RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 NRACQ8N912 160 aa9.58□□□□□ -0.88
CAPN1-208ENST00000527323 METTL26Q96S19 204 aa9.58□□□□□ -0.88
CAPN1-208ENST00000527323 ZFAND3Q9H8U3 227 aa9.58□□□□□ -0.88
CAPN1-208ENST00000527323 G3V318 75 aa9.57□□□□□ -0.88
CAPN1-208ENST00000527323 SH2D6Q7Z4S9 175 aa9.57□□□□□ -0.88
CAPN1-208ENST00000527323 Q8N6K4 173 aa9.57□□□□□ -0.88
CAPN1-208ENST00000527323 SCGB3A1Q96QR1 104 aa9.57□□□□□ -0.88
CAPN1-208ENST00000527323 SIGMAR1Q99720 223 aa9.57□□□□□ -0.88
CAPN1-208ENST00000527323 OR11H12B2RN74 326 aa9.57□□□□□ -0.88
CAPN1-208ENST00000527323 M0R381 172 aa9.57□□□□□ -0.88
CAPN1-208ENST00000527323 ATP6V0E1O15342 81 aa9.57□□□□□ -0.88
CAPN1-208ENST00000527323 PLNP26678 52 aa9.57□□□□□ -0.88
CAPN1-208ENST00000527323 ETDBQ3ZM63 59 aa9.57□□□□□ -0.88
CAPN1-208ENST00000527323 OR11H1Q8NG94 326 aa9.57□□□□□ -0.88
CAPN1-208ENST00000527323 OR11H2Q8NH07 326 aa9.57□□□□□ -0.88
CAPN1-208ENST00000527323 FAM110DQ8TAY7 271 aaPredicted RBP9.57□□□□□ -0.88
CAPN1-208ENST00000527323 C16orf92Q96LL3 132 aa9.57□□□□□ -0.88
CAPN1-208ENST00000527323 IGHV7-4-1A0A0J9YVY3 117 aa9.57□□□□□ -0.88
CAPN1-208ENST00000527323 F8W1H4 67 aa9.57□□□□□ -0.88
CAPN1-208ENST00000527323 AZU1P20160 251 aa9.57□□□□□ -0.88
CAPN1-208ENST00000527323 C8orf86Q6ZUL3 223 aa9.57□□□□□ -0.88
CAPN1-208ENST00000527323 TSSC4Q9Y5U2 329 aaPredicted RBP9.57□□□□□ -0.88
CAPN1-208ENST00000527323 AGRNO00468 2067 aa9.56□□□□□ -0.88
CAPN1-208ENST00000527323 OOSP1A8MZH6 123 aa9.56□□□□□ -0.88
CAPN1-208ENST00000527323 H7C1H1 209 aa9.56□□□□□ -0.88
CAPN1-208ENST00000527323 S100A4P26447 101 aaKnown RBP9.56□□□□□ -0.88
CAPN1-208ENST00000527323 LCNL1Q6ZST4 164 aa9.56□□□□□ -0.88
CAPN1-208ENST00000527323 PSMG3-AS1Q96PY0 264 aa9.56□□□□□ -0.88
CAPN1-208ENST00000527323 CYSLTR1Q9Y271 337 aa9.56□□□□□ -0.88
CAPN1-208ENST00000527323 MINOS1Q5TGZ0 78 aa9.56□□□□□ -0.88
CAPN1-208ENST00000527323 MINOS1-NBL1R4GNA1 71 aa9.56□□□□□ -0.88
CAPN1-208ENST00000527323 TRAV8-2A0A0B4J237 113 aa9.55□□□□□ -0.88
CAPN1-208ENST00000527323 TAL2Q16559 108 aa9.55□□□□□ -0.88
CAPN1-208ENST00000527323 IGHV4-30-2A0A087WSY4 118 aa9.55□□□□□ -0.88
CAPN1-208ENST00000527323 CLPSL1A2RUU4 121 aa9.55□□□□□ -0.88
CAPN1-208ENST00000527323 LINC01548A6NM66 108 aa9.55□□□□□ -0.88
CAPN1-208ENST00000527323 F8VRH5 84 aa9.55□□□□□ -0.88
CAPN1-208ENST00000527323 EBI3Q14213 229 aa9.55□□□□□ -0.88
CAPN1-208ENST00000527323 GAGE13Q4V321 117 aa9.55□□□□□ -0.88
CAPN1-208ENST00000527323 EEF1AKMT3Q96AZ1 226 aa9.55□□□□□ -0.88
CAPN1-208ENST00000527323 SMIM2Q9BVW6 85 aa9.55□□□□□ -0.88
CAPN1-208ENST00000527323 COX6B1P14854 86 aa9.54□□□□□ -0.88
CAPN1-208ENST00000527323 ATP6V0BQ99437 205 aa9.54□□□□□ -0.88
CAPN1-208ENST00000527323 OTOGQ6ZRI0 2925 aa9.54□□□□□ -0.88
CAPN1-208ENST00000527323 IGHV4-61A0A0C4DH41 118 aa9.54□□□□□ -0.88
CAPN1-208ENST00000527323 GAGE12HA6NDE8 117 aa9.54□□□□□ -0.88
CAPN1-208ENST00000527323 MGPP08493 103 aa9.54□□□□□ -0.88
CAPN1-208ENST00000527323 HLA-DRB4P13762 266 aa9.54□□□□□ -0.88
CAPN1-208ENST00000527323 CD300EQ496F6 205 aaPredicted RBP9.54□□□□□ -0.88
CAPN1-208ENST00000527323 CCDC140Q96MF4 163 aa9.54□□□□□ -0.88
CAPN1-208ENST00000527323 SPANXB1Q9NS25 103 aaPredicted RBP9.54□□□□□ -0.88
CAPN1-208ENST00000527323 HLA-DRB4X5D2U9 266 aa9.54□□□□□ -0.88
CAPN1-208ENST00000527323 MYMXA0A1B0GTQ4 84 aa9.54□□□□□ -0.88
CAPN1-208ENST00000527323 IGF1P05019 195 aa9.54□□□□□ -0.88
CAPN1-208ENST00000527323 RRN3P1Q2M238 152 aa9.53□□□□□ -0.88
CAPN1-208ENST00000527323 ORMDL2Q53FV1 153 aa9.53□□□□□ -0.88
CAPN1-208ENST00000527323 MRAP2Q96G30 205 aa9.53□□□□□ -0.88
CAPN1-208ENST00000527323 NIPBLQ6KC79 2804 aaeCLIP9.53□□□□□ -0.88
CAPN1-208ENST00000527323 HOXA3O43365 443 aaPredicted RBP9.53□□□□□ -0.88
CAPN1-208ENST00000527323 C14orf178Q8N769 122 aaPredicted RBP9.53□□□□□ -0.88
CAPN1-208ENST00000527323 A0A1B0GWB2 263 aa9.52□□□□□ -0.88
CAPN1-208ENST00000527323 SUMO2P61956 95 aaKnown RBP9.52□□□□□ -0.88
CAPN1-208ENST00000527323 SCGB1D4Q6XE38 83 aa9.52□□□□□ -0.88
CAPN1-208ENST00000527323 BRD3OSQ6XYD6 125 aa9.52□□□□□ -0.88
CAPN1-208ENST00000527323 C9orf47Q6ZRZ4 202 aa9.52□□□□□ -0.88
CAPN1-208ENST00000527323 LINC00527Q9UJ94 153 aa9.52□□□□□ -0.88
CAPN1-208ENST00000527323 PDZD2O15018 2839 aa9.52□□□□□ -0.89
CAPN1-208ENST00000527323 ATP5G2Q06055 141 aa9.52□□□□□ -0.89
CAPN1-208ENST00000527323 RPL39LQ96EH5 51 aaKnown RBP9.52□□□□□ -0.89
CAPN1-208ENST00000527323 SPAG8Q99932 426 aaPredicted RBP9.52□□□□□ -0.89
CAPN1-208ENST00000527323 PHLDA3Q9Y5J5 127 aa9.52□□□□□ -0.89
CAPN1-208ENST00000527323 RPL11P62913 178 aaKnown RBP9.52□□□□□ -0.89
CAPN1-208ENST00000527323 SRSF9Q13242 221 aaKnown RBP eCLIP9.52□□□□□ -0.89
CAPN1-208ENST00000527323 PRR9Q5T870 116 aa9.52□□□□□ -0.89
CAPN1-208ENST00000527323 SFTA2Q6UW10 78 aa9.52□□□□□ -0.89
CAPN1-208ENST00000527323 PIMREGQ9BSJ6 248 aa9.52□□□□□ -0.89
CAPN1-208ENST00000527323 CIDEAO60543 219 aa9.51□□□□□ -0.89
CAPN1-208ENST00000527323 DEFB104AQ8WTQ1 72 aa9.51□□□□□ -0.89
CAPN1-208ENST00000527323 TRBV7-3A0A075B6L6 115 aa9.51□□□□□ -0.89
CAPN1-208ENST00000527323 TRAV12-1A0A0B4J245 112 aa9.51□□□□□ -0.89
CAPN1-208ENST00000527323 C4orf48Q5BLP8 95 aa9.51□□□□□ -0.89
CAPN1-208ENST00000527323 MRPL53Q96EL3 112 aaKnown RBP9.51□□□□□ -0.89
CAPN1-208ENST00000527323 MRPL16Q9NX20 251 aaKnown RBP9.51□□□□□ -0.89
CAPN1-208ENST00000527323 IGKV3-7A0A075B6H7 116 aa9.5□□□□□ -0.89
CAPN1-208ENST00000527323 IGHV4-4A0A075B6R2 117 aa9.5□□□□□ -0.89
CAPN1-208ENST00000527323 TRBV7-1A0A0A6YYK4 115 aa9.5□□□□□ -0.89
CAPN1-208ENST00000527323 ZNF815PA8K554 130 aa9.5□□□□□ -0.89
CAPN1-208ENST00000527323 SAA4P35542 130 aa9.5□□□□□ -0.89
CAPN1-208ENST00000527323 DEFB1P60022 68 aa9.5□□□□□ -0.89
CAPN1-208ENST00000527323 C2orf66Q6UXQ4 117 aa9.5□□□□□ -0.89
CAPN1-208ENST00000527323 PGPEP1Q9NXJ5 209 aa9.5□□□□□ -0.89
CAPN1-208ENST00000527323 WNK1Q9H4A3 2382 aa9.5□□□□□ -0.89
CAPN1-208ENST00000527323 OR10J6PQ8NGY7 276 aa9.5□□□□□ -0.89
CAPN1-208ENST00000527323 RASL10AQ92737 203 aa9.5□□□□□ -0.89
CAPN1-208ENST00000527323 TOMM6Q96B49 74 aa9.5□□□□□ -0.89
CAPN1-208ENST00000527323 PRADC1Q9BSG0 188 aa9.5□□□□□ -0.89
CAPN1-208ENST00000527323 LOC107984156A0A0G2JMH3 177 aa9.5□□□□□ -0.89
CAPN1-208ENST00000527323 PRSS29PA6NIE9 313 aa9.5□□□□□ -0.89
CAPN1-208ENST00000527323 PLA2G2AP14555 144 aa9.5□□□□□ -0.89
CAPN1-208ENST00000527323 ASIPP42127 132 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms