RNA–Protein interactions for RNA: ENST00000539975.5

SNHG1-212, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 955 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-212ENST00000539975 NDUFS6O75380 124 aaKnown RBP4.63□□□□□ -1.67
SNHG1-212ENST00000539975 GAGE7O76087 117 aa4.63□□□□□ -1.67
SNHG1-212ENST00000539975 P01737 135 aa4.63□□□□□ -1.67
SNHG1-212ENST00000539975 PRM2P04554 102 aa4.63□□□□□ -1.67
SNHG1-212ENST00000539975 ATP5G1P05496 136 aa4.63□□□□□ -1.67
SNHG1-212ENST00000539975 GAGE12FP0CL80 117 aa4.63□□□□□ -1.67
SNHG1-212ENST00000539975 GAGE12GP0CL81 117 aa4.63□□□□□ -1.67
SNHG1-212ENST00000539975 GAGE12IP0CL82 117 aa4.63□□□□□ -1.67
SNHG1-212ENST00000539975 TCL1AP56279 114 aa4.63□□□□□ -1.67
SNHG1-212ENST00000539975 RPS20P60866 119 aaKnown RBP4.63□□□□□ -1.67
SNHG1-212ENST00000539975 FAM74A3Q4VXF1 159 aa4.63□□□□□ -1.67
SNHG1-212ENST00000539975 PRR9Q5T870 116 aa4.63□□□□□ -1.67
SNHG1-212ENST00000539975 CEMP1Q6PRD7 247 aaPredicted RBP4.63□□□□□ -1.67
SNHG1-212ENST00000539975 PCNPQ8WW12 178 aaKnown RBP4.63□□□□□ -1.67
SNHG1-212ENST00000539975 TVP23CQ96ET8 276 aa4.63□□□□□ -1.67
SNHG1-212ENST00000539975 ZC2HC1AQ96GY0 325 aa4.63□□□□□ -1.67
SNHG1-212ENST00000539975 SMIM7Q9BQ49 75 aa4.63□□□□□ -1.67
SNHG1-212ENST00000539975 TMSB15BA0A087X1C1 80 aa4.62□□□□□ -1.67
SNHG1-212ENST00000539975 RAB19A4D1S5 217 aa4.62□□□□□ -1.67
SNHG1-212ENST00000539975 IGLL5B9A064 214 aa4.62□□□□□ -1.67
SNHG1-212ENST00000539975 C9JCJ5 164 aa4.62□□□□□ -1.67
SNHG1-212ENST00000539975 F5H768 121 aa4.62□□□□□ -1.67
SNHG1-212ENST00000539975 M0R2P5 195 aa4.62□□□□□ -1.67
SNHG1-212ENST00000539975 GNRH2O43555 120 aa4.62□□□□□ -1.67
SNHG1-212ENST00000539975 BTF3P20290 206 aaKnown RBP4.62□□□□□ -1.67
SNHG1-212ENST00000539975 ZNF80P51504 273 aaPredicted RBP4.62□□□□□ -1.67
SNHG1-212ENST00000539975 TCTAP57738 103 aa4.62□□□□□ -1.67
SNHG1-212ENST00000539975 SLAQ13239 276 aa4.62□□□□□ -1.67
SNHG1-212ENST00000539975 TMEM241Q24JQ0 296 aa4.62□□□□□ -1.67
SNHG1-212ENST00000539975 C12orf74Q32Q52 190 aa4.62□□□□□ -1.67
SNHG1-212ENST00000539975 SOHLH1Q5JUK2 328 aa4.62□□□□□ -1.67
SNHG1-212ENST00000539975 CLLU1Q5K131 121 aa4.62□□□□□ -1.67
SNHG1-212ENST00000539975 Q6ZTC4 211 aa4.62□□□□□ -1.67
SNHG1-212ENST00000539975 COX8CQ7Z4L0 72 aa4.62□□□□□ -1.67
SNHG1-212ENST00000539975 FAM210BQ96KR6 192 aa4.62□□□□□ -1.67
SNHG1-212ENST00000539975 DERL1Q9BUN8 251 aa4.62□□□□□ -1.67
SNHG1-212ENST00000539975 PARLQ9H300 379 aa4.62□□□□□ -1.67
SNHG1-212ENST00000539975 TP53TG3Q9ULZ0 132 aa4.62□□□□□ -1.67
SNHG1-212ENST00000539975 PHLDA3Q9Y5J5 127 aa4.62□□□□□ -1.67
SNHG1-212ENST00000539975 TRGV4A0A0C4DH28 118 aa4.61□□□□□ -1.67
SNHG1-212ENST00000539975 IGHV3-16A0A0C4DH30 117 aa4.61□□□□□ -1.67
SNHG1-212ENST00000539975 KRBOX1C9JBD0 128 aa4.61□□□□□ -1.67
SNHG1-212ENST00000539975 CIDEAO60543 219 aa4.61□□□□□ -1.67
SNHG1-212ENST00000539975 TYMSP04818 313 aa4.61□□□□□ -1.67
SNHG1-212ENST00000539975 ERVFC1-1P60608 527 aa4.61□□□□□ -1.67
SNHG1-212ENST00000539975 ZNF876PQ49A33 203 aa4.61□□□□□ -1.67
SNHG1-212ENST00000539975 CASC10Q5T4H9 136 aa4.61□□□□□ -1.67
SNHG1-212ENST00000539975 C15orf54Q8N8G6 183 aa4.61□□□□□ -1.67
SNHG1-212ENST00000539975 OR4C5Q8NGB2 326 aa4.61□□□□□ -1.67
SNHG1-212ENST00000539975 OR2D3Q8NGH3 330 aa4.61□□□□□ -1.67
SNHG1-212ENST00000539975 BORCS7Q96B45 105 aa4.61□□□□□ -1.67
SNHG1-212ENST00000539975 NDUFAF3Q9BU61 184 aa4.61□□□□□ -1.67
SNHG1-212ENST00000539975 MLST8Q9BVC4 326 aa4.61□□□□□ -1.67
SNHG1-212ENST00000539975 TPPP3Q9BW30 176 aa4.61□□□□□ -1.67
SNHG1-212ENST00000539975 MRPL16Q9NX20 251 aaKnown RBP4.61□□□□□ -1.67
SNHG1-212ENST00000539975 MDFICQ9P1T7 246 aa4.61□□□□□ -1.67
SNHG1-212ENST00000539975 CELA1Q9UNI1 258 aa4.61□□□□□ -1.67
SNHG1-212ENST00000539975 LY96Q9Y6Y9 160 aa4.61□□□□□ -1.67
SNHG1-212ENST00000539975 GRIFINA4D1Z8 144 aa4.6□□□□□ -1.67
SNHG1-212ENST00000539975 SPINK4O60575 86 aa4.6□□□□□ -1.67
SNHG1-212ENST00000539975 SRP19P09132 144 aaKnown RBP4.6□□□□□ -1.67
SNHG1-212ENST00000539975 ARMS2P0C7Q2 107 aa4.6□□□□□ -1.67
SNHG1-212ENST00000539975 SMIM17P0DL12 118 aa4.6□□□□□ -1.67
SNHG1-212ENST00000539975 CRIP1P50238 77 aa4.6□□□□□ -1.67
SNHG1-212ENST00000539975 SPANXN1Q5VSR9 72 aa4.6□□□□□ -1.67
SNHG1-212ENST00000539975 CFAP161Q6P656 301 aa4.6□□□□□ -1.67
SNHG1-212ENST00000539975 Q6ZQT7 251 aa4.6□□□□□ -1.67
SNHG1-212ENST00000539975 Q6ZTI0 123 aa4.6□□□□□ -1.67
SNHG1-212ENST00000539975 SLC7A5P1Q8MH63 180 aa4.6□□□□□ -1.67
SNHG1-212ENST00000539975 ZFP82Q8N141 532 aa4.6□□□□□ -1.67
SNHG1-212ENST00000539975 C11orf72Q8NBR9 251 aa4.6□□□□□ -1.67
SNHG1-212ENST00000539975 OCC1Q8TAD7 63 aa4.6□□□□□ -1.67
SNHG1-212ENST00000539975 RASL10AQ92737 203 aa4.6□□□□□ -1.67
SNHG1-212ENST00000539975 IL36BQ9NZH7 164 aa4.6□□□□□ -1.67
SNHG1-212ENST00000539975 NAT8Q9UHE5 227 aa4.6□□□□□ -1.67
SNHG1-212ENST00000539975 IGKV3D-20A0A0C4DH25 116 aa4.59□□□□□ -1.67
SNHG1-212ENST00000539975 A0A1W2PPQ1 181 aa4.59□□□□□ -1.67
SNHG1-212ENST00000539975 PLAC8L1A1L4L8 177 aa4.59□□□□□ -1.67
SNHG1-212ENST00000539975 PGPEP1LA6NFU8 196 aa4.59□□□□□ -1.67
SNHG1-212ENST00000539975 A8MWL6 223 aa4.59□□□□□ -1.67
SNHG1-212ENST00000539975 A8MWV9 139 aa4.59□□□□□ -1.67
SNHG1-212ENST00000539975 F2Z2F3 143 aa4.59□□□□□ -1.67
SNHG1-212ENST00000539975 H3BVH4 76 aa4.59□□□□□ -1.67
SNHG1-212ENST00000539975 M0R381 172 aa4.59□□□□□ -1.67
SNHG1-212ENST00000539975 GATCO43716 136 aaKnown RBP4.59□□□□□ -1.67
SNHG1-212ENST00000539975 IGHV3-53P01767 116 aa4.59□□□□□ -1.67
SNHG1-212ENST00000539975 CXCL1P09341 107 aa4.59□□□□□ -1.67
SNHG1-212ENST00000539975 ADIRFQ15847 76 aa4.59□□□□□ -1.67
SNHG1-212ENST00000539975 PIK3CD-AS1Q5SR53 167 aa4.59□□□□□ -1.67
SNHG1-212ENST00000539975 UQCC3Q6UW78 93 aa4.59□□□□□ -1.67
SNHG1-212ENST00000539975 SMIM15Q7Z3B0 74 aa4.59□□□□□ -1.67
SNHG1-212ENST00000539975 C15orf53Q8NAA6 179 aa4.59□□□□□ -1.67
SNHG1-212ENST00000539975 C18orf15Q96N68 181 aa4.59□□□□□ -1.67
SNHG1-212ENST00000539975 RPP21Q9H633 154 aaKnown RBP4.59□□□□□ -1.67
SNHG1-212ENST00000539975 HHLA3Q9XRX5 114 aa4.59□□□□□ -1.67
SNHG1-212ENST00000539975 IGHV4-4A0A075B6R2 117 aa4.58□□□□□ -1.68
SNHG1-212ENST00000539975 TRAV4A0A0B4J268 109 aa4.58□□□□□ -1.68
SNHG1-212ENST00000539975 RHODO00212 210 aa4.58□□□□□ -1.68
SNHG1-212ENST00000539975 NUDT3O95989 172 aa4.58□□□□□ -1.68
SNHG1-212ENST00000539975 S100A6P06703 90 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms