RNA–Protein interactions for RNA: ENST00000530579.6

NEDD8-MDP1-201, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 2

Gene NEDD8-MDP1, Length 471 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-201ENST00000530579 MRPL54Q6P161 138 aaKnown RBP6.14□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 SYT8Q8NBV8 401 aa6.14□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 OR10AG1Q8NH19 301 aa6.14□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 TMEM263Q8WUH6 116 aaKnown RBP6.14□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 C16orf74Q96GX8 76 aa6.14□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 SPXQ9BT56 116 aa6.14□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 SSBP4Q9BWG4 385 aaPredicted RBP6.14□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 NOTCH3Q9UM47 2321 aa6.13□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 TRAV9-1A0A075B6T8 112 aa6.13□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 TGIF2-C20orf24A0A0A6YYL0 155 aa6.13□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 IGHV4-28A0A0C4DH34 117 aa6.13□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 DEFB4AO15263 64 aa6.13□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 SNAI2O43623 268 aa6.13□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 MIFP14174 115 aa6.13□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 NTF3P20783 257 aa6.13□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 CTRLP40313 264 aa6.13□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 CAMPP49913 170 aa6.13□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 RAB4BP61018 213 aa6.13□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 ELOBQ15370 118 aa6.13□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 ZNF876PQ49A33 203 aa6.13□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 WDR73Q6P4I2 378 aa6.13□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 ZFP82Q8N141 532 aa6.13□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 C11orf72Q8NBR9 251 aa6.13□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 RNASE8Q8TDE3 154 aaKnown RBP6.13□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 C9orf85Q96MD7 179 aa6.13□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 SPATA25Q9BR10 227 aa6.13□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 NOP10Q9NPE3 64 aaKnown RBP6.13□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 SCRT2Q9NQ03 307 aa6.13□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 TRGV1A0A0A0MS02 117 aa6.12□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 M0R2P5 195 aa6.12□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 DMRTA1Q5VZB9 504 aa6.12□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 SMIM15Q7Z3B0 74 aa6.12□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.12□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 FAM210BQ96KR6 192 aa6.12□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 ZMAT4Q9H898 229 aa6.12□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 MRPL16Q9NX20 251 aaKnown RBP6.12□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 MSRB1Q9NZV6 116 aa6.12□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 SORL1Q92673 2214 aa6.11□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 IGHV4-4A0A075B6R2 117 aa6.11□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 A0A1B0GW15 77 aa6.11□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 S100A8P05109 93 aa6.11□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 HBBP68871 147 aa6.11□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 DAZ2Q13117 558 aaKnown RBP6.11□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 ATP5L2Q7Z4Y8 100 aa6.11□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 YPEL4Q96NS1 127 aa6.11□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 B9D2Q9BPU9 175 aa6.11□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 TM2D3Q9BRN9 247 aa6.11□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 AGRNO00468 2067 aa6.11□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 TRBV24-1A0A075B6N3 115 aa6.1□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 GAGE12BA1L429 117 aa6.1□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 PLAC8L1A1L4L8 177 aa6.1□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 COLCA2A8K830 154 aa6.1□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 GAGE7O76087 117 aa6.1□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 TRGC1P0CF51 173 aa6.1□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 GAGE12FP0CL80 117 aa6.1□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 GAGE12GP0CL81 117 aa6.1□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 GAGE12IP0CL82 117 aa6.1□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 SMIM17P0DL12 118 aa6.1□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 DEFB130BP0DP73 79 aa6.1□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 DEFB130AP0DP74 79 aa6.1□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 LGALS9BQ3B8N2 356 aa6.1□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 Q6ZTI0 123 aa6.1□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 C14orf178Q8N769 122 aaPredicted RBP6.1□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 Q8NAQ8 132 aa6.1□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 PTH2Q96A98 100 aa6.1□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 CNFNQ9BYD5 112 aa6.1□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 TRGV2A0A075B6R0 118 aa6.09□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 A0A087WWL8 130 aa6.09□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 A0A1B0GXF2 115 aa6.09□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 LYRM9A8MSI8 78 aa6.09□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 NXPH4O95158 308 aa6.09□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 SPART-AS1P0CW21 52 aa6.09□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 RAB5AP20339 215 aa6.09□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 EVI2AP22794 236 aa6.09□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 RPS10P46783 165 aaKnown RBP6.09□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 COX19Q49B96 90 aa6.09□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 FAM222AQ5U5X8 452 aa6.09□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 RASL11AQ6T310 242 aa6.09□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 IL17DQ8TAD2 202 aa6.09□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 RASL10AQ92737 203 aa6.09□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 FRZBQ92765 325 aa6.09□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 AP1S3Q96PC3 154 aa6.09□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 JPT2Q9H910 190 aa6.09□□□□□ -1.43
NEDD8-MDP1-201ENST00000530579 IGHV3-73A0A0B4J1V6 119 aa6.08□□□□□ -1.44
NEDD8-MDP1-201ENST00000530579 A0A0J9YWU9 116 aa6.08□□□□□ -1.44
NEDD8-MDP1-201ENST00000530579 A8MWV9 139 aa6.08□□□□□ -1.44
NEDD8-MDP1-201ENST00000530579 F5H697 171 aa6.08□□□□□ -1.44
NEDD8-MDP1-201ENST00000530579 RS1O15537 224 aa6.08□□□□□ -1.44
NEDD8-MDP1-201ENST00000530579 IGHV3-53P01767 116 aa6.08□□□□□ -1.44
NEDD8-MDP1-201ENST00000530579 MGPP08493 103 aa6.08□□□□□ -1.44
NEDD8-MDP1-201ENST00000530579 NHLRC4P0CG21 123 aaPredicted RBP6.08□□□□□ -1.44
NEDD8-MDP1-201ENST00000530579 FABP9Q0Z7S8 132 aa6.08□□□□□ -1.44
NEDD8-MDP1-201ENST00000530579 FAM74A4Q5TZK3 123 aa6.08□□□□□ -1.44
NEDD8-MDP1-201ENST00000530579 TMEM136Q6ZRR5 245 aa6.08□□□□□ -1.44
NEDD8-MDP1-201ENST00000530579 OR4C5Q8NGB2 326 aa6.08□□□□□ -1.44
NEDD8-MDP1-201ENST00000530579 GNB1LQ9BYB4 327 aa6.08□□□□□ -1.44
NEDD8-MDP1-201ENST00000530579 SAMD10Q9BYL1 202 aa6.08□□□□□ -1.44
NEDD8-MDP1-201ENST00000530579 TMEM191AQ9H0A3 160 aa6.08□□□□□ -1.44
NEDD8-MDP1-201ENST00000530579 DKK2Q9UBU2 259 aa6.08□□□□□ -1.44
NEDD8-MDP1-201ENST00000530579 TRAPPC1Q9Y5R8 145 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms