RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 TMEM183AQ8IXX5 376 aa13.07□□□□□ -0.32
SSH3-209ENST00000532600 UPK3BQ9BT76 320 aa13.07□□□□□ -0.32
SSH3-209ENST00000532600 MED9Q9NWA0 146 aa13.07□□□□□ -0.32
SSH3-209ENST00000532600 MRPL16Q9NX20 251 aaKnown RBP13.07□□□□□ -0.32
SSH3-209ENST00000532600 TRBV20OR9-2A0A075B6H5 130 aa13.06□□□□□ -0.32
SSH3-209ENST00000532600 IGLV2-8P01709 118 aa13.06□□□□□ -0.32
SSH3-209ENST00000532600 PFN1P07737 140 aaKnown RBP13.06□□□□□ -0.32
SSH3-209ENST00000532600 TDRG1Q3Y452 100 aa13.06□□□□□ -0.32
SSH3-209ENST00000532600 BAGE2Q86Y30 109 aa13.06□□□□□ -0.32
SSH3-209ENST00000532600 MDFICQ9P1T7 246 aa13.06□□□□□ -0.32
SSH3-209ENST00000532600 GNRH2O43555 120 aa13.05□□□□□ -0.32
SSH3-209ENST00000532600 SRSF3P84103 164 aaKnown RBP13.05□□□□□ -0.32
SSH3-209ENST00000532600 CENPWQ5EE01 88 aa13.05□□□□□ -0.32
SSH3-209ENST00000532600 MRPS16Q9Y3D3 137 aaKnown RBP13.05□□□□□ -0.32
SSH3-209ENST00000532600 LRP1BQ9NZR2 4599 aa13.04□□□□□ -0.32
SSH3-209ENST00000532600 IGKV3D-20A0A0C4DH25 116 aa13.04□□□□□ -0.32
SSH3-209ENST00000532600 C9JQL5 133 aa13.04□□□□□ -0.32
SSH3-209ENST00000532600 SH2D1AO60880 128 aa13.04□□□□□ -0.32
SSH3-209ENST00000532600 IGHV3-53P01767 116 aa13.04□□□□□ -0.32
SSH3-209ENST00000532600 TYMSP04818 313 aa13.04□□□□□ -0.32
SSH3-209ENST00000532600 FAM159AQ6UWV7 190 aa13.04□□□□□ -0.32
SSH3-209ENST00000532600 ABCA13Q86UQ4 5058 aa13.04□□□□□ -0.32
SSH3-209ENST00000532600 IGHV3-16A0A0C4DH30 117 aa13.03□□□□□ -0.32
SSH3-209ENST00000532600 PGPEP1LA6NFU8 196 aa13.03□□□□□ -0.32
SSH3-209ENST00000532600 ZNF674Q2M3X9 581 aa13.03□□□□□ -0.32
SSH3-209ENST00000532600 EIF5A2Q9GZV4 153 aaKnown RBP13.03□□□□□ -0.32
SSH3-209ENST00000532600 FABP5P3A8MUU1 101 aa13.02□□□□□ -0.33
SSH3-209ENST00000532600 SRP19P09132 144 aaKnown RBP13.02□□□□□ -0.33
SSH3-209ENST00000532600 FHL2Q14192 279 aa13.02□□□□□ -0.33
SSH3-209ENST00000532600 TMEM250H0YL14 139 aa13.01□□□□□ -0.33
SSH3-209ENST00000532600 FAM162BQ5T6X4 162 aa13.01□□□□□ -0.33
SSH3-209ENST00000532600 PARLQ9H300 379 aa13.01□□□□□ -0.33
SSH3-209ENST00000532600 SDF2L1Q9HCN8 221 aa13.01□□□□□ -0.33
SSH3-209ENST00000532600 HSPG2P98160 4391 aa13□□□□□ -0.33
SSH3-209ENST00000532600 TRGV11A0A075B6L2 103 aa13□□□□□ -0.33
SSH3-209ENST00000532600 GNG4P50150 75 aa13□□□□□ -0.33
SSH3-209ENST00000532600 ZNF415Q09FC8 603 aa13□□□□□ -0.33
SSH3-209ENST00000532600 KRBOX1C9JBD0 128 aa12.99□□□□□ -0.33
SSH3-209ENST00000532600 PAX4O43316 350 aa12.99□□□□□ -0.33
SSH3-209ENST00000532600 NDUFS6O75380 124 aaKnown RBP12.99□□□□□ -0.33
SSH3-209ENST00000532600 CRYBA4P53673 196 aa12.99□□□□□ -0.33
SSH3-209ENST00000532600 CLLU1Q5K131 121 aa12.99□□□□□ -0.33
SSH3-209ENST00000532600 KCNS1Q96KK3 526 aa12.99□□□□□ -0.33
SSH3-209ENST00000532600 M0R036 132 aa12.98□□□□□ -0.33
SSH3-209ENST00000532600 CEBPGP53567 150 aa12.98□□□□□ -0.33
SSH3-209ENST00000532600 PRR27Q6MZM9 219 aa12.98□□□□□ -0.33
SSH3-209ENST00000532600 ZNF479Q96JC4 524 aa12.98□□□□□ -0.33
SSH3-209ENST00000532600 PRO0255Q9UI72 69 aa12.98□□□□□ -0.33
SSH3-209ENST00000532600 A0A1W2PPQ1 181 aa12.97□□□□□ -0.33
SSH3-209ENST00000532600 C9JCJ5 164 aa12.97□□□□□ -0.33
SSH3-209ENST00000532600 K7EN84 100 aa12.97□□□□□ -0.33
SSH3-209ENST00000532600 ORM1P02763 201 aa12.97□□□□□ -0.33
SSH3-209ENST00000532600 SFTA3P0C7M3 94 aa12.97□□□□□ -0.33
SSH3-209ENST00000532600 MGST1P10620 155 aaKnown RBP12.97□□□□□ -0.33
SSH3-209ENST00000532600 RNASE3P12724 160 aaKnown RBP12.97□□□□□ -0.33
SSH3-209ENST00000532600 RAB14P61106 215 aa12.97□□□□□ -0.33
SSH3-209ENST00000532600 RPL19P84098 196 aaKnown RBP12.97□□□□□ -0.33
SSH3-209ENST00000532600 LINC01559Q495D7 138 aa12.97□□□□□ -0.33
SSH3-209ENST00000532600 TTC32Q5I0X7 151 aa12.97□□□□□ -0.33
SSH3-209ENST00000532600 RASL10AQ92737 203 aa12.97□□□□□ -0.33
SSH3-209ENST00000532600 HHLA3Q9XRX5 114 aa12.97□□□□□ -0.33
SSH3-209ENST00000532600 DNAH5Q8TE73 4624 aa12.97□□□□□ -0.33
SSH3-209ENST00000532600 TMSB15BA0A087X1C1 80 aa12.96□□□□□ -0.33
SSH3-209ENST00000532600 B4DEV8 164 aa12.96□□□□□ -0.33
SSH3-209ENST00000532600 OCC1Q8TAD7 63 aa12.96□□□□□ -0.33
SSH3-209ENST00000532600 SMIM12Q96EX1 92 aa12.96□□□□□ -0.33
SSH3-209ENST00000532600 C9orf85Q96MD7 179 aa12.96□□□□□ -0.33
SSH3-209ENST00000532600 KRTAP4-5Q9BYR2 181 aa12.96□□□□□ -0.33
SSH3-209ENST00000532600 ICOSQ9Y6W8 199 aa12.96□□□□□ -0.33
SSH3-209ENST00000532600 APOBP04114 4563 aaKnown RBP12.95□□□□□ -0.34
SSH3-209ENST00000532600 GRIFINA4D1Z8 144 aa12.95□□□□□ -0.34
SSH3-209ENST00000532600 C19orf71A6NCJ1 209 aa12.95□□□□□ -0.34
SSH3-209ENST00000532600 LYPD5Q6UWN5 251 aa12.95□□□□□ -0.34
SSH3-209ENST00000532600 Q6ZRN7 208 aaPredicted RBP12.95□□□□□ -0.34
SSH3-209ENST00000532600 SPXQ9BT56 116 aa12.95□□□□□ -0.34
SSH3-209ENST00000532600 C16orf90A8MZG2 172 aa12.94□□□□□ -0.34
SSH3-209ENST00000532600 NXPH4O95158 308 aa12.94□□□□□ -0.34
SSH3-209ENST00000532600 PEA15Q15121 130 aa12.94□□□□□ -0.34
SSH3-209ENST00000532600 LINC00315P59091 139 aa12.93□□□□□ -0.34
SSH3-209ENST00000532600 KRTAP10-2P60368 255 aa12.93□□□□□ -0.34
SSH3-209ENST00000532600 DNLZQ5SXM8 178 aa12.93□□□□□ -0.34
SSH3-209ENST00000532600 SMIM7Q9BQ49 75 aa12.93□□□□□ -0.34
SSH3-209ENST00000532600 K7EQD1 137 aa12.92□□□□□ -0.34
SSH3-209ENST00000532600 M0R2P5 195 aa12.92□□□□□ -0.34
SSH3-209ENST00000532600 SIVA1O15304 175 aa12.92□□□□□ -0.34
SSH3-209ENST00000532600 ASIPP42127 132 aa12.92□□□□□ -0.34
SSH3-209ENST00000532600 SLAQ13239 276 aa12.92□□□□□ -0.34
SSH3-209ENST00000532600 SPATA12Q7Z6I5 190 aa12.92□□□□□ -0.34
SSH3-209ENST00000532600 TRGV4A0A0C4DH28 118 aa12.91□□□□□ -0.34
SSH3-209ENST00000532600 H3BVH4 76 aa12.91□□□□□ -0.34
SSH3-209ENST00000532600 MRPL23Q16540 153 aaKnown RBP12.91□□□□□ -0.34
SSH3-209ENST00000532600 SMDT1Q9H4I9 107 aa12.91□□□□□ -0.34
SSH3-209ENST00000532600 TNFRSF18Q9Y5U5 241 aa12.91□□□□□ -0.34
SSH3-209ENST00000532600 TRAV4A0A0B4J268 109 aa12.9□□□□□ -0.34
SSH3-209ENST00000532600 ZNF727A8MUV8 499 aa12.9□□□□□ -0.34
SSH3-209ENST00000532600 ARMS2P0C7Q2 107 aa12.9□□□□□ -0.34
SSH3-209ENST00000532600 BTF3P20290 206 aaKnown RBP12.9□□□□□ -0.34
SSH3-209ENST00000532600 NUDT10Q8NFP7 164 aa12.9□□□□□ -0.34
SSH3-209ENST00000532600 NUDT11Q96G61 164 aa12.9□□□□□ -0.34
SSH3-209ENST00000532600 RNASE7Q9H1E1 156 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms