RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 ZC2HC1AQ96GY0 325 aa9.66□□□□□ -0.86
PCDHGA6-201ENST00000517434 HS3ST6Q96QI5 342 aa9.66□□□□□ -0.86
PCDHGA6-201ENST00000517434 HIVEP2P31629 2446 aa9.66□□□□□ -0.86
PCDHGA6-201ENST00000517434 IGHV4-30-2A0A087WSY4 118 aa9.66□□□□□ -0.86
PCDHGA6-201ENST00000517434 I3L3M4 83 aa9.66□□□□□ -0.86
PCDHGA6-201ENST00000517434 GRNP28799 593 aaKnown RBP9.66□□□□□ -0.86
PCDHGA6-201ENST00000517434 DUX4L9Q6RFH8 374 aaPredicted RBP9.66□□□□□ -0.86
PCDHGA6-201ENST00000517434 PKIGQ9Y2B9 76 aa9.66□□□□□ -0.86
PCDHGA6-201ENST00000517434 TINCRA0A1B0GVN0 87 aa9.66□□□□□ -0.86
PCDHGA6-201ENST00000517434 FXYD5Q96DB9 178 aa9.66□□□□□ -0.86
PCDHGA6-201ENST00000517434 C22orf46C9J442 243 aa9.65□□□□□ -0.86
PCDHGA6-201ENST00000517434 DEFB130BP0DP73 79 aa9.65□□□□□ -0.86
PCDHGA6-201ENST00000517434 DEFB130AP0DP74 79 aa9.65□□□□□ -0.86
PCDHGA6-201ENST00000517434 FAM120AOSQ5T036 256 aa9.65□□□□□ -0.86
PCDHGA6-201ENST00000517434 Q6ZUT4 128 aa9.65□□□□□ -0.86
PCDHGA6-201ENST00000517434 MALRD1Q5VYJ5 2156 aa9.65□□□□□ -0.86
PCDHGA6-201ENST00000517434 LTAP01374 205 aa9.65□□□□□ -0.86
PCDHGA6-201ENST00000517434 ARFGEF3Q5TH69 2177 aa9.65□□□□□ -0.86
PCDHGA6-201ENST00000517434 F5H768 121 aa9.65□□□□□ -0.87
PCDHGA6-201ENST00000517434 G3V318 75 aa9.64□□□□□ -0.87
PCDHGA6-201ENST00000517434 LOXL1Q08397 574 aaPredicted RBP9.64□□□□□ -0.87
PCDHGA6-201ENST00000517434 DSCR8Q96T75 97 aa9.64□□□□□ -0.87
PCDHGA6-201ENST00000517434 CCL24O00175 119 aa9.64□□□□□ -0.87
PCDHGA6-201ENST00000517434 CRLF1O75462 422 aa9.64□□□□□ -0.87
PCDHGA6-201ENST00000517434 SS18Q15532 418 aa9.64□□□□□ -0.87
PCDHGA6-201ENST00000517434 C2orf16Q68DN1 1984 aa9.64□□□□□ -0.87
PCDHGA6-201ENST00000517434 HOXB4P17483 251 aaPredicted RBP9.64□□□□□ -0.87
PCDHGA6-201ENST00000517434 TRAV26-2A0A0B4J265 109 aa9.64□□□□□ -0.87
PCDHGA6-201ENST00000517434 IGHV4-59P01825 116 aa9.64□□□□□ -0.87
PCDHGA6-201ENST00000517434 WDR86Q86TI4 376 aa9.64□□□□□ -0.87
PCDHGA6-201ENST00000517434 OTOGLQ3ZCN5 2332 aa9.63□□□□□ -0.87
PCDHGA6-201ENST00000517434 TMEM89A2RUT3 159 aa9.63□□□□□ -0.87
PCDHGA6-201ENST00000517434 NDUFV3P56181 108 aaKnown RBP9.63□□□□□ -0.87
PCDHGA6-201ENST00000517434 SHANK1Q9Y566 2161 aa9.63□□□□□ -0.87
PCDHGA6-201ENST00000517434 H3BT86 120 aa9.63□□□□□ -0.87
PCDHGA6-201ENST00000517434 IL17DQ8TAD2 202 aa9.63□□□□□ -0.87
PCDHGA6-201ENST00000517434 ALPK3Q96L96 1907 aa9.63□□□□□ -0.87
PCDHGA6-201ENST00000517434 XCL2Q9UBD3 114 aa9.63□□□□□ -0.87
PCDHGA6-201ENST00000517434 CENPVL3A0A0U1RRI6 287 aa9.62□□□□□ -0.87
PCDHGA6-201ENST00000517434 ZNF503-AS2A6NEH8 195 aa9.62□□□□□ -0.87
PCDHGA6-201ENST00000517434 C15orf65H3BRN8 121 aa9.62□□□□□ -0.87
PCDHGA6-201ENST00000517434 KIF26AQ9ULI4 1882 aaPredicted RBP9.62□□□□□ -0.87
PCDHGA6-201ENST00000517434 WDR87Q6ZQQ6 2873 aa9.62□□□□□ -0.87
PCDHGA6-201ENST00000517434 IGHV7-4-1A0A0J9YVY3 117 aa9.62□□□□□ -0.87
PCDHGA6-201ENST00000517434 F6UB75 175 aa9.62□□□□□ -0.87
PCDHGA6-201ENST00000517434 MYCNOSP40205 109 aa9.62□□□□□ -0.87
PCDHGA6-201ENST00000517434 SUMO4Q6EEV6 95 aa9.62□□□□□ -0.87
PCDHGA6-201ENST00000517434 TRBV10-2A0A0K0K1G8 114 aa9.61□□□□□ -0.87
PCDHGA6-201ENST00000517434 CLPSL1A2RUU4 121 aa9.61□□□□□ -0.87
PCDHGA6-201ENST00000517434 A4D1N5 150 aa9.61□□□□□ -0.87
PCDHGA6-201ENST00000517434 CDK2AP2O75956 126 aa9.61□□□□□ -0.87
PCDHGA6-201ENST00000517434 SPATA12Q7Z6I5 190 aa9.61□□□□□ -0.87
PCDHGA6-201ENST00000517434 ZNF524Q96C55 264 aa9.61□□□□□ -0.87
PCDHGA6-201ENST00000517434 THAP8Q8NA92 274 aa9.61□□□□□ -0.87
PCDHGA6-201ENST00000517434 A0A1W2PNU3 283 aaPredicted RBP9.61□□□□□ -0.87
PCDHGA6-201ENST00000517434 SRSF2Q01130 221 aaKnown RBP9.61□□□□□ -0.87
PCDHGA6-201ENST00000517434 Q8NA96 180 aa9.61□□□□□ -0.87
PCDHGA6-201ENST00000517434 H3BRN7 92 aa9.6□□□□□ -0.87
PCDHGA6-201ENST00000517434 IGLV3-1P01715 115 aa9.6□□□□□ -0.87
PCDHGA6-201ENST00000517434 PFN2P35080 140 aa9.6□□□□□ -0.87
PCDHGA6-201ENST00000517434 ASPHD1Q5U4P2 390 aa9.6□□□□□ -0.87
PCDHGA6-201ENST00000517434 COL4A3Q01955 1670 aa9.6□□□□□ -0.87
PCDHGA6-201ENST00000517434 IGHV1OR15-1A0A075B7D0 117 aa9.6□□□□□ -0.87
PCDHGA6-201ENST00000517434 IGHV3-53P01767 116 aa9.6□□□□□ -0.87
PCDHGA6-201ENST00000517434 PSMB8P28062 276 aa9.6□□□□□ -0.87
PCDHGA6-201ENST00000517434 INSL3P51460 131 aa9.6□□□□□ -0.87
PCDHGA6-201ENST00000517434 MED13LQ71F56 2210 aa9.6□□□□□ -0.87
PCDHGA6-201ENST00000517434 IGKV3D-7A0A0C4DH55 119 aa9.6□□□□□ -0.87
PCDHGA6-201ENST00000517434 MT-ATP8P03928 68 aa9.6□□□□□ -0.87
PCDHGA6-201ENST00000517434 BRK1Q8WUW1 75 aa9.6□□□□□ -0.87
PCDHGA6-201ENST00000517434 UQCRQO14949 82 aa9.59□□□□□ -0.87
PCDHGA6-201ENST00000517434 LINC00643Q86TS7 51 aa9.59□□□□□ -0.87
PCDHGA6-201ENST00000517434 ORMDL1Q9P0S3 153 aa9.59□□□□□ -0.87
PCDHGA6-201ENST00000517434 LHBP01229 141 aa9.59□□□□□ -0.87
PCDHGA6-201ENST00000517434 KIAA1549LQ6ZVL6 1849 aa9.59□□□□□ -0.87
PCDHGA6-201ENST00000517434 ANKHD1Q8IWZ3 2542 aaKnown RBP9.59□□□□□ -0.87
PCDHGA6-201ENST00000517434 RSPO1Q2MKA7 263 aaPredicted RBP9.59□□□□□ -0.87
PCDHGA6-201ENST00000517434 CTSZQ9UBR2 303 aa9.59□□□□□ -0.87
PCDHGA6-201ENST00000517434 ICOSQ9Y6W8 199 aa9.59□□□□□ -0.87
PCDHGA6-201ENST00000517434 IGHG2P01859 326 aa9.58□□□□□ -0.88
PCDHGA6-201ENST00000517434 HERVK_113P63121 156 aa9.58□□□□□ -0.88
PCDHGA6-201ENST00000517434 RHOHQ15669 191 aa9.58□□□□□ -0.88
PCDHGA6-201ENST00000517434 RNF152Q8N8N0 203 aa9.58□□□□□ -0.88
PCDHGA6-201ENST00000517434 CHD9Q3L8U1 2897 aa9.58□□□□□ -0.88
PCDHGA6-201ENST00000517434 C2orf70A6NJV1 201 aa9.58□□□□□ -0.88
PCDHGA6-201ENST00000517434 PTH2Q96A98 100 aa9.58□□□□□ -0.88
PCDHGA6-201ENST00000517434 TTTY13Q9BZ97 58 aa9.58□□□□□ -0.88
PCDHGA6-201ENST00000517434 HOXD3P31249 432 aaPredicted RBP9.58□□□□□ -0.88
PCDHGA6-201ENST00000517434 WT1-ASQ06250 92 aa9.58□□□□□ -0.88
PCDHGA6-201ENST00000517434 SPANXB1Q9NS25 103 aaPredicted RBP9.58□□□□□ -0.88
PCDHGA6-201ENST00000517434 SPG11Q96JI7 2443 aa9.57□□□□□ -0.88
PCDHGA6-201ENST00000517434 hADV29S1A0JD25 119 aa9.57□□□□□ -0.88
PCDHGA6-201ENST00000517434 H0YGX0 51 aa9.57□□□□□ -0.88
PCDHGA6-201ENST00000517434 TRAV25A0A0B4J276 109 aa9.57□□□□□ -0.88
PCDHGA6-201ENST00000517434 A0A0C4DFX4 3053 aa9.56□□□□□ -0.88
PCDHGA6-201ENST00000517434 SPINK13Q1W4C9 94 aa9.56□□□□□ -0.88
PCDHGA6-201ENST00000517434 MUSTN1Q8IVN3 82 aa9.56□□□□□ -0.88
PCDHGA6-201ENST00000517434 CRYGBP07316 175 aa9.56□□□□□ -0.88
PCDHGA6-201ENST00000517434 GP9P14770 177 aa9.56□□□□□ -0.88
PCDHGA6-201ENST00000517434 NPBQ8NG41 125 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms