RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 CTDSP1Q9GZU7 261 aa8.63□□□□□ -1.03
PRKDC-207ENST00000536483 TMPRSS5Q9H3S3 457 aa8.63□□□□□ -1.03
PRKDC-207ENST00000536483 TRGV11A0A075B6L2 103 aa8.62□□□□□ -1.03
PRKDC-207ENST00000536483 TRGV2A0A075B6R0 118 aa8.62□□□□□ -1.03
PRKDC-207ENST00000536483 TRGV1A0A0A0MS02 117 aa8.62□□□□□ -1.03
PRKDC-207ENST00000536483 TRAV8-1A0A0A6YYK1 113 aa8.62□□□□□ -1.03
PRKDC-207ENST00000536483 TRAV21A0A0B4J279 112 aa8.62□□□□□ -1.03
PRKDC-207ENST00000536483 CCL18P55774 89 aa8.62□□□□□ -1.03
PRKDC-207ENST00000536483 SUMO1P63165 101 aaKnown RBP8.62□□□□□ -1.03
PRKDC-207ENST00000536483 ZNF415Q09FC8 603 aa8.62□□□□□ -1.03
PRKDC-207ENST00000536483 SLAQ13239 276 aa8.62□□□□□ -1.03
PRKDC-207ENST00000536483 OR5I1Q13606 314 aa8.62□□□□□ -1.03
PRKDC-207ENST00000536483 FAM159AQ6UWV7 190 aa8.62□□□□□ -1.03
PRKDC-207ENST00000536483 VSIG2Q96IQ7 327 aa8.62□□□□□ -1.03
PRKDC-207ENST00000536483 UPK3BQ9BT76 320 aa8.62□□□□□ -1.03
PRKDC-207ENST00000536483 MDFICQ9P1T7 246 aa8.62□□□□□ -1.03
PRKDC-207ENST00000536483 LINC00588Q9Y4M8 146 aa8.62□□□□□ -1.03
PRKDC-207ENST00000536483 LOC105371267A0A1B0GV96 52 aa8.61□□□□□ -1.03
PRKDC-207ENST00000536483 COLCA2A8K830 154 aa8.61□□□□□ -1.03
PRKDC-207ENST00000536483 K7EQM0 130 aa8.61□□□□□ -1.03
PRKDC-207ENST00000536483 GNG5P63218 68 aa8.61□□□□□ -1.03
PRKDC-207ENST00000536483 TMEM75Q8N9X5 138 aa8.61□□□□□ -1.03
PRKDC-207ENST00000536483 KCNS1Q96KK3 526 aa8.61□□□□□ -1.03
PRKDC-207ENST00000536483 SDF2L1Q9HCN8 221 aa8.61□□□□□ -1.03
PRKDC-207ENST00000536483 NAT8Q9UHE5 227 aa8.61□□□□□ -1.03
PRKDC-207ENST00000536483 IGHV3-16A0A0C4DH30 117 aa8.6□□□□□ -1.03
PRKDC-207ENST00000536483 ZNF727A8MUV8 499 aa8.6□□□□□ -1.03
PRKDC-207ENST00000536483 FGF8P55075 233 aaPredicted RBP8.6□□□□□ -1.03
PRKDC-207ENST00000536483 TMEM241Q24JQ0 296 aa8.6□□□□□ -1.03
PRKDC-207ENST00000536483 MUC21Q5SSG8 566 aa8.6□□□□□ -1.03
PRKDC-207ENST00000536483 COX8CQ7Z4L0 72 aa8.6□□□□□ -1.03
PRKDC-207ENST00000536483 CBLN2Q8IUK8 224 aa8.6□□□□□ -1.03
PRKDC-207ENST00000536483 NDFIP1Q9BT67 221 aa8.6□□□□□ -1.03
PRKDC-207ENST00000536483 PSG8Q9UQ74 426 aa8.6□□□□□ -1.03
PRKDC-207ENST00000536483 A0A096LPF7 62 aa8.59□□□□□ -1.03
PRKDC-207ENST00000536483 FHL2Q14192 279 aa8.59□□□□□ -1.03
PRKDC-207ENST00000536483 ESRGQ1W209 222 aa8.59□□□□□ -1.03
PRKDC-207ENST00000536483 SAPCD1Q5SSQ6 148 aa8.59□□□□□ -1.03
PRKDC-207ENST00000536483 HIST1H2BAQ96A08 127 aa8.59□□□□□ -1.03
PRKDC-207ENST00000536483 PTH2Q96A98 100 aa8.59□□□□□ -1.03
PRKDC-207ENST00000536483 BTF3L4Q96K17 158 aa8.59□□□□□ -1.03
PRKDC-207ENST00000536483 TCEAL7Q9BRU2 100 aa8.59□□□□□ -1.03
PRKDC-207ENST00000536483 PRO0255Q9UI72 69 aa8.59□□□□□ -1.03
PRKDC-207ENST00000536483 GNRH2O43555 120 aa8.58□□□□□ -1.04
PRKDC-207ENST00000536483 PAGE4O60829 102 aa8.58□□□□□ -1.04
PRKDC-207ENST00000536483 PFN1P07737 140 aaKnown RBP8.58□□□□□ -1.04
PRKDC-207ENST00000536483 BTF3P20290 206 aaKnown RBP8.58□□□□□ -1.04
PRKDC-207ENST00000536483 ZNF80P51504 273 aaPredicted RBP8.58□□□□□ -1.04
PRKDC-207ENST00000536483 RAB5BP61020 215 aa8.58□□□□□ -1.04
PRKDC-207ENST00000536483 TMEM183BQ1AE95 376 aa8.58□□□□□ -1.04
PRKDC-207ENST00000536483 SPATA12Q7Z6I5 190 aa8.58□□□□□ -1.04
PRKDC-207ENST00000536483 TMEM183AQ8IXX5 376 aa8.58□□□□□ -1.04
PRKDC-207ENST00000536483 ANAPC16Q96DE5 110 aa8.58□□□□□ -1.04
PRKDC-207ENST00000536483 SMIM7Q9BQ49 75 aa8.58□□□□□ -1.04
PRKDC-207ENST00000536483 Q9H8V8 135 aa8.58□□□□□ -1.04
PRKDC-207ENST00000536483 MRPL16Q9NX20 251 aaKnown RBP8.58□□□□□ -1.04
PRKDC-207ENST00000536483 RPH3ALQ9UNE2 315 aa8.58□□□□□ -1.04
PRKDC-207ENST00000536483 LY96Q9Y6Y9 160 aa8.58□□□□□ -1.04
PRKDC-207ENST00000536483 A0A0J9YY99 117 aa8.57□□□□□ -1.04
PRKDC-207ENST00000536483 TRBV6-1A0A0K0K1D8 114 aa8.57□□□□□ -1.04
PRKDC-207ENST00000536483 C1orf196B1AJZ1 125 aa8.57□□□□□ -1.04
PRKDC-207ENST00000536483 M0R2P5 195 aa8.57□□□□□ -1.04
PRKDC-207ENST00000536483 PPP1R2P9O14990 202 aa8.57□□□□□ -1.04
PRKDC-207ENST00000536483 TYMSP04818 313 aa8.57□□□□□ -1.04
PRKDC-207ENST00000536483 CRYBA4P53673 196 aa8.57□□□□□ -1.04
PRKDC-207ENST00000536483 SMUG1Q53HV7 270 aa8.57□□□□□ -1.04
PRKDC-207ENST00000536483 Q8N1X5 172 aa8.57□□□□□ -1.04
PRKDC-207ENST00000536483 C11orf21Q9P2W6 132 aa8.57□□□□□ -1.04
PRKDC-207ENST00000536483 HHLA3Q9XRX5 114 aa8.57□□□□□ -1.04
PRKDC-207ENST00000536483 MRPS16Q9Y3D3 137 aaKnown RBP8.57□□□□□ -1.04
PRKDC-207ENST00000536483 HERC1Q15751 4861 aa8.57□□□□□ -1.04
PRKDC-207ENST00000536483 TRAV4A0A0B4J268 109 aa8.56□□□□□ -1.04
PRKDC-207ENST00000536483 A0A1W2PPQ1 181 aa8.56□□□□□ -1.04
PRKDC-207ENST00000536483 PAX4O43316 350 aa8.56□□□□□ -1.04
PRKDC-207ENST00000536483 CIDEAO60543 219 aa8.56□□□□□ -1.04
PRKDC-207ENST00000536483 CEBPGP53567 150 aa8.56□□□□□ -1.04
PRKDC-207ENST00000536483 PIK3CD-AS1Q5SR53 167 aa8.56□□□□□ -1.04
PRKDC-207ENST00000536483 C11orf52Q96A22 123 aa8.56□□□□□ -1.04
PRKDC-207ENST00000536483 SGK494Q96LW2 274 aa8.56□□□□□ -1.04
PRKDC-207ENST00000536483 LINC00479Q96M42 142 aa8.56□□□□□ -1.04
PRKDC-207ENST00000536483 YPEL4Q96NS1 127 aa8.56□□□□□ -1.04
PRKDC-207ENST00000536483 KRTAP1-5Q9BYS1 174 aa8.56□□□□□ -1.04
PRKDC-207ENST00000536483 PARLQ9H300 379 aa8.56□□□□□ -1.04
PRKDC-207ENST00000536483 SCRT2Q9NQ03 307 aa8.56□□□□□ -1.04
PRKDC-207ENST00000536483 PEX7O00628 323 aa8.55□□□□□ -1.04
PRKDC-207ENST00000536483 GCGP01275 180 aa8.55□□□□□ -1.04
PRKDC-207ENST00000536483 RAB5AP20339 215 aa8.55□□□□□ -1.04
PRKDC-207ENST00000536483 PRNTQ86SH4 94 aa8.55□□□□□ -1.04
PRKDC-207ENST00000536483 ZNF479Q96JC4 524 aa8.55□□□□□ -1.04
PRKDC-207ENST00000536483 C9orf85Q96MD7 179 aa8.55□□□□□ -1.04
PRKDC-207ENST00000536483 C8orf49Q96NF6 230 aa8.55□□□□□ -1.04
PRKDC-207ENST00000536483 IMMP2LQ96T52 175 aa8.55□□□□□ -1.04
PRKDC-207ENST00000536483 BIN3Q9NQY0 253 aa8.55□□□□□ -1.04
PRKDC-207ENST00000536483 ZFP30Q9Y2G7 519 aa8.55□□□□□ -1.04
PRKDC-207ENST00000536483 ICOSQ9Y6W8 199 aa8.55□□□□□ -1.04
PRKDC-207ENST00000536483 TRBV24-1A0A075B6N3 115 aa8.54□□□□□ -1.04
PRKDC-207ENST00000536483 KRTAP10-2P60368 255 aa8.54□□□□□ -1.04
PRKDC-207ENST00000536483 MRPL23Q16540 153 aaKnown RBP8.54□□□□□ -1.04
PRKDC-207ENST00000536483 TTC32Q5I0X7 151 aa8.54□□□□□ -1.04
PRKDC-207ENST00000536483 DNLZQ5SXM8 178 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms