RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 GAGE1Q13065 139 aa11.56□□□□□ -0.56
USP47-207ENST00000527733 GAGE4Q13068 117 aa11.56□□□□□ -0.56
USP47-207ENST00000527733 GAGE5Q13069 117 aa11.56□□□□□ -0.56
USP47-207ENST00000527733 GAGE13Q4V321 117 aa11.56□□□□□ -0.56
USP47-207ENST00000527733 RNF152Q8N8N0 203 aa11.55□□□□□ -0.56
USP47-207ENST00000527733 Q8N8P6 123 aa11.55□□□□□ -0.56
USP47-207ENST00000527733 VWC2LB2RUY7 222 aa11.55□□□□□ -0.56
USP47-207ENST00000527733 SYS1-DBNDD2H3BUS1 97 aa11.55□□□□□ -0.56
USP47-207ENST00000527733 AVPP01185 164 aa11.54□□□□□ -0.56
USP47-207ENST00000527733 LY6G6DO95868 133 aa11.54□□□□□ -0.56
USP47-207ENST00000527733 MTORP42345 2549 aa11.54□□□□□ -0.56
USP47-207ENST00000527733 FABP2P12104 132 aa11.54□□□□□ -0.56
USP47-207ENST00000527733 MORN3Q6PF18 240 aaPredicted RBP11.54□□□□□ -0.56
USP47-207ENST00000527733 TRAV26-2A0A0B4J265 109 aa11.54□□□□□ -0.56
USP47-207ENST00000527733 RNF151Q2KHN1 245 aa11.53□□□□□ -0.56
USP47-207ENST00000527733 I3L3M4 83 aa11.53□□□□□ -0.56
USP47-207ENST00000527733 MRPL16Q9NX20 251 aaKnown RBP11.53□□□□□ -0.56
USP47-207ENST00000527733 C2orf66Q6UXQ4 117 aa11.53□□□□□ -0.56
USP47-207ENST00000527733 PLNP26678 52 aa11.52□□□□□ -0.56
USP47-207ENST00000527733 ZNRF2Q8NHG8 242 aa11.52□□□□□ -0.56
USP47-207ENST00000527733 SORL1Q92673 2214 aa11.52□□□□□ -0.56
USP47-207ENST00000527733 NPYP01303 97 aa11.52□□□□□ -0.57
USP47-207ENST00000527733 INSL3P51460 131 aa11.52□□□□□ -0.57
USP47-207ENST00000527733 ZNF493Q6ZR52 646 aa11.52□□□□□ -0.57
USP47-207ENST00000527733 DPH3Q96FX2 82 aa11.52□□□□□ -0.57
USP47-207ENST00000527733 PSMG3-AS1Q96PY0 264 aa11.52□□□□□ -0.57
USP47-207ENST00000527733 LGALS9O00182 355 aa11.52□□□□□ -0.57
USP47-207ENST00000527733 RPL24P83731 157 aaKnown RBP11.52□□□□□ -0.57
USP47-207ENST00000527733 SMIM2Q9BVW6 85 aa11.52□□□□□ -0.57
USP47-207ENST00000527733 UBE2DNLQ8IWF7 75 aa11.51□□□□□ -0.57
USP47-207ENST00000527733 OR13C6PQ8NH95 151 aa11.51□□□□□ -0.57
USP47-207ENST00000527733 VPS25Q9BRG1 176 aa11.51□□□□□ -0.57
USP47-207ENST00000527733 U3KQE9 123 aa11.51□□□□□ -0.57
USP47-207ENST00000527733 FN1P02751 2386 aaKnown RBP11.51□□□□□ -0.57
USP47-207ENST00000527733 TRBV6-1A0A0K0K1D8 114 aa11.51□□□□□ -0.57
USP47-207ENST00000527733 ZNF815PA8K554 130 aa11.51□□□□□ -0.57
USP47-207ENST00000527733 NOP10Q9NPE3 64 aaKnown RBP11.51□□□□□ -0.57
USP47-207ENST00000527733 TP53TG1Q9Y2A0 90 aa11.51□□□□□ -0.57
USP47-207ENST00000527733 C2CD3Q4AC94 2353 aa11.51□□□□□ -0.57
USP47-207ENST00000527733 SMIM13P0DJ93 91 aa11.5□□□□□ -0.57
USP47-207ENST00000527733 DEFB1P60022 68 aa11.5□□□□□ -0.57
USP47-207ENST00000527733 GAGE10A6NGK3 116 aa11.5□□□□□ -0.57
USP47-207ENST00000527733 PYY3Q5JQD4 70 aa11.5□□□□□ -0.57
USP47-207ENST00000527733 NDUFA11Q86Y39 141 aa11.5□□□□□ -0.57
USP47-207ENST00000527733 SIGLEC8Q9NYZ4 499 aa11.5□□□□□ -0.57
USP47-207ENST00000527733 C20orf78Q9BR46 151 aa11.5□□□□□ -0.57
USP47-207ENST00000527733 A0A0J9YX75 114 aa11.5□□□□□ -0.57
USP47-207ENST00000527733 ZFAND3Q9H8U3 227 aa11.5□□□□□ -0.57
USP47-207ENST00000527733 ZNF702PQ9H963 129 aa11.5□□□□□ -0.57
USP47-207ENST00000527733 MRPS16Q9Y3D3 137 aaKnown RBP11.5□□□□□ -0.57
USP47-207ENST00000527733 C10orf99Q6UWK7 81 aa11.49□□□□□ -0.57
USP47-207ENST00000527733 TRBV25-1A0A075B6N4 114 aa11.49□□□□□ -0.57
USP47-207ENST00000527733 TRAV13-1A0A0B4J241 112 aa11.49□□□□□ -0.57
USP47-207ENST00000527733 IGHV3-64A0A075B6Q5 118 aa11.49□□□□□ -0.57
USP47-207ENST00000527733 RNASE1P07998 156 aaKnown RBP11.49□□□□□ -0.57
USP47-207ENST00000527733 PSMB8P28062 276 aa11.49□□□□□ -0.57
USP47-207ENST00000527733 ZC2HC1BQ5TFG8 222 aa11.49□□□□□ -0.57
USP47-207ENST00000527733 PCSK5Q92824 1860 aa11.49□□□□□ -0.57
USP47-207ENST00000527733 NDUFAF3Q9BU61 184 aa11.48□□□□□ -0.57
USP47-207ENST00000527733 PLEKHB2Q96CS7 222 aa11.48□□□□□ -0.57
USP47-207ENST00000527733 SPRY2O43597 315 aa11.48□□□□□ -0.57
USP47-207ENST00000527733 PIFOQ8TCI5 191 aa11.48□□□□□ -0.57
USP47-207ENST00000527733 HILS1P60008 231 aa11.47□□□□□ -0.57
USP47-207ENST00000527733 APOMO95445 188 aa11.47□□□□□ -0.57
USP47-207ENST00000527733 TANC2Q9HCD6 1990 aa11.47□□□□□ -0.57
USP47-207ENST00000527733 NEGR1Q7Z3B1 354 aa11.47□□□□□ -0.57
USP47-207ENST00000527733 TMEM141Q96I45 108 aa11.47□□□□□ -0.57
USP47-207ENST00000527733 IGHV3-38A0A0C4DH36 116 aa11.46□□□□□ -0.57
USP47-207ENST00000527733 TRBV7-9A0A0J9YWB2 115 aa11.46□□□□□ -0.57
USP47-207ENST00000527733 hDV102S1A0JD36 115 aa11.46□□□□□ -0.57
USP47-207ENST00000527733 RASL10AQ92737 203 aa11.46□□□□□ -0.57
USP47-207ENST00000527733 FOSL1P15407 271 aa11.46□□□□□ -0.57
USP47-207ENST00000527733 DMRTA1Q5VZB9 504 aa11.46□□□□□ -0.57
USP47-207ENST00000527733 Q6ZS46 218 aa11.46□□□□□ -0.57
USP47-207ENST00000527733 LINC01006Q8NI28 216 aa11.46□□□□□ -0.57
USP47-207ENST00000527733 TMEM243Q9BU79 118 aa11.46□□□□□ -0.57
USP47-207ENST00000527733 ZMAT4Q9H898 229 aa11.46□□□□□ -0.57
USP47-207ENST00000527733 RHOHQ15669 191 aa11.46□□□□□ -0.58
USP47-207ENST00000527733 C16orf74Q96GX8 76 aa11.46□□□□□ -0.58
USP47-207ENST00000527733 MSRB1Q9NZV6 116 aa11.46□□□□□ -0.58
USP47-207ENST00000527733 K7EQG2 157 aa11.45□□□□□ -0.58
USP47-207ENST00000527733 Q8N1Y9 231 aa11.45□□□□□ -0.58
USP47-207ENST00000527733 GTSF1Q8WW33 167 aa11.45□□□□□ -0.58
USP47-207ENST00000527733 PAX4O43316 350 aa11.45□□□□□ -0.58
USP47-207ENST00000527733 SS18Q15532 418 aa11.45□□□□□ -0.58
USP47-207ENST00000527733 MAP6D1Q9H9H5 199 aa11.45□□□□□ -0.58
USP47-207ENST00000527733 DEFB114Q30KQ6 69 aa11.45□□□□□ -0.58
USP47-207ENST00000527733 NACAE9PAV3 2078 aa11.44□□□□□ -0.58
USP47-207ENST00000527733 IGHV1-24A0A0C4DH33 117 aa11.44□□□□□ -0.58
USP47-207ENST00000527733 IGLV1-40P01703 118 aa11.44□□□□□ -0.58
USP47-207ENST00000527733 HLA-DRB4P13762 266 aa11.44□□□□□ -0.58
USP47-207ENST00000527733 CKS1BP61024 79 aa11.44□□□□□ -0.58
USP47-207ENST00000527733 HLA-DRB4X5D2U9 266 aa11.44□□□□□ -0.58
USP47-207ENST00000527733 KLF5Q13887 457 aaPredicted RBP11.44□□□□□ -0.58
USP47-207ENST00000527733 ADAMTSL5Q6ZMM2 481 aa11.44□□□□□ -0.58
USP47-207ENST00000527733 RAI1Q7Z5J4 1906 aaPredicted RBP11.44□□□□□ -0.58
USP47-207ENST00000527733 C19orf71A6NCJ1 209 aa11.44□□□□□ -0.58
USP47-207ENST00000527733 A0A0U1RRA0 63 aa11.43□□□□□ -0.58
USP47-207ENST00000527733 PMVKQ15126 192 aa11.43□□□□□ -0.58
USP47-207ENST00000527733 C20orf144Q9BQM9 153 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 262.1 ms