RNA–Protein interactions for RNA: ENST00000527619.5

SOX6-208, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-208ENST00000527619 M0R3E3 92 aa5.77□□□□□ -1.49
SOX6-208ENST00000527619 GATA1P15976 413 aaPredicted RBP5.77□□□□□ -1.49
SOX6-208ENST00000527619 PMAIP1Q13794 54 aa5.77□□□□□ -1.49
SOX6-208ENST00000527619 EBI3Q14213 229 aa5.77□□□□□ -1.49
SOX6-208ENST00000527619 VMA21Q3ZAQ7 101 aa5.77□□□□□ -1.49
SOX6-208ENST00000527619 LINC00311Q8N616 119 aa5.77□□□□□ -1.49
SOX6-208ENST00000527619 CNFNQ9BYD5 112 aa5.77□□□□□ -1.49
SOX6-208ENST00000527619 MSRB1Q9NZV6 116 aa5.77□□□□□ -1.49
SOX6-208ENST00000527619 LINC00527Q9UJ94 153 aa5.77□□□□□ -1.49
SOX6-208ENST00000527619 FRYQ5TBA9 3013 aa5.77□□□□□ -1.49
SOX6-208ENST00000527619 TIMM23O14925 209 aa5.77□□□□□ -1.49
SOX6-208ENST00000527619 TMEM155Q4W5P6 130 aa5.77□□□□□ -1.49
SOX6-208ENST00000527619 FAM201AQ5SY85 155 aa5.77□□□□□ -1.49
SOX6-208ENST00000527619 NDUFA11Q86Y39 141 aa5.77□□□□□ -1.49
SOX6-208ENST00000527619 WFDC11Q8NEX6 87 aa5.77□□□□□ -1.49
SOX6-208ENST00000527619 C10orf105Q8TEF2 133 aa5.77□□□□□ -1.49
SOX6-208ENST00000527619 AAMDCQ9H7C9 122 aa5.77□□□□□ -1.49
SOX6-208ENST00000527619 ZNF815PA8K554 130 aa5.76□□□□□ -1.49
SOX6-208ENST00000527619 SLC25A20O43772 301 aa5.76□□□□□ -1.49
SOX6-208ENST00000527619 ZNF56Q15929 161 aa5.76□□□□□ -1.49
SOX6-208ENST00000527619 SCGB1D4Q6XE38 83 aa5.76□□□□□ -1.49
SOX6-208ENST00000527619 LINC00482Q8N8I6 264 aa5.76□□□□□ -1.49
SOX6-208ENST00000527619 C11orf45Q8TAV5 145 aa5.76□□□□□ -1.49
SOX6-208ENST00000527619 GAFA1Q96PS6 74 aa5.76□□□□□ -1.49
SOX6-208ENST00000527619 PRR14LQ5THK1 2151 aa5.76□□□□□ -1.49
SOX6-208ENST00000527619 DNAJC13O75165 2243 aa5.76□□□□□ -1.49
SOX6-208ENST00000527619 DSCAMO60469 2012 aa5.76□□□□□ -1.49
SOX6-208ENST00000527619 RAI1Q7Z5J4 1906 aaPredicted RBP5.76□□□□□ -1.49
SOX6-208ENST00000527619 HLA-DMBP28068 263 aa5.76□□□□□ -1.49
SOX6-208ENST00000527619 EFNA4P52798 201 aa5.76□□□□□ -1.49
SOX6-208ENST00000527619 MRGPRG-AS1Q2M3A8 158 aa5.76□□□□□ -1.49
SOX6-208ENST00000527619 BRK1Q8WUW1 75 aa5.76□□□□□ -1.49
SOX6-208ENST00000527619 CEP250Q9BV73 2442 aa5.76□□□□□ -1.49
SOX6-208ENST00000527619 MRPS12O15235 138 aaKnown RBP5.75□□□□□ -1.49
SOX6-208ENST00000527619 RPL27AP46776 148 aaKnown RBP5.75□□□□□ -1.49
SOX6-208ENST00000527619 PDE6HQ13956 83 aa5.75□□□□□ -1.49
SOX6-208ENST00000527619 CEMP1Q6PRD7 247 aaPredicted RBP5.75□□□□□ -1.49
SOX6-208ENST00000527619 NBEAQ8NFP9 2946 aa5.75□□□□□ -1.49
SOX6-208ENST00000527619 PRR25Q96S07 402 aa5.75□□□□□ -1.49
SOX6-208ENST00000527619 CNOT1A5YKK6 2376 aaKnown RBP5.75□□□□□ -1.49
SOX6-208ENST00000527619 SPRY3O43610 288 aa5.75□□□□□ -1.49
SOX6-208ENST00000527619 APELAP0DMC3 54 aa5.75□□□□□ -1.49
SOX6-208ENST00000527619 ZNF575Q86XF7 245 aa5.75□□□□□ -1.49
SOX6-208ENST00000527619 Q8N1Y9 231 aa5.75□□□□□ -1.49
SOX6-208ENST00000527619 CCL13Q99616 98 aa5.75□□□□□ -1.49
SOX6-208ENST00000527619 IGKV2-40A0A087WW87 121 aaPredicted RBP5.74□□□□□ -1.49
SOX6-208ENST00000527619 IGKV2D-40P01614 121 aaPredicted RBP5.74□□□□□ -1.49
SOX6-208ENST00000527619 WT1P19544 449 aaPredicted RBP5.74□□□□□ -1.49
SOX6-208ENST00000527619 ZNF80P51504 273 aaPredicted RBP5.74□□□□□ -1.49
SOX6-208ENST00000527619 FAM216BQ8N7L0 139 aa5.74□□□□□ -1.49
SOX6-208ENST00000527619 CCL24O00175 119 aa5.74□□□□□ -1.49
SOX6-208ENST00000527619 AVPP01185 164 aa5.74□□□□□ -1.49
SOX6-208ENST00000527619 PSMB8P28062 276 aa5.74□□□□□ -1.49
SOX6-208ENST00000527619 DEFB108BQ8NET1 73 aa5.74□□□□□ -1.49
SOX6-208ENST00000527619 DEFB127Q9H1M4 99 aa5.74□□□□□ -1.49
SOX6-208ENST00000527619 SPRR3Q9UBC9 169 aa5.74□□□□□ -1.49
SOX6-208ENST00000527619 RNF7Q9UBF6 113 aa5.74□□□□□ -1.49
SOX6-208ENST00000527619 SPTBN4Q9H254 2564 aa5.74□□□□□ -1.49
SOX6-208ENST00000527619 IGHV1-18A0A0C4DH31 117 aa5.73□□□□□ -1.49
SOX6-208ENST00000527619 IGKV1-17P01599 117 aa5.73□□□□□ -1.49
SOX6-208ENST00000527619 IGLV1-44P01699 117 aa5.73□□□□□ -1.49
SOX6-208ENST00000527619 CFC1BP0CG36 223 aa5.73□□□□□ -1.49
SOX6-208ENST00000527619 CFC1P0CG37 223 aa5.73□□□□□ -1.49
SOX6-208ENST00000527619 COX6B1P14854 86 aa5.73□□□□□ -1.49
SOX6-208ENST00000527619 SLC25A16P16260 332 aa5.73□□□□□ -1.49
SOX6-208ENST00000527619 MSMPQ1L6U9 139 aa5.73□□□□□ -1.49
SOX6-208ENST00000527619 IGFL2Q6UWQ7 119 aa5.73□□□□□ -1.49
SOX6-208ENST00000527619 NRACQ8N912 160 aa5.73□□□□□ -1.49
SOX6-208ENST00000527619 PSMG3-AS1Q96PY0 264 aa5.73□□□□□ -1.49
SOX6-208ENST00000527619 CTSZQ9UBR2 303 aa5.73□□□□□ -1.49
SOX6-208ENST00000527619 DMXL1Q9Y485 3027 aa5.73□□□□□ -1.49
SOX6-208ENST00000527619 ARFGEF3Q5TH69 2177 aa5.73□□□□□ -1.49
SOX6-208ENST00000527619 TRAV17A0A0B4J275 112 aa5.73□□□□□ -1.49
SOX6-208ENST00000527619 I3L2K1 104 aa5.73□□□□□ -1.49
SOX6-208ENST00000527619 HERVK_113P61574 105 aa5.73□□□□□ -1.49
SOX6-208ENST00000527619 NEXN-AS1Q8NBZ9 246 aa5.73□□□□□ -1.49
SOX6-208ENST00000527619 NTN5Q8WTR8 489 aaPredicted RBP5.73□□□□□ -1.49
SOX6-208ENST00000527619 SCGB3A1Q96QR1 104 aa5.73□□□□□ -1.49
SOX6-208ENST00000527619 SVILO95425 2214 aa5.73□□□□□ -1.49
SOX6-208ENST00000527619 TRGV5A0A0B4J1U4 118 aa5.72□□□□□ -1.49
SOX6-208ENST00000527619 Q8TAT8 98 aa5.72□□□□□ -1.49
SOX6-208ENST00000527619 DPH3P1Q9H4G8 78 aa5.72□□□□□ -1.49
SOX6-208ENST00000527619 PRO1854Q9UHT4 67 aa5.72□□□□□ -1.49
SOX6-208ENST00000527619 LGALS9O00182 355 aa5.72□□□□□ -1.49
SOX6-208ENST00000527619 NTN3O00634 580 aaPredicted RBP5.72□□□□□ -1.49
SOX6-208ENST00000527619 RPL13AP40429 203 aaKnown RBP5.72□□□□□ -1.49
SOX6-208ENST00000527619 CRIP2P52943 208 aaPredicted RBP5.72□□□□□ -1.49
SOX6-208ENST00000527619 ZNF491Q8N8L2 437 aa5.72□□□□□ -1.49
SOX6-208ENST00000527619 TOMM6Q96B49 74 aa5.72□□□□□ -1.49
SOX6-208ENST00000527619 SPTBN2O15020 2390 aa5.72□□□□□ -1.49
SOX6-208ENST00000527619 A0A0J9YY99 117 aa5.71□□□□□ -1.49
SOX6-208ENST00000527619 FAM240AA0A1B0GVK7 77 aa5.71□□□□□ -1.49
SOX6-208ENST00000527619 IGHV3-30P01768 117 aa5.71□□□□□ -1.49
SOX6-208ENST00000527619 TRGV3P03979 118 aa5.71□□□□□ -1.49
SOX6-208ENST00000527619 ZNF883P0CG24 379 aa5.71□□□□□ -1.49
SOX6-208ENST00000527619 IGHV3-30-5P0DP03 117 aa5.71□□□□□ -1.49
SOX6-208ENST00000527619 CCL3L1P16619 93 aa5.71□□□□□ -1.49
SOX6-208ENST00000527619 ORMDL2Q53FV1 153 aa5.71□□□□□ -1.49
SOX6-208ENST00000527619 CNEP1R1Q8N9A8 125 aa5.71□□□□□ -1.49
SOX6-208ENST00000527619 CYSTM1Q9H1C7 97 aa5.71□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 134.4 ms