RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 IGHV4-38-2P0DP08 117 aa13.47□□□□□ -0.25
PHRF1-206ENST00000534320 COA6Q5JTJ3 125 aaKnown RBP13.47□□□□□ -0.25
PHRF1-206ENST00000534320 IGKV1OR2-108A0A075B7D4 117 aa13.47□□□□□ -0.25
PHRF1-206ENST00000534320 F8VRH5 84 aa13.47□□□□□ -0.25
PHRF1-206ENST00000534320 IGHV3-53P01767 116 aa13.47□□□□□ -0.25
PHRF1-206ENST00000534320 ZFP36P26651 326 aaKnown RBP13.47□□□□□ -0.25
PHRF1-206ENST00000534320 TRPT1Q86TN4 253 aaKnown RBP13.47□□□□□ -0.25
PHRF1-206ENST00000534320 TEX22C9J3V5 150 aa13.47□□□□□ -0.25
PHRF1-206ENST00000534320 ATOX1O00244 68 aa13.47□□□□□ -0.25
PHRF1-206ENST00000534320 BRWD1-AS2P59051 145 aa13.47□□□□□ -0.25
PHRF1-206ENST00000534320 ARFGEF3Q5TH69 2177 aa13.47□□□□□ -0.25
PHRF1-206ENST00000534320 C10orf105Q8TEF2 133 aa13.47□□□□□ -0.25
PHRF1-206ENST00000534320 Q8N9W7 124 aa13.46□□□□□ -0.25
PHRF1-206ENST00000534320 MRPL35Q9NZE8 188 aaKnown RBP13.46□□□□□ -0.25
PHRF1-206ENST00000534320 Q6ZVH6 145 aa13.46□□□□□ -0.25
PHRF1-206ENST00000534320 PYGO2Q9BRQ0 406 aa13.46□□□□□ -0.25
PHRF1-206ENST00000534320 TMEM243Q9BU79 118 aa13.46□□□□□ -0.25
PHRF1-206ENST00000534320 LINC00574Q9H8X3 128 aa13.46□□□□□ -0.25
PHRF1-206ENST00000534320 KLK9Q9UKQ9 250 aa13.46□□□□□ -0.25
PHRF1-206ENST00000534320 PTPRQQ9UMZ3 2332 aa13.46□□□□□ -0.25
PHRF1-206ENST00000534320 DYNAPQ8N1N2 210 aa13.46□□□□□ -0.25
PHRF1-206ENST00000534320 FAM167A-AS1Q96KT0 104 aa13.46□□□□□ -0.25
PHRF1-206ENST00000534320 RNF114Q9Y508 228 aa13.46□□□□□ -0.26
PHRF1-206ENST00000534320 PRB1P04280 392 aa13.45□□□□□ -0.26
PHRF1-206ENST00000534320 VPREB3Q9UKI3 123 aa13.45□□□□□ -0.26
PHRF1-206ENST00000534320 DYSFO75923 2080 aa13.45□□□□□ -0.26
PHRF1-206ENST00000534320 KNCNA6PVL3 124 aa13.45□□□□□ -0.26
PHRF1-206ENST00000534320 TRAV26-1A0A087WT03 109 aa13.45□□□□□ -0.26
PHRF1-206ENST00000534320 CTSGP08311 255 aa13.45□□□□□ -0.26
PHRF1-206ENST00000534320 DSCR8Q96T75 97 aa13.45□□□□□ -0.26
PHRF1-206ENST00000534320 CDPF1Q6NVV7 123 aa13.45□□□□□ -0.26
PHRF1-206ENST00000534320 SH2D6Q7Z4S9 175 aa13.45□□□□□ -0.26
PHRF1-206ENST00000534320 IGHV1OR15-1A0A075B7D0 117 aa13.44□□□□□ -0.26
PHRF1-206ENST00000534320 NDUFA12Q9UI09 145 aa13.44□□□□□ -0.26
PHRF1-206ENST00000534320 CFC1BP0CG36 223 aa13.44□□□□□ -0.26
PHRF1-206ENST00000534320 CFC1P0CG37 223 aa13.44□□□□□ -0.26
PHRF1-206ENST00000534320 AGPAT4-IT1Q9H0P7 198 aa13.44□□□□□ -0.26
PHRF1-206ENST00000534320 TRAV12-1A0A0B4J245 112 aa13.44□□□□□ -0.26
PHRF1-206ENST00000534320 SIGLEC8Q9NYZ4 499 aa13.44□□□□□ -0.26
PHRF1-206ENST00000534320 TRAV13-2A0A0B4J235 113 aa13.44□□□□□ -0.26
PHRF1-206ENST00000534320 XCL2Q9UBD3 114 aa13.44□□□□□ -0.26
PHRF1-206ENST00000534320 C5orf47Q569G3 176 aa13.43□□□□□ -0.26
PHRF1-206ENST00000534320 WIPF2Q8TF74 440 aaPredicted RBP13.43□□□□□ -0.26
PHRF1-206ENST00000534320 MRPL36Q9P0J6 103 aaKnown RBP13.43□□□□□ -0.26
PHRF1-206ENST00000534320 TRAV12-2A0A075B6T6 113 aa13.43□□□□□ -0.26
PHRF1-206ENST00000534320 SS18Q15532 418 aa13.43□□□□□ -0.26
PHRF1-206ENST00000534320 TRAV26-2A0A0B4J265 109 aa13.43□□□□□ -0.26
PHRF1-206ENST00000534320 CRYGCP07315 174 aa13.42□□□□□ -0.26
PHRF1-206ENST00000534320 MRPL53Q96EL3 112 aaKnown RBP13.42□□□□□ -0.26
PHRF1-206ENST00000534320 PRSS29PA6NIE9 313 aa13.42□□□□□ -0.26
PHRF1-206ENST00000534320 CRLF1O75462 422 aa13.42□□□□□ -0.26
PHRF1-206ENST00000534320 EGR2P11161 476 aaPredicted RBP13.42□□□□□ -0.26
PHRF1-206ENST00000534320 HOXD3P31249 432 aaPredicted RBP13.42□□□□□ -0.26
PHRF1-206ENST00000534320 BLCAPP62952 87 aa13.42□□□□□ -0.26
PHRF1-206ENST00000534320 FOXI2Q6ZQN5 318 aa13.42□□□□□ -0.26
PHRF1-206ENST00000534320 RBAKDNA6NC62 111 aa13.42□□□□□ -0.26
PHRF1-206ENST00000534320 CACNA1AO00555 2505 aa13.41□□□□□ -0.26
PHRF1-206ENST00000534320 J3QQQ9 107 aa13.41□□□□□ -0.26
PHRF1-206ENST00000534320 ZNF295-AS1Q8N0V1 137 aa13.41□□□□□ -0.26
PHRF1-206ENST00000534320 IGF2BP2-AS1Q96M15 143 aa13.41□□□□□ -0.26
PHRF1-206ENST00000534320 IGLL5B9A064 214 aa13.41□□□□□ -0.26
PHRF1-206ENST00000534320 C5orf56Q8N8D9 126 aa13.41□□□□□ -0.26
PHRF1-206ENST00000534320 DEFB113Q30KQ7 82 aa13.41□□□□□ -0.26
PHRF1-206ENST00000534320 SIRPDQ9H106 197 aa13.41□□□□□ -0.26
PHRF1-206ENST00000534320 ATRXP46100 2492 aa13.41□□□□□ -0.26
PHRF1-206ENST00000534320 TEN1Q86WV5 123 aa13.4□□□□□ -0.26
PHRF1-206ENST00000534320 EIF4EBP1Q13541 118 aaPredicted RBP13.4□□□□□ -0.26
PHRF1-206ENST00000534320 NRGNQ92686 78 aa13.4□□□□□ -0.26
PHRF1-206ENST00000534320 TINCRA0A1B0GVN0 87 aa13.4□□□□□ -0.26
PHRF1-206ENST00000534320 F6UB75 175 aa13.4□□□□□ -0.26
PHRF1-206ENST00000534320 RHODO00212 210 aa13.4□□□□□ -0.26
PHRF1-206ENST00000534320 ZNF747Q9BV97 191 aa13.4□□□□□ -0.27
PHRF1-206ENST00000534320 C1orf229Q6ZS94 237 aaPredicted RBP13.39□□□□□ -0.27
PHRF1-206ENST00000534320 WI2-2373I1.2A0A1W2PRP0 233 aa13.39□□□□□ -0.27
PHRF1-206ENST00000534320 I3L3M4 83 aa13.39□□□□□ -0.27
PHRF1-206ENST00000534320 KLF5Q13887 457 aaPredicted RBP13.39□□□□□ -0.27
PHRF1-206ENST00000534320 LENEPQ9Y5L5 61 aa13.39□□□□□ -0.27
PHRF1-206ENST00000534320 A0A1B0GX51 115 aa13.38□□□□□ -0.27
PHRF1-206ENST00000534320 FAM236AA0A1B0GUQ0 79 aa13.38□□□□□ -0.27
PHRF1-206ENST00000534320 FAM236BA0A1B0GV22 79 aa13.38□□□□□ -0.27
PHRF1-206ENST00000534320 BUB3O43684 328 aa13.38□□□□□ -0.27
PHRF1-206ENST00000534320 BAALC-AS2P0C853 105 aa13.38□□□□□ -0.27
PHRF1-206ENST00000534320 FOXE3Q13461 319 aa13.38□□□□□ -0.27
PHRF1-206ENST00000534320 SDHAF1A6NFY7 115 aa13.38□□□□□ -0.27
PHRF1-206ENST00000534320 CFHR4Q92496 578 aa13.38□□□□□ -0.27
PHRF1-206ENST00000534320 RS1O15537 224 aa13.37□□□□□ -0.27
PHRF1-206ENST00000534320 DKK2Q9UBU2 259 aa13.37□□□□□ -0.27
PHRF1-206ENST00000534320 G3V4G9 280 aa13.37□□□□□ -0.27
PHRF1-206ENST00000534320 SMIM2Q9BVW6 85 aa13.37□□□□□ -0.27
PHRF1-206ENST00000534320 A0A0B4J2C4 111 aa13.36□□□□□ -0.27
PHRF1-206ENST00000534320 AJUBAQ96IF1 538 aa13.36□□□□□ -0.27
PHRF1-206ENST00000534320 PRORYQ9H606 182 aa13.36□□□□□ -0.27
PHRF1-206ENST00000534320 PRSS47A8MTI9 375 aa13.35□□□□□ -0.27
PHRF1-206ENST00000534320 DEFB130BP0DP73 79 aa13.35□□□□□ -0.27
PHRF1-206ENST00000534320 DEFB130AP0DP74 79 aa13.35□□□□□ -0.27
PHRF1-206ENST00000534320 PFN2P35080 140 aa13.35□□□□□ -0.27
PHRF1-206ENST00000534320 LINC01545Q5VT33 79 aa13.35□□□□□ -0.27
PHRF1-206ENST00000534320 SCRT2Q9NQ03 307 aa13.35□□□□□ -0.27
PHRF1-206ENST00000534320 CHD3Q12873 2000 aaKnown RBP13.35□□□□□ -0.27
PHRF1-206ENST00000534320 FOXI1Q12951 378 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 115.5 ms