RNA–Protein interactions for RNA: ENST00000530640.6

CTSB-219, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTSB, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-219ENST00000530640 ALMS1Q8TCU4 4167 aa11.2□□□□□ -0.62
CTSB-219ENST00000530640 MED14OSP0DP75 135 aa11.19□□□□□ -0.62
CTSB-219ENST00000530640 RNASE3P12724 160 aaKnown RBP11.19□□□□□ -0.62
CTSB-219ENST00000530640 FOXA3P55318 350 aaPredicted RBP11.19□□□□□ -0.62
CTSB-219ENST00000530640 RNASE8Q8TDE3 154 aaKnown RBP11.19□□□□□ -0.62
CTSB-219ENST00000530640 X6R8D5 127 aa11.19□□□□□ -0.62
CTSB-219ENST00000530640 IGHV3OR16-12A0A075B7B8 117 aa11.18□□□□□ -0.62
CTSB-219ENST00000530640 LOC105371267A0A1B0GV96 52 aa11.18□□□□□ -0.62
CTSB-219ENST00000530640 GRIFINA4D1Z8 144 aa11.18□□□□□ -0.62
CTSB-219ENST00000530640 CBY3A6NI87 242 aa11.18□□□□□ -0.62
CTSB-219ENST00000530640 HIGD1CA8MV81 97 aa11.18□□□□□ -0.62
CTSB-219ENST00000530640 GNRH2O43555 120 aa11.18□□□□□ -0.62
CTSB-219ENST00000530640 SNAI2O43623 268 aa11.18□□□□□ -0.62
CTSB-219ENST00000530640 PRM2P04554 102 aa11.18□□□□□ -0.62
CTSB-219ENST00000530640 ASIPP42127 132 aa11.18□□□□□ -0.62
CTSB-219ENST00000530640 C11orf72Q8NBR9 251 aa11.18□□□□□ -0.62
CTSB-219ENST00000530640 OR11H2Q8NH07 326 aa11.18□□□□□ -0.62
CTSB-219ENST00000530640 C9orf85Q96MD7 179 aa11.18□□□□□ -0.62
CTSB-219ENST00000530640 SSBP4Q9BWG4 385 aaPredicted RBP11.18□□□□□ -0.62
CTSB-219ENST00000530640 SCRT2Q9NQ03 307 aa11.18□□□□□ -0.62
CTSB-219ENST00000530640 A0A1W2PPQ1 181 aa11.17□□□□□ -0.62
CTSB-219ENST00000530640 H3BVH4 76 aa11.17□□□□□ -0.62
CTSB-219ENST00000530640 OR5AL1P0C617 328 aa11.17□□□□□ -0.62
CTSB-219ENST00000530640 TCL1AP56279 114 aa11.17□□□□□ -0.62
CTSB-219ENST00000530640 CBLN2Q8IUK8 224 aa11.17□□□□□ -0.62
CTSB-219ENST00000530640 FER1L6-AS1Q8NA97 138 aa11.17□□□□□ -0.62
CTSB-219ENST00000530640 TMEM263Q8WUH6 116 aaKnown RBP11.17□□□□□ -0.62
CTSB-219ENST00000530640 YPEL4Q96NS1 127 aa11.17□□□□□ -0.62
CTSB-219ENST00000530640 CNFNQ9BYD5 112 aa11.17□□□□□ -0.62
CTSB-219ENST00000530640 MDFICQ9P1T7 246 aa11.17□□□□□ -0.62
CTSB-219ENST00000530640 NAT8BQ9UHF3 227 aa11.17□□□□□ -0.62
CTSB-219ENST00000530640 PLAC8L1A1L4L8 177 aa11.16□□□□□ -0.62
CTSB-219ENST00000530640 AZU1P20160 251 aa11.16□□□□□ -0.62
CTSB-219ENST00000530640 TMEM88Q6PEY1 159 aa11.16□□□□□ -0.62
CTSB-219ENST00000530640 NUP35Q8NFH5 326 aa11.16□□□□□ -0.62
CTSB-219ENST00000530640 C11orf68Q9H3H3 251 aaKnown RBP11.16□□□□□ -0.62
CTSB-219ENST00000530640 SMIM9A6NGZ8 99 aa11.16□□□□□ -0.62
CTSB-219ENST00000530640 HTN1P15515 57 aa11.16□□□□□ -0.62
CTSB-219ENST00000530640 ZNF415Q09FC8 603 aa11.16□□□□□ -0.62
CTSB-219ENST00000530640 KCNIP4Q6PIL6 250 aa11.16□□□□□ -0.62
CTSB-219ENST00000530640 C16orf74Q96GX8 76 aa11.16□□□□□ -0.62
CTSB-219ENST00000530640 SMCO4Q9NRQ5 59 aa11.16□□□□□ -0.62
CTSB-219ENST00000530640 TRAV9-1A0A075B6T8 112 aa11.15□□□□□ -0.63
CTSB-219ENST00000530640 NXPH4O95158 308 aa11.15□□□□□ -0.63
CTSB-219ENST00000530640 ARMS2P0C7Q2 107 aa11.15□□□□□ -0.63
CTSB-219ENST00000530640 S100A4P26447 101 aaKnown RBP11.15□□□□□ -0.63
CTSB-219ENST00000530640 FAM3BP58499 235 aaPredicted RBP11.15□□□□□ -0.63
CTSB-219ENST00000530640 RRN3P1Q2M238 152 aa11.15□□□□□ -0.63
CTSB-219ENST00000530640 ZNF493Q6ZR52 646 aa11.15□□□□□ -0.63
CTSB-219ENST00000530640 URGCP-MRPS24S4R325 110 aa11.15□□□□□ -0.63
CTSB-219ENST00000530640 F2Z2F3 143 aa11.14□□□□□ -0.63
CTSB-219ENST00000530640 S100PP25815 95 aa11.14□□□□□ -0.63
CTSB-219ENST00000530640 ELOBQ15370 118 aa11.14□□□□□ -0.63
CTSB-219ENST00000530640 LGALS9CQ6DKI2 356 aa11.14□□□□□ -0.63
CTSB-219ENST00000530640 LYZL1Q6UWQ5 148 aa11.14□□□□□ -0.63
CTSB-219ENST00000530640 Q8NAQ8 132 aa11.14□□□□□ -0.63
CTSB-219ENST00000530640 OR10AG1Q8NH19 301 aa11.14□□□□□ -0.63
CTSB-219ENST00000530640 PGLYRP4Q96LB8 373 aa11.14□□□□□ -0.63
CTSB-219ENST00000530640 GSN-AS1Q9NRJ2 163 aa11.14□□□□□ -0.63
CTSB-219ENST00000530640 IGHV4-4A0A075B6R2 117 aa11.13□□□□□ -0.63
CTSB-219ENST00000530640 DEFB4AO15263 64 aa11.13□□□□□ -0.63
CTSB-219ENST00000530640 MIFP14174 115 aa11.13□□□□□ -0.63
CTSB-219ENST00000530640 TCTAP57738 103 aa11.13□□□□□ -0.63
CTSB-219ENST00000530640 C11orf45Q8TAV5 145 aa11.13□□□□□ -0.63
CTSB-219ENST00000530640 TPPP3Q9BW30 176 aa11.13□□□□□ -0.63
CTSB-219ENST00000530640 A0A1B0GXF2 115 aa11.12□□□□□ -0.63
CTSB-219ENST00000530640 PHLDA1Q8WV24 401 aaPredicted RBP11.12□□□□□ -0.63
CTSB-219ENST00000530640 BTF3L4Q96K17 158 aa11.12□□□□□ -0.63
CTSB-219ENST00000530640 TRBV24-1A0A075B6N3 115 aa11.11□□□□□ -0.63
CTSB-219ENST00000530640 IGHV4-28A0A0C4DH34 117 aa11.11□□□□□ -0.63
CTSB-219ENST00000530640 A0A1B0GUT8 65 aa11.11□□□□□ -0.63
CTSB-219ENST00000530640 NANOS2P60321 138 aaKnown RBP11.11□□□□□ -0.63
CTSB-219ENST00000530640 DAZ2Q13117 558 aaKnown RBP11.11□□□□□ -0.63
CTSB-219ENST00000530640 WDR73Q6P4I2 378 aa11.11□□□□□ -0.63
CTSB-219ENST00000530640 ATP5L2Q7Z4Y8 100 aa11.11□□□□□ -0.63
CTSB-219ENST00000530640 PTH2Q96A98 100 aa11.11□□□□□ -0.63
CTSB-219ENST00000530640 SPXQ9BT56 116 aa11.11□□□□□ -0.63
CTSB-219ENST00000530640 PHLDA3Q9Y5J5 127 aa11.11□□□□□ -0.63
CTSB-219ENST00000530640 TIMM8BQ9Y5J9 83 aaPredicted RBP11.11□□□□□ -0.63
CTSB-219ENST00000530640 MUC4Q99102 2169 aa11.11□□□□□ -0.63
CTSB-219ENST00000530640 CACNG7P62955 275 aa11.1□□□□□ -0.63
CTSB-219ENST00000530640 ZFP82Q8N141 532 aa11.1□□□□□ -0.63
CTSB-219ENST00000530640 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.1□□□□□ -0.63
CTSB-219ENST00000530640 TGIF2-C20orf24A0A0A6YYL0 155 aa11.09□□□□□ -0.63
CTSB-219ENST00000530640 MUC21A0A0G2JKD1 596 aa11.09□□□□□ -0.63
CTSB-219ENST00000530640 MUC21A0A140T8X8 626 aa11.09□□□□□ -0.63
CTSB-219ENST00000530640 SNURFLB1AK76 121 aa11.09□□□□□ -0.63
CTSB-219ENST00000530640 M0R2P5 195 aa11.09□□□□□ -0.63
CTSB-219ENST00000530640 SPINK4O60575 86 aa11.09□□□□□ -0.63
CTSB-219ENST00000530640 PIK3CD-AS1Q5SR53 167 aa11.09□□□□□ -0.63
CTSB-219ENST00000530640 MRPL54Q6P161 138 aaKnown RBP11.09□□□□□ -0.63
CTSB-219ENST00000530640 BORCS7Q96B45 105 aa11.09□□□□□ -0.63
CTSB-219ENST00000530640 M0R381 172 aa11.08□□□□□ -0.64
CTSB-219ENST00000530640 RIGQ13278 110 aa11.08□□□□□ -0.64
CTSB-219ENST00000530640 SPANXN1Q5VSR9 72 aa11.08□□□□□ -0.64
CTSB-219ENST00000530640 DMRTA1Q5VZB9 504 aa11.08□□□□□ -0.64
CTSB-219ENST00000530640 RASL11AQ6T310 242 aa11.08□□□□□ -0.64
CTSB-219ENST00000530640 GATD1Q8NB37 220 aa11.08□□□□□ -0.64
CTSB-219ENST00000530640 NDUFAF3Q9BU61 184 aa11.08□□□□□ -0.64
CTSB-219ENST00000530640 KMT2AQ03164 3969 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms