RNA–Protein interactions for RNA: ENST00000519054.5

SKP1-205, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-205ENST00000519054 CMPK1P30085 196 aa0.54□□□□□ -2.32
SKP1-205ENST00000519054 SULT1A1P50225 295 aa0.54□□□□□ -2.32
SKP1-205ENST00000519054 LSM6P62312 80 aaKnown RBP0.54□□□□□ -2.32
SKP1-205ENST00000519054 RANP62826 216 aaKnown RBP0.54□□□□□ -2.32
SKP1-205ENST00000519054 HBA1P69905 142 aa0.54□□□□□ -2.32
SKP1-205ENST00000519054 KCNJ8Q15842 424 aa0.54□□□□□ -2.32
SKP1-205ENST00000519054 C10orf55Q5SWW7 151 aa0.54□□□□□ -2.32
SKP1-205ENST00000519054 LPCAT3Q6P1A2 487 aa0.54□□□□□ -2.32
SKP1-205ENST00000519054 RPL22L1Q6P5R6 122 aaKnown RBP0.54□□□□□ -2.32
SKP1-205ENST00000519054 ZNF826PQ6ZT77 177 aa0.54□□□□□ -2.32
SKP1-205ENST00000519054 ZNF720Q7Z2F6 126 aa0.54□□□□□ -2.32
SKP1-205ENST00000519054 DCXRQ7Z4W1 244 aa0.54□□□□□ -2.32
SKP1-205ENST00000519054 C20orf196Q8IYI0 205 aa0.54□□□□□ -2.32
SKP1-205ENST00000519054 OR52R1Q8NGF1 315 aa0.54□□□□□ -2.32
SKP1-205ENST00000519054 OR13C4Q8NGS5 318 aa0.54□□□□□ -2.32
SKP1-205ENST00000519054 H1FXQ92522 213 aaKnown RBP0.54□□□□□ -2.32
SKP1-205ENST00000519054 PRAP1Q96NZ9 151 aa0.54□□□□□ -2.32
SKP1-205ENST00000519054 ODF3Q96PU9 254 aa0.54□□□□□ -2.32
SKP1-205ENST00000519054 YIPF3Q9GZM5 350 aa0.54□□□□□ -2.32
SKP1-205ENST00000519054 FAM96AQ9H5X1 160 aa0.54□□□□□ -2.32
SKP1-205ENST00000519054 MED9Q9NWA0 146 aa0.54□□□□□ -2.32
SKP1-205ENST00000519054 VPS29Q9UBQ0 182 aa0.54□□□□□ -2.32
SKP1-205ENST00000519054 HILPDAQ9Y5L2 63 aa0.54□□□□□ -2.32
SKP1-205ENST00000519054 IGKV1D-42A0A075B6H8 117 aa0.53□□□□□ -2.32
SKP1-205ENST00000519054 A0A0D9SG52 128 aa0.53□□□□□ -2.32
SKP1-205ENST00000519054 FAM236DA0A1B0GTK5 79 aa0.53□□□□□ -2.32
SKP1-205ENST00000519054 OR4C46A6NHA9 309 aa0.53□□□□□ -2.32
SKP1-205ENST00000519054 CLDN24A6NM45 220 aa0.53□□□□□ -2.32
SKP1-205ENST00000519054 TTRP02766 147 aa0.53□□□□□ -2.32
SKP1-205ENST00000519054 SERPINE1P05121 402 aa0.53□□□□□ -2.32
SKP1-205ENST00000519054 UBBP0CG47 229 aa0.53□□□□□ -2.32
SKP1-205ENST00000519054 FAM236CP0DP71 79 aa0.53□□□□□ -2.32
SKP1-205ENST00000519054 FKBP2P26885 142 aaKnown RBP0.53□□□□□ -2.32
SKP1-205ENST00000519054 EIF2B2P49770 351 aaKnown RBP0.53□□□□□ -2.32
SKP1-205ENST00000519054 DEFA1P59665 94 aa0.53□□□□□ -2.32
SKP1-205ENST00000519054 PSME3P61289 254 aa0.53□□□□□ -2.32
SKP1-205ENST00000519054 NDUFA5Q16718 116 aa0.53□□□□□ -2.32
SKP1-205ENST00000519054 BRMS1LQ5PSV4 323 aa0.53□□□□□ -2.32
SKP1-205ENST00000519054 CCDC122Q5T0U0 273 aa0.53□□□□□ -2.32
SKP1-205ENST00000519054 Q6Q795 121 aa0.53□□□□□ -2.32
SKP1-205ENST00000519054 CLDN22Q8N7P3 220 aa0.53□□□□□ -2.32
SKP1-205ENST00000519054 C8orf76Q96K31 380 aa0.53□□□□□ -2.32
SKP1-205ENST00000519054 IGKV1-9A0A0C4DH69 117 aa0.52□□□□□ -2.33
SKP1-205ENST00000519054 EXOC1LA0A1B0GW35 172 aa0.52□□□□□ -2.33
SKP1-205ENST00000519054 MRPL33O75394 65 aaKnown RBP0.52□□□□□ -2.33
SKP1-205ENST00000519054 TCRBP04435 133 aa0.52□□□□□ -2.33
SKP1-205ENST00000519054 HTR1AP08908 422 aa0.52□□□□□ -2.33
SKP1-205ENST00000519054 CD79AP11912 226 aa0.52□□□□□ -2.33
SKP1-205ENST00000519054 CDC42P60953 191 aa0.52□□□□□ -2.33
SKP1-205ENST00000519054 SPANXN3Q5MJ09 141 aa0.52□□□□□ -2.33
SKP1-205ENST00000519054 SPINK6Q6UWN8 80 aa0.52□□□□□ -2.33
SKP1-205ENST00000519054 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.52□□□□□ -2.33
SKP1-205ENST00000519054 BPIFA4PQ86YQ2 179 aa0.52□□□□□ -2.33
SKP1-205ENST00000519054 ZNF565Q8N9K5 539 aa0.52□□□□□ -2.33
SKP1-205ENST00000519054 MYOZ3Q8TDC0 251 aa0.52□□□□□ -2.33
SKP1-205ENST00000519054 TOMM6Q96B49 74 aa0.52□□□□□ -2.33
SKP1-205ENST00000519054 KIFC1Q9BW19 673 aa0.52□□□□□ -2.33
SKP1-205ENST00000519054 C20orf27Q9GZN8 174 aa0.52□□□□□ -2.33
SKP1-205ENST00000519054 C22orf24Q9Y442 160 aa0.52□□□□□ -2.33
SKP1-205ENST00000519054 TMEM56-RWDD3S4R434 201 aa0.52□□□□□ -2.33
SKP1-205ENST00000519054 PQLC2LA1A4F0 135 aa0.51□□□□□ -2.33
SKP1-205ENST00000519054 SMIM9A6NGZ8 99 aa0.51□□□□□ -2.33
SKP1-205ENST00000519054 C2orf70A6NJV1 201 aa0.51□□□□□ -2.33
SKP1-205ENST00000519054 OR2T1O43869 369 aa0.51□□□□□ -2.33
SKP1-205ENST00000519054 GYPAP02724 150 aa0.51□□□□□ -2.33
SKP1-205ENST00000519054 RPS17P08708 135 aaKnown RBP0.51□□□□□ -2.33
SKP1-205ENST00000519054 SCTP09683 121 aa0.51□□□□□ -2.33
SKP1-205ENST00000519054 SPI1P17947 270 aa0.51□□□□□ -2.33
SKP1-205ENST00000519054 AESQ08117 197 aa0.51□□□□□ -2.33
SKP1-205ENST00000519054 ESRGQ1W209 222 aa0.51□□□□□ -2.33
SKP1-205ENST00000519054 RGS21Q2M5E4 152 aa0.51□□□□□ -2.33
SKP1-205ENST00000519054 DEFB114Q30KQ6 69 aa0.51□□□□□ -2.33
SKP1-205ENST00000519054 MIR17HGQ75NE6 70 aa0.51□□□□□ -2.33
SKP1-205ENST00000519054 CLVS1Q8IUQ0 354 aaPredicted RBP0.51□□□□□ -2.33
SKP1-205ENST00000519054 ANKRD29Q8N6D5 301 aa0.51□□□□□ -2.33
SKP1-205ENST00000519054 AQP3Q92482 292 aa0.51□□□□□ -2.33
SKP1-205ENST00000519054 DCUN1D1Q96GG9 259 aa0.51□□□□□ -2.33
SKP1-205ENST00000519054 SCGB3A1Q96QR1 104 aa0.51□□□□□ -2.33
SKP1-205ENST00000519054 WFDC6Q9BQY6 131 aa0.51□□□□□ -2.33
SKP1-205ENST00000519054 TMEM147Q9BVK8 224 aa0.51□□□□□ -2.33
SKP1-205ENST00000519054 CKLFQ9UBR5 152 aa0.51□□□□□ -2.33
SKP1-205ENST00000519054 V9GYY5 206 aaPredicted RBP0.51□□□□□ -2.33
SKP1-205ENST00000519054 FADS1O60427 444 aa0.5□□□□□ -2.33
SKP1-205ENST00000519054 ZNF682O95780 498 aa0.5□□□□□ -2.33
SKP1-205ENST00000519054 HAND1O96004 215 aa0.5□□□□□ -2.33
SKP1-205ENST00000519054 ASAH2BP0C7U1 165 aa0.5□□□□□ -2.33
SKP1-205ENST00000519054 MIFP14174 115 aa0.5□□□□□ -2.33
SKP1-205ENST00000519054 DYNLT3P51808 116 aa0.5□□□□□ -2.33
SKP1-205ENST00000519054 PDE6HQ13956 83 aa0.5□□□□□ -2.33
SKP1-205ENST00000519054 IAH1Q2TAA2 248 aaPredicted RBP0.5□□□□□ -2.33
SKP1-205ENST00000519054 LINC01554Q52M75 96 aa0.5□□□□□ -2.33
SKP1-205ENST00000519054 MCFD2Q8NI22 146 aa0.5□□□□□ -2.33
SKP1-205ENST00000519054 MALSU1Q96EH3 234 aa0.5□□□□□ -2.33
SKP1-205ENST00000519054 CCDC42Q96M95 316 aa0.5□□□□□ -2.33
SKP1-205ENST00000519054 RNASE7Q9H1E1 156 aaKnown RBP0.5□□□□□ -2.33
SKP1-205ENST00000519054 DCSTAMPQ9H295 470 aa0.5□□□□□ -2.33
SKP1-205ENST00000519054 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.5□□□□□ -2.33
SKP1-205ENST00000519054 OPTCQ9UBM4 332 aa0.5□□□□□ -2.33
SKP1-205ENST00000519054 TRAV9-1A0A075B6T8 112 aa0.49□□□□□ -2.33
SKP1-205ENST00000519054 hADV38S2A0JD32 116 aa0.49□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms