAB1-206, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,303 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-206ENST00000541640 SRD5A1P18405 259 aa9.96□□□□□ -0.82
PRKAB1-206ENST00000541640 ORMDL2Q53FV1 153 aa9.96□□□□□ -0.82
PRKAB1-206ENST00000541640 POM121L12Q8N7R1 296 aa9.96□□□□□ -0.82
PRKAB1-206ENST00000541640 VPS13CQ709C8 3753 aa9.96□□□□□ -0.82
PRKAB1-206ENST00000541640 IGKV2D-26A0A0A0MRZ7 120 aa9.95□□□□□ -0.82
PRKAB1-206ENST00000541640 C7orf71A4D174 169 aa9.95□□□□□ -0.82
PRKAB1-206ENST00000541640 A6NDN8 102 aa9.95□□□□□ -0.82
PRKAB1-206ENST00000541640 HLA-DRB4P13762 266 aa9.95□□□□□ -0.82
PRKAB1-206ENST00000541640 AP1S3Q96PC3 154 aa9.95□□□□□ -0.82
PRKAB1-206ENST00000541640 HLA-DRB4X5D2U9 266 aa9.95□□□□□ -0.82
PRKAB1-206ENST00000541640 TENM4Q6N022 2769 aa9.95□□□□□ -0.82
PRKAB1-206ENST00000541640 A0A087WX48 190 aa9.95□□□□□ -0.82
PRKAB1-206ENST00000541640 HIGD1BQ9P298 99 aa9.95□□□□□ -0.82
PRKAB1-206ENST00000541640 SELENOKQ9Y6D0 94 aa9.95□□□□□ -0.82
PRKAB1-206ENST00000541640 RNF223E7ERA6 249 aa9.94□□□□□ -0.82
PRKAB1-206ENST00000541640 MRPL35Q9NZE8 188 aaKnown RBP9.94□□□□□ -0.82
PRKAB1-206ENST00000541640 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.94□□□□□ -0.828e-8■■■■■ 43.5
PRKAB1-206ENST00000541640 CELSR1Q9NYQ6 3014 aa9.94□□□□□ -0.82
PRKAB1-206ENST00000541640 TRAV12-1A0A0B4J245 112 aa9.94□□□□□ -0.82
PRKAB1-206ENST00000541640 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.94□□□□□ -0.82
PRKAB1-206ENST00000541640 H3BRM9 83 aa9.94□□□□□ -0.82
PRKAB1-206ENST00000541640 PPP1R17O96001 155 aa9.94□□□□□ -0.82
PRKAB1-206ENST00000541640 ZC2HC1BQ5TFG8 222 aa9.94□□□□□ -0.82
PRKAB1-206ENST00000541640 AMMECR1LQ6DCA0 310 aa9.94□□□□□ -0.82
PRKAB1-206ENST00000541640 C10orf99Q6UWK7 81 aa9.94□□□□□ -0.82
PRKAB1-206ENST00000541640 TOMM6Q96B49 74 aa9.94□□□□□ -0.82
PRKAB1-206ENST00000541640 RPL39LQ96EH5 51 aaKnown RBP9.94□□□□□ -0.82
PRKAB1-206ENST00000541640 USP9YO00507 2555 aaPredicted RBP9.93□□□□□ -0.82
PRKAB1-206ENST00000541640 TRAV8-6A0A0B4J262 113 aa9.93□□□□□ -0.82
PRKAB1-206ENST00000541640 MGPP08493 103 aa9.93□□□□□ -0.82
PRKAB1-206ENST00000541640 COTL1Q14019 142 aa9.93□□□□□ -0.82
PRKAB1-206ENST00000541640 ODF3Q96PU9 254 aa9.93□□□□□ -0.82
PRKAB1-206ENST00000541640 TMEM160Q9NX00 188 aa9.93□□□□□ -0.82
PRKAB1-206ENST00000541640 TGFAP01135 160 aa9.93□□□□□ -0.82
PRKAB1-206ENST00000541640 PLNP26678 52 aa9.93□□□□□ -0.82
PRKAB1-206ENST00000541640 FAM159AQ6UWV7 190 aa9.93□□□□□ -0.82
PRKAB1-206ENST00000541640 GTSCR1Q86UQ5 136 aa9.93□□□□□ -0.82
PRKAB1-206ENST00000541640 KIF25-AS1Q9Y6Z4 181 aa9.93□□□□□ -0.82
PRKAB1-206ENST00000541640 FSHBP01225 129 aa9.91□□□□□ -0.82
PRKAB1-206ENST00000541640 LINC00315P59091 139 aa9.91□□□□□ -0.82
PRKAB1-206ENST00000541640 VPREB3Q9UKI3 123 aa9.91□□□□□ -0.82
PRKAB1-206ENST00000541640 C9orf118A6NHY6 69 aa9.91□□□□□ -0.82
PRKAB1-206ENST00000541640 H7C1H1 209 aa9.91□□□□□ -0.82
PRKAB1-206ENST00000541640 RPL32P62910 135 aaKnown RBP9.91□□□□□ -0.82
PRKAB1-206ENST00000541640 SCGB3A1Q96QR1 104 aa9.91□□□□□ -0.82
PRKAB1-206ENST00000541640 CRYBG3Q68DQ2 2970 aa9.91□□□□□ -0.82
PRKAB1-206ENST00000541640 MUC4Q99102 2169 aa9.9□□□□□ -0.82
PRKAB1-206ENST00000541640 IGHV4OR15-8A0A075B7B6 117 aa9.9□□□□□ -0.82
PRKAB1-206ENST00000541640 A0A087WW49 117 aa9.9□□□□□ -0.82
PRKAB1-206ENST00000541640 F8VRH5 84 aa9.9□□□□□ -0.82
PRKAB1-206ENST00000541640 K7EQG2 157 aa9.9□□□□□ -0.82
PRKAB1-206ENST00000541640 LGALS9O00182 355 aa9.9□□□□□ -0.82
PRKAB1-206ENST00000541640 TTTY13Q9BZ97 58 aa9.9□□□□□ -0.82
PRKAB1-206ENST00000541640 CST9LQ9H4G1 147 aa9.9□□□□□ -0.82
PRKAB1-206ENST00000541640 HELZ2Q9BYK8 2649 aaKnown RBP9.9□□□□□ -0.82
PRKAB1-206ENST00000541640 A0A0J9YX75 114 aa9.9□□□□□ -0.82
PRKAB1-206ENST00000541640 ELANEP08246 267 aa9.9□□□□□ -0.82
PRKAB1-206ENST00000541640 LGALS1P09382 135 aaKnown RBP9.9□□□□□ -0.82
PRKAB1-206ENST00000541640 SNRPD3P62318 126 aaKnown RBP9.9□□□□□ -0.82
PRKAB1-206ENST00000541640 Q6YL49 198 aa9.9□□□□□ -0.82
PRKAB1-206ENST00000541640 NEXN-AS1Q8NBZ9 246 aa9.9□□□□□ -0.82
PRKAB1-206ENST00000541640 DOPEY2Q9Y3R5 2298 aa9.89□□□□□ -0.83
PRKAB1-206ENST00000541640 TRBV25-1A0A075B6N4 114 aa9.89□□□□□ -0.83
PRKAB1-206ENST00000541640 TRAV12-3A0A0B4J271 114 aa9.89□□□□□ -0.83
PRKAB1-206ENST00000541640 ZNF688P0C7X2 276 aa9.89□□□□□ -0.83
PRKAB1-206ENST00000541640 C2orf66Q6UXQ4 117 aa9.89□□□□□ -0.83
PRKAB1-206ENST00000541640 CHAC1Q9BUX1 264 aa9.89□□□□□ -0.83
PRKAB1-206ENST00000541640 CD7P09564 240 aa9.89□□□□□ -0.83
PRKAB1-206ENST00000541640 OCIAD2Q56VL3 154 aa9.89□□□□□ -0.83
PRKAB1-206ENST00000541640 MAPK1IP1LQ8NDC0 245 aa9.89□□□□□ -0.83
PRKAB1-206ENST00000541640 CSTL1Q9H114 145 aa9.89□□□□□ -0.83
PRKAB1-206ENST00000541640 SPG11Q96JI7 2443 aa9.88□□□□□ -0.83
PRKAB1-206ENST00000541640 KRTAP10-9P60411 292 aa9.88□□□□□ -0.83
PRKAB1-206ENST00000541640 WFDC12Q8WWY7 111 aa9.88□□□□□ -0.83
PRKAB1-206ENST00000541640 C9orf85Q96MD7 179 aa9.88□□□□□ -0.83
PRKAB1-206ENST00000541640 ZNF702PQ9H963 129 aa9.88□□□□□ -0.83
PRKAB1-206ENST00000541640 CHTOPQ9Y3Y2 248 aaKnown RBP9.88□□□□□ -0.83
PRKAB1-206ENST00000541640 CENPEQ02224 2701 aa9.88□□□□□ -0.83
PRKAB1-206ENST00000541640 SYNJ2BPP57105 145 aa9.88□□□□□ -0.83
PRKAB1-206ENST00000541640 HIST2H2BCQ6DN03 193 aa9.88□□□□□ -0.83
PRKAB1-206ENST00000541640 UBE2E2Q96LR5 201 aa9.88□□□□□ -0.83
PRKAB1-206ENST00000541640 IGHV4-31P0DP07 118 aa9.87□□□□□ -0.83
PRKAB1-206ENST00000541640 RNF152Q8N8N0 203 aa9.87□□□□□ -0.83
PRKAB1-206ENST00000541640 BAALCQ8WXS3 180 aa9.87□□□□□ -0.83
PRKAB1-206ENST00000541640 IGHV3-16A0A0C4DH30 117 aa9.87□□□□□ -0.83
PRKAB1-206ENST00000541640 POLR2KP53803 58 aaKnown RBP9.87□□□□□ -0.83
PRKAB1-206ENST00000541640 SUMO4Q6EEV6 95 aa9.87□□□□□ -0.83
PRKAB1-206ENST00000541640 MAPKAPK5-AS1Q8N8E1 139 aa9.87□□□□□ -0.83
PRKAB1-206ENST00000541640 JMJD8Q96S16 334 aa9.87□□□□□ -0.83
PRKAB1-206ENST00000541640 JPT2Q9H910 190 aa9.87□□□□□ -0.83
PRKAB1-206ENST00000541640 LINC01549A6NIU2 74 aa9.86□□□□□ -0.83
PRKAB1-206ENST00000541640 H3BUT2 72 aa9.86□□□□□ -0.83
PRKAB1-206ENST00000541640 UFSP1Q6NVU6 142 aa9.86□□□□□ -0.83
PRKAB1-206ENST00000541640 VPS25Q9BRG1 176 aa9.86□□□□□ -0.83
PRKAB1-206ENST00000541640 TM2D2Q9BX73 214 aa9.86□□□□□ -0.83
PRKAB1-206ENST00000541640 GAGE10A6NGK3 116 aa9.85□□□□□ -0.83
PRKAB1-206ENST00000541640 DUSP14O95147 198 aaKnown RBP9.85□□□□□ -0.83
PRKAB1-206ENST00000541640 GCSHP23434 173 aa9.85□□□□□ -0.83
PRKAB1-206ENST00000541640 HOXD3P31249 432 aaPredicted RBP9.85□□□□□ -0.83
PRKAB1-206ENST00000541640 FXYD2P54710 66 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms