RNA–Protein interactions for RNA: ENST00000528739.5

CAPN1-216, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-216ENST00000528739 FAM162BQ5T6X4 162 aa9.83□□□□□ -0.84
CAPN1-216ENST00000528739 CFAP126Q5VTH2 177 aa9.83□□□□□ -0.84
CAPN1-216ENST00000528739 C9orf85Q96MD7 179 aa9.83□□□□□ -0.84
CAPN1-216ENST00000528739 GNG13Q9P2W3 67 aa9.83□□□□□ -0.84
CAPN1-216ENST00000528739 SCO2A0A1W2PP80 73 aa9.82□□□□□ -0.84
CAPN1-216ENST00000528739 H3BVH4 76 aa9.82□□□□□ -0.84
CAPN1-216ENST00000528739 RNASE3P12724 160 aaKnown RBP9.82□□□□□ -0.84
CAPN1-216ENST00000528739 TCTE3Q8IZS6 198 aa9.82□□□□□ -0.84
CAPN1-216ENST00000528739 TRAV9-2A0A087WT02 112 aa9.81□□□□□ -0.84
CAPN1-216ENST00000528739 A0A1W2PPQ1 181 aa9.81□□□□□ -0.84
CAPN1-216ENST00000528739 CIDEAO60543 219 aa9.81□□□□□ -0.84
CAPN1-216ENST00000528739 S100A9P06702 114 aaKnown RBP9.81□□□□□ -0.84
CAPN1-216ENST00000528739 GATA1P15976 413 aaPredicted RBP9.81□□□□□ -0.84
CAPN1-216ENST00000528739 CRIP1P50238 77 aa9.81□□□□□ -0.84
CAPN1-216ENST00000528739 RAB5CP51148 216 aa9.81□□□□□ -0.84
CAPN1-216ENST00000528739 SH2D6Q7Z4S9 175 aa9.81□□□□□ -0.84
CAPN1-216ENST00000528739 BAGE2Q86Y30 109 aa9.81□□□□□ -0.84
CAPN1-216ENST00000528739 SYT8Q8NBV8 401 aa9.81□□□□□ -0.84
CAPN1-216ENST00000528739 MUC4Q99102 2169 aa9.81□□□□□ -0.84
CAPN1-216ENST00000528739 KRBOX1C9JBD0 128 aa9.8□□□□□ -0.84
CAPN1-216ENST00000528739 LTAP01374 205 aa9.8□□□□□ -0.84
CAPN1-216ENST00000528739 ARMS2P0C7Q2 107 aa9.8□□□□□ -0.84
CAPN1-216ENST00000528739 RHOHQ15669 191 aa9.8□□□□□ -0.84
CAPN1-216ENST00000528739 Q6ZNX1 250 aa9.8□□□□□ -0.84
CAPN1-216ENST00000528739 AKAP14Q86UN6 197 aa9.8□□□□□ -0.84
CAPN1-216ENST00000528739 SLC25A29Q8N8R3 303 aa9.8□□□□□ -0.84
CAPN1-216ENST00000528739 KRTAP1-5Q9BYS1 174 aa9.8□□□□□ -0.84
CAPN1-216ENST00000528739 PHLDA3Q9Y5J5 127 aa9.8□□□□□ -0.84
CAPN1-216ENST00000528739 LY96Q9Y6Y9 160 aa9.8□□□□□ -0.84
CAPN1-216ENST00000528739 DNAH2Q9P225 4427 aa9.79□□□□□ -0.84
CAPN1-216ENST00000528739 TRBV6-1A0A0K0K1D8 114 aa9.79□□□□□ -0.84
CAPN1-216ENST00000528739 A8MWV9 139 aa9.79□□□□□ -0.84
CAPN1-216ENST00000528739 C1QBP02746 253 aa9.79□□□□□ -0.84
CAPN1-216ENST00000528739 PRR27Q6MZM9 219 aa9.79□□□□□ -0.84
CAPN1-216ENST00000528739 MANBALQ9NQG1 85 aa9.79□□□□□ -0.84
CAPN1-216ENST00000528739 IL36BQ9NZH7 164 aa9.79□□□□□ -0.84
CAPN1-216ENST00000528739 TRBV6-4A0A1B0GX49 114 aa9.78□□□□□ -0.84
CAPN1-216ENST00000528739 M0R381 172 aa9.78□□□□□ -0.84
CAPN1-216ENST00000528739 MGST1P10620 155 aaKnown RBP9.78□□□□□ -0.84
CAPN1-216ENST00000528739 EVI2AP22794 236 aa9.78□□□□□ -0.84
CAPN1-216ENST00000528739 LINC00315P59091 139 aa9.78□□□□□ -0.84
CAPN1-216ENST00000528739 CCL20P78556 96 aa9.78□□□□□ -0.84
CAPN1-216ENST00000528739 ZNF674Q2M3X9 581 aa9.78□□□□□ -0.84
CAPN1-216ENST00000528739 FAM74A4Q5TZK3 123 aa9.78□□□□□ -0.84
CAPN1-216ENST00000528739 DMRTA1Q5VZB9 504 aa9.78□□□□□ -0.84
CAPN1-216ENST00000528739 SLC51BQ86UW2 128 aa9.78□□□□□ -0.84
CAPN1-216ENST00000528739 WFDC10BQ8IUB3 73 aa9.78□□□□□ -0.84
CAPN1-216ENST00000528739 PTH2Q96A98 100 aa9.78□□□□□ -0.84
CAPN1-216ENST00000528739 IFNA1P01562 189 aa9.77□□□□□ -0.85
CAPN1-216ENST00000528739 SULT1A2P50226 295 aa9.77□□□□□ -0.85
CAPN1-216ENST00000528739 OR10J3Q5JRS4 329 aa9.77□□□□□ -0.85
CAPN1-216ENST00000528739 PARLQ9H300 379 aa9.77□□□□□ -0.85
CAPN1-216ENST00000528739 JPT2Q9H910 190 aa9.77□□□□□ -0.85
CAPN1-216ENST00000528739 TRAV8-6A0A0B4J262 113 aa9.76□□□□□ -0.85
CAPN1-216ENST00000528739 GAGE12JA6NER3 117 aa9.76□□□□□ -0.85
CAPN1-216ENST00000528739 C16orf90A8MZG2 172 aa9.76□□□□□ -0.85
CAPN1-216ENST00000528739 SSTP61278 116 aa9.76□□□□□ -0.85
CAPN1-216ENST00000528739 GAGE1Q13065 139 aa9.76□□□□□ -0.85
CAPN1-216ENST00000528739 GAGE4Q13068 117 aa9.76□□□□□ -0.85
CAPN1-216ENST00000528739 GAGE5Q13069 117 aa9.76□□□□□ -0.85
CAPN1-216ENST00000528739 LINC01559Q495D7 138 aa9.76□□□□□ -0.85
CAPN1-216ENST00000528739 GAGE13Q4V321 117 aa9.76□□□□□ -0.85
CAPN1-216ENST00000528739 COX8CQ7Z4L0 72 aa9.76□□□□□ -0.85
CAPN1-216ENST00000528739 ZNF575Q86XF7 245 aa9.76□□□□□ -0.85
CAPN1-216ENST00000528739 ATP6V0E2Q8NHE4 81 aa9.76□□□□□ -0.85
CAPN1-216ENST00000528739 A0A087WWL8 130 aa9.75□□□□□ -0.85
CAPN1-216ENST00000528739 RPL35P42766 123 aaKnown RBP9.75□□□□□ -0.85
CAPN1-216ENST00000528739 RPL19P84098 196 aaKnown RBP9.75□□□□□ -0.85
CAPN1-216ENST00000528739 ZFP2Q6ZN57 461 aa9.75□□□□□ -0.85
CAPN1-216ENST00000528739 ZFP82Q8N141 532 aa9.75□□□□□ -0.85
CAPN1-216ENST00000528739 DAZAP1Q96EP5 407 aaKnown RBP9.75□□□□□ -0.85
CAPN1-216ENST00000528739 SAMD10Q9BYL1 202 aa9.75□□□□□ -0.85
CAPN1-216ENST00000528739 TNFRSF18Q9Y5U5 241 aa9.75□□□□□ -0.85
CAPN1-216ENST00000528739 FAT2Q9NYQ8 4349 aa9.74□□□□□ -0.85
CAPN1-216ENST00000528739 TRAV1-1A0A0B4J248 108 aa9.74□□□□□ -0.85
CAPN1-216ENST00000528739 RHODO00212 210 aa9.74□□□□□ -0.85
CAPN1-216ENST00000528739 CRYGDP07320 174 aa9.74□□□□□ -0.85
CAPN1-216ENST00000528739 BTF3P20290 206 aaKnown RBP9.74□□□□□ -0.85
CAPN1-216ENST00000528739 PIK3CD-AS1Q5SR53 167 aa9.74□□□□□ -0.85
CAPN1-216ENST00000528739 DNLZQ5SXM8 178 aa9.74□□□□□ -0.85
CAPN1-216ENST00000528739 Q6ZSN1 163 aa9.74□□□□□ -0.85
CAPN1-216ENST00000528739 SPATA12Q7Z6I5 190 aa9.74□□□□□ -0.85
CAPN1-216ENST00000528739 NFE4Q86UQ8 179 aa9.74□□□□□ -0.85
CAPN1-216ENST00000528739 DNAH17Q9UFH2 4485 aa9.73□□□□□ -0.85
CAPN1-216ENST00000528739 IGHV3-38A0A0C4DH36 116 aa9.73□□□□□ -0.85
CAPN1-216ENST00000528739 EREGO14944 169 aa9.73□□□□□ -0.85
CAPN1-216ENST00000528739 MED14OSP0DP75 135 aa9.73□□□□□ -0.85
CAPN1-216ENST00000528739 DERL1Q9BUN8 251 aa9.73□□□□□ -0.85
CAPN1-216ENST00000528739 GTSF1LQ9H1H1 148 aa9.73□□□□□ -0.85
CAPN1-216ENST00000528739 MED9Q9NWA0 146 aa9.73□□□□□ -0.85
CAPN1-216ENST00000528739 HECTD4Q9Y4D8 3996 aa9.73□□□□□ -0.85
CAPN1-216ENST00000528739 MUC21A0A0G2JKD1 596 aa9.72□□□□□ -0.85
CAPN1-216ENST00000528739 MUC21A0A140T8X8 626 aa9.72□□□□□ -0.85
CAPN1-216ENST00000528739 IGHV3-30P01768 117 aa9.72□□□□□ -0.85
CAPN1-216ENST00000528739 IGHV3-33P01772 117 aa9.72□□□□□ -0.85
CAPN1-216ENST00000528739 IGHV3-30-3P0DP02 117 aa9.72□□□□□ -0.85
CAPN1-216ENST00000528739 IGHV3-30-5P0DP03 117 aa9.72□□□□□ -0.85
CAPN1-216ENST00000528739 CENPWQ5EE01 88 aa9.72□□□□□ -0.85
CAPN1-216ENST00000528739 SPANXN1Q5VSR9 72 aa9.72□□□□□ -0.85
CAPN1-216ENST00000528739 C10orf126Q8N4M7 172 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms