RNA–Protein interactions for RNA: ENST00000517955.2

ARFGEF1-202, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARFGEF1, Length 1,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-202ENST00000517955 RNF212Q495C1 297 aa8.22□□□□□ -1.09
ARFGEF1-202ENST00000517955 PIK3CD-AS1Q5SR53 167 aa8.22□□□□□ -1.09
ARFGEF1-202ENST00000517955 TSKUQ8WUA8 353 aa8.22□□□□□ -1.09
ARFGEF1-202ENST00000517955 C9orf85Q96MD7 179 aa8.22□□□□□ -1.09
ARFGEF1-202ENST00000517955 SPXQ9BT56 116 aa8.22□□□□□ -1.09
ARFGEF1-202ENST00000517955 C11orf68Q9H3H3 251 aaKnown RBP8.22□□□□□ -1.09
ARFGEF1-202ENST00000517955 NAGKQ9UJ70 344 aa8.22□□□□□ -1.09
ARFGEF1-202ENST00000517955 F2Z2F3 143 aa8.21□□□□□ -1.1
ARFGEF1-202ENST00000517955 SNAI2O43623 268 aa8.21□□□□□ -1.1
ARFGEF1-202ENST00000517955 PRM2P04554 102 aa8.21□□□□□ -1.1
ARFGEF1-202ENST00000517955 RNASE3P12724 160 aaKnown RBP8.21□□□□□ -1.1
ARFGEF1-202ENST00000517955 ASIPP42127 132 aa8.21□□□□□ -1.1
ARFGEF1-202ENST00000517955 ZNF415Q09FC8 603 aa8.21□□□□□ -1.1
ARFGEF1-202ENST00000517955 WDR73Q6P4I2 378 aa8.21□□□□□ -1.1
ARFGEF1-202ENST00000517955 IMMP2LQ96T52 175 aa8.21□□□□□ -1.1
ARFGEF1-202ENST00000517955 NDUFAF3Q9BU61 184 aa8.21□□□□□ -1.1
ARFGEF1-202ENST00000517955 CNFNQ9BYD5 112 aa8.21□□□□□ -1.1
ARFGEF1-202ENST00000517955 MDFICQ9P1T7 246 aa8.21□□□□□ -1.1
ARFGEF1-202ENST00000517955 IGHV4-28A0A0C4DH34 117 aa8.2□□□□□ -1.1
ARFGEF1-202ENST00000517955 SMIM27A0A1W2PRY6 76 aa8.2□□□□□ -1.1
ARFGEF1-202ENST00000517955 C7orf77A4D0Y5 90 aa8.2□□□□□ -1.1
ARFGEF1-202ENST00000517955 ATP6V1G1O75348 118 aa8.2□□□□□ -1.1
ARFGEF1-202ENST00000517955 HTN1P15515 57 aa8.2□□□□□ -1.1
ARFGEF1-202ENST00000517955 LGALS9BQ3B8N2 356 aa8.2□□□□□ -1.1
ARFGEF1-202ENST00000517955 RETNQ9HD89 108 aa8.2□□□□□ -1.1
ARFGEF1-202ENST00000517955 TIMM8BQ9Y5J9 83 aaPredicted RBP8.2□□□□□ -1.1
ARFGEF1-202ENST00000517955 COL7A1Q02388 2944 aa8.2□□□□□ -1.1
ARFGEF1-202ENST00000517955 MUC4Q99102 2169 aa8.2□□□□□ -1.1
ARFGEF1-202ENST00000517955 HUWE1Q7Z6Z7 4374 aaKnown RBP8.19□□□□□ -1.1
ARFGEF1-202ENST00000517955 IGHV4-4A0A075B6R2 117 aa8.19□□□□□ -1.1
ARFGEF1-202ENST00000517955 TMSB15BA0A087X1C1 80 aa8.19□□□□□ -1.1
ARFGEF1-202ENST00000517955 TEX48A0A1B0GUV7 120 aa8.19□□□□□ -1.1
ARFGEF1-202ENST00000517955 LYRM9A8MSI8 78 aa8.19□□□□□ -1.1
ARFGEF1-202ENST00000517955 SNURFLB1AK76 121 aa8.19□□□□□ -1.1
ARFGEF1-202ENST00000517955 SPINK4O60575 86 aa8.19□□□□□ -1.1
ARFGEF1-202ENST00000517955 ARMS2P0C7Q2 107 aa8.19□□□□□ -1.1
ARFGEF1-202ENST00000517955 S100A1P23297 94 aa8.19□□□□□ -1.1
ARFGEF1-202ENST00000517955 S100A4P26447 101 aaKnown RBP8.19□□□□□ -1.1
ARFGEF1-202ENST00000517955 CTRLP40313 264 aa8.19□□□□□ -1.1
ARFGEF1-202ENST00000517955 CDPF1Q6NVV7 123 aa8.19□□□□□ -1.1
ARFGEF1-202ENST00000517955 LINC00612Q8N6U2 182 aa8.19□□□□□ -1.1
ARFGEF1-202ENST00000517955 FER1L6-AS1Q8NA97 138 aa8.19□□□□□ -1.1
ARFGEF1-202ENST00000517955 GTSF1Q8WW33 167 aa8.19□□□□□ -1.1
ARFGEF1-202ENST00000517955 RASL10AQ92737 203 aa8.19□□□□□ -1.1
ARFGEF1-202ENST00000517955 GSN-AS1Q9NRJ2 163 aa8.19□□□□□ -1.1
ARFGEF1-202ENST00000517955 GRIFINA4D1Z8 144 aa8.18□□□□□ -1.1
ARFGEF1-202ENST00000517955 CXorf65A6NEN9 183 aa8.18□□□□□ -1.1
ARFGEF1-202ENST00000517955 M0R2P5 195 aa8.18□□□□□ -1.1
ARFGEF1-202ENST00000517955 NXPH4O95158 308 aa8.18□□□□□ -1.1
ARFGEF1-202ENST00000517955 GZMBP10144 247 aa8.18□□□□□ -1.1
ARFGEF1-202ENST00000517955 C18orf15Q96N68 181 aa8.18□□□□□ -1.1
ARFGEF1-202ENST00000517955 NAT8BQ9UHF3 227 aa8.18□□□□□ -1.1
ARFGEF1-202ENST00000517955 STAB2Q8WWQ8 2551 aa8.18□□□□□ -1.1
ARFGEF1-202ENST00000517955 HIGD1CA8MV81 97 aa8.17□□□□□ -1.1
ARFGEF1-202ENST00000517955 H3BVH4 76 aa8.17□□□□□ -1.1
ARFGEF1-202ENST00000517955 CACNG7P62955 275 aa8.17□□□□□ -1.1
ARFGEF1-202ENST00000517955 DKK2Q9UBU2 259 aa8.17□□□□□ -1.1
ARFGEF1-202ENST00000517955 TRAV9-1A0A075B6T8 112 aa8.16□□□□□ -1.1
ARFGEF1-202ENST00000517955 SPART-AS1P0CW21 52 aa8.16□□□□□ -1.1
ARFGEF1-202ENST00000517955 LYZL1Q6UWQ5 148 aa8.16□□□□□ -1.1
ARFGEF1-202ENST00000517955 ZFP82Q8N141 532 aa8.16□□□□□ -1.1
ARFGEF1-202ENST00000517955 NUP35Q8NFH5 326 aa8.16□□□□□ -1.1
ARFGEF1-202ENST00000517955 NOP10Q9NPE3 64 aaKnown RBP8.16□□□□□ -1.1
ARFGEF1-202ENST00000517955 RPS10P5Q9NQ39 176 aa8.16□□□□□ -1.1
ARFGEF1-202ENST00000517955 PHLDA3Q9Y5J5 127 aa8.16□□□□□ -1.1
ARFGEF1-202ENST00000517955 ATRAIDQ6UW56 229 aa8.15□□□□□ -1.1
ARFGEF1-202ENST00000517955 SYT8Q8NBV8 401 aa8.15□□□□□ -1.1
ARFGEF1-202ENST00000517955 OR10AG1Q8NH19 301 aa8.15□□□□□ -1.1
ARFGEF1-202ENST00000517955 A0A0J9YWU9 116 aa8.14□□□□□ -1.11
ARFGEF1-202ENST00000517955 A0A1B0GUT8 65 aa8.14□□□□□ -1.11
ARFGEF1-202ENST00000517955 A0A1B0GW15 77 aa8.14□□□□□ -1.11
ARFGEF1-202ENST00000517955 CIDEAO60543 219 aa8.14□□□□□ -1.11
ARFGEF1-202ENST00000517955 ZNF876PQ49A33 203 aa8.14□□□□□ -1.11
ARFGEF1-202ENST00000517955 FAM222AQ5U5X8 452 aa8.14□□□□□ -1.11
ARFGEF1-202ENST00000517955 ATP5L2Q7Z4Y8 100 aa8.14□□□□□ -1.11
ARFGEF1-202ENST00000517955 U3KQK5 164 aa8.14□□□□□ -1.11
ARFGEF1-202ENST00000517955 TRGV1A0A0A0MS02 117 aa8.13□□□□□ -1.11
ARFGEF1-202ENST00000517955 A8MWV9 139 aa8.13□□□□□ -1.11
ARFGEF1-202ENST00000517955 DEFB4AO15263 64 aa8.13□□□□□ -1.11
ARFGEF1-202ENST00000517955 NTF3P20783 257 aa8.13□□□□□ -1.11
ARFGEF1-202ENST00000517955 EMP1P54849 157 aa8.13□□□□□ -1.11
ARFGEF1-202ENST00000517955 SPANXN1Q5VSR9 72 aa8.13□□□□□ -1.11
ARFGEF1-202ENST00000517955 KCNIP4Q6PIL6 250 aa8.13□□□□□ -1.11
ARFGEF1-202ENST00000517955 Q6ZTI0 123 aa8.13□□□□□ -1.11
ARFGEF1-202ENST00000517955 BTF3L4Q96K17 158 aa8.13□□□□□ -1.11
ARFGEF1-202ENST00000517955 PGLYRP4Q96LB8 373 aa8.13□□□□□ -1.11
ARFGEF1-202ENST00000517955 KRTAP4-8Q9BYQ9 185 aa8.13□□□□□ -1.11
ARFGEF1-202ENST00000517955 EDA2RQ9HAV5 297 aa8.13□□□□□ -1.11
ARFGEF1-202ENST00000517955 A0A1B0GXF2 115 aa8.12□□□□□ -1.11
ARFGEF1-202ENST00000517955 RS1O15537 224 aa8.12□□□□□ -1.11
ARFGEF1-202ENST00000517955 S100PP25815 95 aa8.12□□□□□ -1.11
ARFGEF1-202ENST00000517955 FAM3BP58499 235 aaPredicted RBP8.12□□□□□ -1.11
ARFGEF1-202ENST00000517955 RIGQ13278 110 aa8.12□□□□□ -1.11
ARFGEF1-202ENST00000517955 RASL11AQ6T310 242 aa8.12□□□□□ -1.11
ARFGEF1-202ENST00000517955 GATD1Q8NB37 220 aa8.12□□□□□ -1.11
ARFGEF1-202ENST00000517955 BORCS7Q96B45 105 aa8.12□□□□□ -1.11
ARFGEF1-202ENST00000517955 TPPP3Q9BW30 176 aa8.12□□□□□ -1.11
ARFGEF1-202ENST00000517955 SMCO4Q9NRQ5 59 aa8.12□□□□□ -1.11
ARFGEF1-202ENST00000517955 CELA1Q9UNI1 258 aa8.12□□□□□ -1.11
ARFGEF1-202ENST00000517955 NACAE9PAV3 2078 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms