RNA–Protein interactions for RNA: ENST00000513042.6

ARHGEF28-212, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ARHGEF28, Length 6,273 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-212ENST00000513042 ATP6V0E2Q8NHE4 81 aa13.48□□□□□ -0.25
ARHGEF28-212ENST00000513042 DEFB4AO15263 64 aa13.48□□□□□ -0.25
ARHGEF28-212ENST00000513042 PI4KAP42356 2102 aa13.48□□□□□ -0.25
ARHGEF28-212ENST00000513042 C8orf31Q8N9H6 132 aa13.48□□□□□ -0.25
ARHGEF28-212ENST00000513042 IGHV4OR15-8A0A075B7B6 117 aa13.48□□□□□ -0.25
ARHGEF28-212ENST00000513042 A0A087WW49 117 aa13.48□□□□□ -0.25
ARHGEF28-212ENST00000513042 F8W735 103 aaPredicted RBP13.48□□□□□ -0.25
ARHGEF28-212ENST00000513042 C9orf66Q5T8R8 295 aa13.48□□□□□ -0.25
ARHGEF28-212ENST00000513042 CEP290O15078 2479 aa13.47□□□□□ -0.25
ARHGEF28-212ENST00000513042 A0A0J9YXV3 536 aa13.47□□□□□ -0.25
ARHGEF28-212ENST00000513042 SND1-IT1Q9HBX3 110 aa13.47□□□□□ -0.25
ARHGEF28-212ENST00000513042 IGLL5B9A064 214 aa13.47□□□□□ -0.25
ARHGEF28-212ENST00000513042 DEFB113Q30KQ7 82 aa13.47□□□□□ -0.25
ARHGEF28-212ENST00000513042 CHKB-CPT1BH3BT56 60 aa13.46□□□□□ -0.25
ARHGEF28-212ENST00000513042 COX7A2LO14548 114 aa13.46□□□□□ -0.25
ARHGEF28-212ENST00000513042 B5MCH6 92 aa13.46□□□□□ -0.25
ARHGEF28-212ENST00000513042 PRAC2D3DTV9 90 aa13.46□□□□□ -0.25
ARHGEF28-212ENST00000513042 K7EIM0 57 aa13.46□□□□□ -0.25
ARHGEF28-212ENST00000513042 PRSS47A8MTI9 375 aa13.46□□□□□ -0.26
ARHGEF28-212ENST00000513042 DEFB1P60022 68 aa13.46□□□□□ -0.26
ARHGEF28-212ENST00000513042 CACNA1EQ15878 2313 aa13.46□□□□□ -0.26
ARHGEF28-212ENST00000513042 NLRC5Q86WI3 1866 aa13.45□□□□□ -0.26
ARHGEF28-212ENST00000513042 PATE2Q6UY27 113 aa13.45□□□□□ -0.26
ARHGEF28-212ENST00000513042 IL15RAQ13261 267 aa13.45□□□□□ -0.26
ARHGEF28-212ENST00000513042 TMEM258P61165 79 aa13.45□□□□□ -0.26
ARHGEF28-212ENST00000513042 WFDC9Q8NEX5 89 aa13.45□□□□□ -0.26
ARHGEF28-212ENST00000513042 ANKRD39Q53RE8 183 aa13.44□□□□□ -0.26
ARHGEF28-212ENST00000513042 TDRG1Q3Y452 100 aa13.44□□□□□ -0.26
ARHGEF28-212ENST00000513042 Q8N1Y9 231 aa13.44□□□□□ -0.26
ARHGEF28-212ENST00000513042 A4D1N5 150 aa13.44□□□□□ -0.26
ARHGEF28-212ENST00000513042 FUSP35637 526 aaKnown RBP eCLIP13.44□□□□□ -0.26
ARHGEF28-212ENST00000513042 IGLV11-55A0A075B6I3 123 aa13.43□□□□□ -0.26
ARHGEF28-212ENST00000513042 C16orf54Q6UWD8 224 aa13.43□□□□□ -0.26
ARHGEF28-212ENST00000513042 CTSGP08311 255 aa13.43□□□□□ -0.26
ARHGEF28-212ENST00000513042 SPANXDQ9BXN6 97 aa13.43□□□□□ -0.26
ARHGEF28-212ENST00000513042 TTTY13Q9BZ97 58 aa13.43□□□□□ -0.26
ARHGEF28-212ENST00000513042 RLFQ13129 1914 aa13.43□□□□□ -0.26
ARHGEF28-212ENST00000513042 LYPD6BQ8NI32 183 aa13.43□□□□□ -0.26
ARHGEF28-212ENST00000513042 MRPL23Q16540 153 aaKnown RBP13.42□□□□□ -0.26
ARHGEF28-212ENST00000513042 ARFGEF3Q5TH69 2177 aa13.42□□□□□ -0.26
ARHGEF28-212ENST00000513042 DAZ2Q13117 558 aaKnown RBP13.42□□□□□ -0.26
ARHGEF28-212ENST00000513042 C9orf47Q6ZRZ4 202 aa13.42□□□□□ -0.26
ARHGEF28-212ENST00000513042 DAZ4Q86SG3 579 aaKnown RBP13.42□□□□□ -0.26
ARHGEF28-212ENST00000513042 DAZ3Q9NR90 486 aaKnown RBP13.42□□□□□ -0.26
ARHGEF28-212ENST00000513042 PIP4P1Q86T03 277 aa13.42□□□□□ -0.26
ARHGEF28-212ENST00000513042 CEP250Q9BV73 2442 aa13.42□□□□□ -0.26
ARHGEF28-212ENST00000513042 BAALCQ8WXS3 180 aa13.42□□□□□ -0.26
ARHGEF28-212ENST00000513042 ATP5G1P05496 136 aa13.42□□□□□ -0.26
ARHGEF28-212ENST00000513042 SPART-AS1P0CW21 52 aa13.42□□□□□ -0.26
ARHGEF28-212ENST00000513042 GTSF1Q8WW33 167 aa13.42□□□□□ -0.26
ARHGEF28-212ENST00000513042 DOCK9Q9BZ29 2069 aa13.42□□□□□ -0.26
ARHGEF28-212ENST00000513042 TEX48A0A1B0GUV7 120 aa13.41□□□□□ -0.26
ARHGEF28-212ENST00000513042 C5orf56Q8N8D9 126 aa13.41□□□□□ -0.26
ARHGEF28-212ENST00000513042 LENEPQ9Y5L5 61 aa13.41□□□□□ -0.26
ARHGEF28-212ENST00000513042 DEFB125Q8N687 156 aa13.41□□□□□ -0.26
ARHGEF28-212ENST00000513042 CLEC2BQ92478 149 aa13.41□□□□□ -0.26
ARHGEF28-212ENST00000513042 VSIG2Q96IQ7 327 aa13.41□□□□□ -0.26
ARHGEF28-212ENST00000513042 PLA2G2EQ9NZK7 142 aa13.41□□□□□ -0.26
ARHGEF28-212ENST00000513042 CCL18P55774 89 aa13.4□□□□□ -0.26
ARHGEF28-212ENST00000513042 WFDC11Q8NEX6 87 aa13.4□□□□□ -0.26
ARHGEF28-212ENST00000513042 SLX1AQ9BQ83 275 aa13.4□□□□□ -0.26
ARHGEF28-212ENST00000513042 MRPL36Q9P0J6 103 aaKnown RBP13.4□□□□□ -0.26
ARHGEF28-212ENST00000513042 HHLA3Q9XRX5 114 aa13.4□□□□□ -0.26
ARHGEF28-212ENST00000513042 INTS1Q8N201 2190 aaKnown RBP13.4□□□□□ -0.27
ARHGEF28-212ENST00000513042 UBE2AP49459 152 aa13.39□□□□□ -0.27
ARHGEF28-212ENST00000513042 DOCK8Q8NF50 2099 aa13.39□□□□□ -0.27
ARHGEF28-212ENST00000513042 AKAP6Q13023 2319 aa13.39□□□□□ -0.27
ARHGEF28-212ENST00000513042 HEATR5AQ86XA9 2040 aa13.39□□□□□ -0.27
ARHGEF28-212ENST00000513042 TMEM61Q8N0U2 210 aa13.39□□□□□ -0.27
ARHGEF28-212ENST00000513042 A0A0B4J2C4 111 aa13.39□□□□□ -0.27
ARHGEF28-212ENST00000513042 PROP1O75360 226 aa13.39□□□□□ -0.27
ARHGEF28-212ENST00000513042 FXYD2P54710 66 aa13.39□□□□□ -0.27
ARHGEF28-212ENST00000513042 Q8N9W7 124 aa13.39□□□□□ -0.27
ARHGEF28-212ENST00000513042 IGKV1-17P01599 117 aa13.38□□□□□ -0.27
ARHGEF28-212ENST00000513042 SEM1Q6ZVN7 128 aa13.38□□□□□ -0.27
ARHGEF28-212ENST00000513042 KIR2DL5BA0A0G2JN68 375 aa13.38□□□□□ -0.27
ARHGEF28-212ENST00000513042 KIR2DL5BA0A0G2JPC4 375 aa13.38□□□□□ -0.27
ARHGEF28-212ENST00000513042 WI2-2373I1.2A0A1W2PRP0 233 aa13.38□□□□□ -0.27
ARHGEF28-212ENST00000513042 KIR2DL5AQ8N109 375 aa13.38□□□□□ -0.27
ARHGEF28-212ENST00000513042 POLEQ07864 2286 aa13.38□□□□□ -0.27
ARHGEF28-212ENST00000513042 KRTAP27-1Q3LI81 207 aa13.38□□□□□ -0.27
ARHGEF28-212ENST00000513042 ZDBF2Q9HCK1 2354 aa13.38□□□□□ -0.27
ARHGEF28-212ENST00000513042 LINC01545Q5VT33 79 aa13.37□□□□□ -0.27
ARHGEF28-212ENST00000513042 TOMM6Q96B49 74 aa13.37□□□□□ -0.27
ARHGEF28-212ENST00000513042 A0A1B0GX51 115 aa13.37□□□□□ -0.27
ARHGEF28-212ENST00000513042 C14orf132Q9NPU4 83 aa13.37□□□□□ -0.27
ARHGEF28-212ENST00000513042 C2orf70A6NJV1 201 aa13.37□□□□□ -0.27
ARHGEF28-212ENST00000513042 NCKAP5O14513 1909 aa13.37□□□□□ -0.27
ARHGEF28-212ENST00000513042 DEFB135Q30KP9 77 aa13.37□□□□□ -0.27
ARHGEF28-212ENST00000513042 OPRPNQ99935 248 aaPredicted RBP13.37□□□□□ -0.27
ARHGEF28-212ENST00000513042 ZFP36P26651 326 aaKnown RBP13.37□□□□□ -0.27
ARHGEF28-212ENST00000513042 ACYP1P07311 99 aa13.36□□□□□ -0.27
ARHGEF28-212ENST00000513042 PSMB8P28062 276 aa13.36□□□□□ -0.27
ARHGEF28-212ENST00000513042 NREPQ16612 68 aa13.36□□□□□ -0.27
ARHGEF28-212ENST00000513042 SPATA25Q9BR10 227 aa13.36□□□□□ -0.27
ARHGEF28-212ENST00000513042 Q8NFD4 153 aa13.36□□□□□ -0.27
ARHGEF28-212ENST00000513042 SPTA1P02549 2419 aa13.35□□□□□ -0.27
ARHGEF28-212ENST00000513042 RNF152Q8N8N0 203 aa13.35□□□□□ -0.27
ARHGEF28-212ENST00000513042 TRBV7-3A0A075B6L6 115 aa13.35□□□□□ -0.27
ARHGEF28-212ENST00000513042 FAM236AA0A1B0GUQ0 79 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms