RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-223ENST00000524033 DKK2Q9UBU2 259 aa5.97□□□□□ -1.45
SPIDR-223ENST00000524033 HHLA3Q9XRX5 114 aa5.97□□□□□ -1.45
SPIDR-223ENST00000524033 TIMM8BQ9Y5J9 83 aaPredicted RBP5.97□□□□□ -1.45
SPIDR-223ENST00000524033 HILPDAQ9Y5L2 63 aa5.97□□□□□ -1.45
SPIDR-223ENST00000524033 VWFP04275 2813 aa5.96□□□□□ -1.46
SPIDR-223ENST00000524033 IGKV2D-26A0A0A0MRZ7 120 aa5.96□□□□□ -1.46
SPIDR-223ENST00000524033 LINC01619G3V211 115 aa5.96□□□□□ -1.46
SPIDR-223ENST00000524033 ATP5LO75964 103 aa5.96□□□□□ -1.46
SPIDR-223ENST00000524033 GAS8-AS1O95177 125 aa5.96□□□□□ -1.46
SPIDR-223ENST00000524033 IGHV4-38-2P0DP08 117 aa5.96□□□□□ -1.46
SPIDR-223ENST00000524033 PRB4P10163 310 aaPredicted RBP5.96□□□□□ -1.46
SPIDR-223ENST00000524033 PF4V1P10720 104 aa5.96□□□□□ -1.46
SPIDR-223ENST00000524033 HLA-DMBP28068 263 aa5.96□□□□□ -1.46
SPIDR-223ENST00000524033 FXYD2P54710 66 aa5.96□□□□□ -1.46
SPIDR-223ENST00000524033 KLRD1Q13241 179 aa5.96□□□□□ -1.46
SPIDR-223ENST00000524033 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.96□□□□□ -1.46
SPIDR-223ENST00000524033 C9orf139Q6ZV77 190 aa5.96□□□□□ -1.46
SPIDR-223ENST00000524033 DYNAPQ8N1N2 210 aa5.96□□□□□ -1.46
SPIDR-223ENST00000524033 Q8N8P6 123 aa5.96□□□□□ -1.46
SPIDR-223ENST00000524033 Q8TAT8 98 aa5.96□□□□□ -1.46
SPIDR-223ENST00000524033 MRPL53Q96EL3 112 aaKnown RBP5.96□□□□□ -1.46
SPIDR-223ENST00000524033 C18orf15Q96N68 181 aa5.96□□□□□ -1.46
SPIDR-223ENST00000524033 TPPP3Q9BW30 176 aa5.96□□□□□ -1.46
SPIDR-223ENST00000524033 MSRB1Q9NZV6 116 aa5.96□□□□□ -1.46
SPIDR-223ENST00000524033 SMPXQ9UHP9 88 aa5.96□□□□□ -1.46
SPIDR-223ENST00000524033 S4R3C0 116 aa5.96□□□□□ -1.46
SPIDR-223ENST00000524033 MGAM2Q2M2H8 2515 aa5.96□□□□□ -1.46
SPIDR-223ENST00000524033 CMYA5Q8N3K9 4069 aa5.95□□□□□ -1.46
SPIDR-223ENST00000524033 IGHV4-4A0A075B6R2 117 aa5.95□□□□□ -1.46
SPIDR-223ENST00000524033 IGHV7-81A0A0B4J1V7 117 aa5.95□□□□□ -1.46
SPIDR-223ENST00000524033 IGHV7-4-1A0A0J9YVY3 117 aa5.95□□□□□ -1.46
SPIDR-223ENST00000524033 TNFRSF6BO95407 300 aa5.95□□□□□ -1.46
SPIDR-223ENST00000524033 CTSGP08311 255 aa5.95□□□□□ -1.46
SPIDR-223ENST00000524033 FXYD7P58549 80 aa5.95□□□□□ -1.46
SPIDR-223ENST00000524033 TAL2Q16559 108 aa5.95□□□□□ -1.46
SPIDR-223ENST00000524033 NRACQ8N912 160 aa5.95□□□□□ -1.46
SPIDR-223ENST00000524033 FAM110DQ8TAY7 271 aaPredicted RBP5.95□□□□□ -1.46
SPIDR-223ENST00000524033 ZNF502Q8TBZ5 544 aa5.95□□□□□ -1.46
SPIDR-223ENST00000524033 CHAC1Q9BUX1 264 aa5.95□□□□□ -1.46
SPIDR-223ENST00000524033 TM2D2Q9BX73 214 aa5.95□□□□□ -1.46
SPIDR-223ENST00000524033 ONECUT1Q9UBC0 465 aa5.95□□□□□ -1.46
SPIDR-223ENST00000524033 SPCS1Q9Y6A9 102 aa5.95□□□□□ -1.46
SPIDR-223ENST00000524033 CLPSL1A2RUU4 121 aa5.94□□□□□ -1.46
SPIDR-223ENST00000524033 FABP5P3A8MUU1 101 aa5.94□□□□□ -1.46
SPIDR-223ENST00000524033 HOXA3O43365 443 aaPredicted RBP5.94□□□□□ -1.46
SPIDR-223ENST00000524033 SCGB2A1O75556 95 aa5.94□□□□□ -1.46
SPIDR-223ENST00000524033 DPM2O94777 84 aa5.94□□□□□ -1.46
SPIDR-223ENST00000524033 IGKCP01834 107 aa5.94□□□□□ -1.46
SPIDR-223ENST00000524033 S100A7P31151 101 aa5.94□□□□□ -1.46
SPIDR-223ENST00000524033 LEPP41159 167 aa5.94□□□□□ -1.46
SPIDR-223ENST00000524033 NMUP48645 174 aa5.94□□□□□ -1.46
SPIDR-223ENST00000524033 RAB9AP51151 201 aa5.94□□□□□ -1.46
SPIDR-223ENST00000524033 TWIST1Q15672 202 aa5.94□□□□□ -1.46
SPIDR-223ENST00000524033 DEFB112Q30KQ8 113 aa5.94□□□□□ -1.46
SPIDR-223ENST00000524033 MINOS1Q5TGZ0 78 aa5.94□□□□□ -1.46
SPIDR-223ENST00000524033 BRD3OSQ6XYD6 125 aa5.94□□□□□ -1.46
SPIDR-223ENST00000524033 C1orf122Q6ZSJ8 110 aa5.94□□□□□ -1.46
SPIDR-223ENST00000524033 Q8N9W7 124 aa5.94□□□□□ -1.46
SPIDR-223ENST00000524033 AP1S3Q96PC3 154 aa5.94□□□□□ -1.46
SPIDR-223ENST00000524033 NAA38Q9BRA0 125 aaKnown RBP5.94□□□□□ -1.46
SPIDR-223ENST00000524033 SLC50A1Q9BRV3 221 aa5.94□□□□□ -1.46
SPIDR-223ENST00000524033 C11orf21Q9P2W6 132 aa5.94□□□□□ -1.46
SPIDR-223ENST00000524033 MINOS1-NBL1R4GNA1 71 aa5.94□□□□□ -1.46
SPIDR-223ENST00000524033 ARHGAP32A7KAX9 2087 aa5.94□□□□□ -1.46
SPIDR-223ENST00000524033 TRBV25-1A0A075B6N4 114 aa5.93□□□□□ -1.46
SPIDR-223ENST00000524033 TRAV8-2A0A0B4J237 113 aa5.93□□□□□ -1.46
SPIDR-223ENST00000524033 TRAV40A0A0B4J280 105 aa5.93□□□□□ -1.46
SPIDR-223ENST00000524033 IGKV3D-20A0A0C4DH25 116 aa5.93□□□□□ -1.46
SPIDR-223ENST00000524033 A0A1B0GWB2 263 aa5.93□□□□□ -1.46
SPIDR-223ENST00000524033 PRAC2D3DTV9 90 aa5.93□□□□□ -1.46
SPIDR-223ENST00000524033 E9PLD3 99 aa5.93□□□□□ -1.46
SPIDR-223ENST00000524033 GATA1P15976 413 aaPredicted RBP5.93□□□□□ -1.46
SPIDR-223ENST00000524033 ERCC8Q13216 396 aa5.93□□□□□ -1.46
SPIDR-223ENST00000524033 Q6YL49 198 aa5.93□□□□□ -1.46
SPIDR-223ENST00000524033 VMO1Q7Z5L0 202 aa5.93□□□□□ -1.46
SPIDR-223ENST00000524033 CEND1Q8N111 149 aa5.93□□□□□ -1.46
SPIDR-223ENST00000524033 TGP01266 2768 aa5.92□□□□□ -1.46
SPIDR-223ENST00000524033 TRBV7-3A0A075B6L6 115 aa5.92□□□□□ -1.46
SPIDR-223ENST00000524033 TRAV12-1A0A0B4J245 112 aa5.92□□□□□ -1.46
SPIDR-223ENST00000524033 CENPVL3A0A0U1RRI6 287 aa5.92□□□□□ -1.46
SPIDR-223ENST00000524033 BUB3O43684 328 aa5.92□□□□□ -1.46
SPIDR-223ENST00000524033 IGHV3-23P01764 117 aa5.92□□□□□ -1.46
SPIDR-223ENST00000524033 TRGV3P03979 118 aa5.92□□□□□ -1.46
SPIDR-223ENST00000524033 SMIM13P0DJ93 91 aa5.92□□□□□ -1.46
SPIDR-223ENST00000524033 FABP2P12104 132 aa5.92□□□□□ -1.46
SPIDR-223ENST00000524033 SLURP1P55000 103 aa5.92□□□□□ -1.46
SPIDR-223ENST00000524033 CCDC144NLQ6NUI1 221 aa5.92□□□□□ -1.46
SPIDR-223ENST00000524033 AJUBAQ96IF1 538 aa5.92□□□□□ -1.46
SPIDR-223ENST00000524033 TTTY13Q9BZ97 58 aa5.92□□□□□ -1.46
SPIDR-223ENST00000524033 SIRPDQ9H106 197 aa5.92□□□□□ -1.46
SPIDR-223ENST00000524033 A0A087WX48 190 aa5.91□□□□□ -1.46
SPIDR-223ENST00000524033 IGHV1-69DA0A0B4J2H0 117 aa5.91□□□□□ -1.46
SPIDR-223ENST00000524033 IGLL5B9A064 214 aa5.91□□□□□ -1.46
SPIDR-223ENST00000524033 TMEM238C9JI98 176 aa5.91□□□□□ -1.46
SPIDR-223ENST00000524033 IGHV1-69P01742 117 aa5.91□□□□□ -1.46
SPIDR-223ENST00000524033 ORM1P02763 201 aa5.91□□□□□ -1.46
SPIDR-223ENST00000524033 TCTAP57738 103 aa5.91□□□□□ -1.46
SPIDR-223ENST00000524033 IGFL4Q6B9Z1 124 aa5.91□□□□□ -1.46
SPIDR-223ENST00000524033 FOXI2Q6ZQN5 318 aa5.91□□□□□ -1.46
SPIDR-223ENST00000524033 C9orf47Q6ZRZ4 202 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms