RNA–Protein interactions for RNA: ENST00000512462.5

PRDM16-207, Transcript of PR/SET domain 16, humanhuman

TSL 1 (best)

Gene PRDM16, Length 3,723 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-207ENST00000512462 SYT8Q8NBV8 401 aa9.22□□□□□ -0.93
PRDM16-207ENST00000512462 OR2K2Q8NGT1 345 aa9.22□□□□□ -0.93
PRDM16-207ENST00000512462 RAX2Q96IS3 184 aa9.22□□□□□ -0.93
PRDM16-207ENST00000512462 XCL2Q9UBD3 114 aa9.22□□□□□ -0.93
PRDM16-207ENST00000512462 CHD6Q8TD26 2715 aa9.22□□□□□ -0.93
PRDM16-207ENST00000512462 TMEM8BA6NDV4 472 aa9.21□□□□□ -0.93
PRDM16-207ENST00000512462 NPC2P61916 151 aa9.21□□□□□ -0.93
PRDM16-207ENST00000512462 LINC01356Q8N9X3 169 aa9.21□□□□□ -0.93
PRDM16-207ENST00000512462 HELZ2Q9BYK8 2649 aaKnown RBP9.21□□□□□ -0.93
PRDM16-207ENST00000512462 CCDC140Q96MF4 163 aa9.21□□□□□ -0.93
PRDM16-207ENST00000512462 NXT2Q9NPJ8 142 aaKnown RBP9.21□□□□□ -0.93
PRDM16-207ENST00000512462 LY6G5BQ8NDX9 201 aa9.21□□□□□ -0.94
PRDM16-207ENST00000512462 GEMIN7Q9H840 131 aaKnown RBP9.21□□□□□ -0.94
PRDM16-207ENST00000512462 HERVK_113P61574 105 aa9.2□□□□□ -0.94
PRDM16-207ENST00000512462 CYSLTR1Q9Y271 337 aa9.2□□□□□ -0.94
PRDM16-207ENST00000512462 TAX1BP3O14907 124 aa9.2□□□□□ -0.94
PRDM16-207ENST00000512462 CRYGBP07316 175 aa9.2□□□□□ -0.94
PRDM16-207ENST00000512462 RPL35AP18077 110 aaKnown RBP9.2□□□□□ -0.94
PRDM16-207ENST00000512462 RNASE13Q5GAN3 156 aaKnown RBP9.2□□□□□ -0.94
PRDM16-207ENST00000512462 C10orf105Q8TEF2 133 aa9.2□□□□□ -0.94
PRDM16-207ENST00000512462 ST20Q9HBF5 79 aa9.2□□□□□ -0.94
PRDM16-207ENST00000512462 CRYBG3Q68DQ2 2970 aa9.2□□□□□ -0.94
PRDM16-207ENST00000512462 OVOL1O14753 267 aa9.2□□□□□ -0.94
PRDM16-207ENST00000512462 IGKCP01834 107 aa9.2□□□□□ -0.94
PRDM16-207ENST00000512462 CRIP1P50238 77 aa9.2□□□□□ -0.94
PRDM16-207ENST00000512462 SRSF1Q07955 248 aaKnown RBP eCLIP9.2□□□□□ -0.94
PRDM16-207ENST00000512462 LAGE3Q14657 143 aa9.2□□□□□ -0.94
PRDM16-207ENST00000512462 ZNF876PQ49A33 203 aa9.2□□□□□ -0.94
PRDM16-207ENST00000512462 RPL39LQ96EH5 51 aaKnown RBP9.2□□□□□ -0.94
PRDM16-207ENST00000512462 GFRA4Q9GZZ7 299 aa9.2□□□□□ -0.94
PRDM16-207ENST00000512462 JPT2Q9H910 190 aa9.2□□□□□ -0.94
PRDM16-207ENST00000512462 TEP1Q99973 2627 aaKnown RBP9.2□□□□□ -0.94
PRDM16-207ENST00000512462 ATP5LO75964 103 aa9.19□□□□□ -0.94
PRDM16-207ENST00000512462 CFHR3Q02985 330 aa9.19□□□□□ -0.94
PRDM16-207ENST00000512462 CT83Q5H943 113 aa9.19□□□□□ -0.94
PRDM16-207ENST00000512462 TCTEX1D4Q5JR98 221 aa9.19□□□□□ -0.94
PRDM16-207ENST00000512462 MBD6Q96DN6 1003 aa9.19□□□□□ -0.94
PRDM16-207ENST00000512462 DPM2O94777 84 aa9.19□□□□□ -0.94
PRDM16-207ENST00000512462 PCP2Q8IVA1 136 aa9.19□□□□□ -0.94
PRDM16-207ENST00000512462 TNFRSF18Q9Y5U5 241 aa9.19□□□□□ -0.94
PRDM16-207ENST00000512462 IGSF10Q6WRI0 2623 aa9.19□□□□□ -0.94
PRDM16-207ENST00000512462 IGHV3-38A0A0C4DH36 116 aa9.19□□□□□ -0.94
PRDM16-207ENST00000512462 FAM223BA6NKX1 122 aa9.19□□□□□ -0.94
PRDM16-207ENST00000512462 FAM223AQ8IWN6 122 aa9.19□□□□□ -0.94
PRDM16-207ENST00000512462 SMPXQ9UHP9 88 aa9.19□□□□□ -0.94
PRDM16-207ENST00000512462 ATRQ13535 2644 aa9.18□□□□□ -0.94
PRDM16-207ENST00000512462 ODF3BA8MYP8 253 aa9.18□□□□□ -0.94
PRDM16-207ENST00000512462 LY6LH3BQJ8 138 aa9.18□□□□□ -0.94
PRDM16-207ENST00000512462 FABP2P12104 132 aa9.18□□□□□ -0.94
PRDM16-207ENST00000512462 SLURP1P55000 103 aa9.18□□□□□ -0.94
PRDM16-207ENST00000512462 C11orf71Q6IPW1 123 aa9.18□□□□□ -0.94
PRDM16-207ENST00000512462 USMG5Q96IX5 58 aa9.18□□□□□ -0.94
PRDM16-207ENST00000512462 MS4A6AQ9H2W1 248 aa9.18□□□□□ -0.94
PRDM16-207ENST00000512462 MRPS16Q9Y3D3 137 aaKnown RBP9.18□□□□□ -0.94
PRDM16-207ENST00000512462 KLF12Q9Y4X4 402 aa9.18□□□□□ -0.94
PRDM16-207ENST00000512462 WI2-2373I1.2A0A1W2PRP0 233 aa9.18□□□□□ -0.94
PRDM16-207ENST00000512462 PF4P02776 101 aa9.18□□□□□ -0.94
PRDM16-207ENST00000512462 CTRLP40313 264 aa9.18□□□□□ -0.94
PRDM16-207ENST00000512462 LINC00310P59036 64 aa9.18□□□□□ -0.94
PRDM16-207ENST00000512462 C19orf71A6NCJ1 209 aa9.18□□□□□ -0.94
PRDM16-207ENST00000512462 GAS8-AS1O95177 125 aa9.18□□□□□ -0.94
PRDM16-207ENST00000512462 TNFRSF13BO14836 293 aaPredicted RBP9.17□□□□□ -0.94
PRDM16-207ENST00000512462 EDN2P20800 178 aa9.17□□□□□ -0.94
PRDM16-207ENST00000512462 RRN3P1Q2M238 152 aa9.17□□□□□ -0.94
PRDM16-207ENST00000512462 MLST8Q9BVC4 326 aa9.17□□□□□ -0.94
PRDM16-207ENST00000512462 MRPL35Q9NZE8 188 aaKnown RBP9.17□□□□□ -0.94
PRDM16-207ENST00000512462 HTN3P15516 51 aa9.17□□□□□ -0.94
PRDM16-207ENST00000512462 APRG1Q8IVJ8 170 aa9.17□□□□□ -0.94
PRDM16-207ENST00000512462 ZNF418Q8TF45 676 aaPredicted RBP9.17□□□□□ -0.94
PRDM16-207ENST00000512462 SMG1Q96Q15 3661 aaKnown RBP9.17□□□□□ -0.94
PRDM16-207ENST00000512462 INS-IGF2F8WCM5 200 aa9.17□□□□□ -0.94
PRDM16-207ENST00000512462 ZNF747Q9BV97 191 aa9.17□□□□□ -0.94
PRDM16-207ENST00000512462 DPH3P1Q9H4G8 78 aa9.17□□□□□ -0.94
PRDM16-207ENST00000512462 LGALS3P17931 250 aaKnown RBP9.16□□□□□ -0.94
PRDM16-207ENST00000512462 STHQ8IWL8 128 aa9.16□□□□□ -0.94
PRDM16-207ENST00000512462 SPCS1Q9Y6A9 102 aa9.16□□□□□ -0.94
PRDM16-207ENST00000512462 TRGV2A0A075B6R0 118 aa9.16□□□□□ -0.94
PRDM16-207ENST00000512462 ZNF815PA8K554 130 aa9.16□□□□□ -0.94
PRDM16-207ENST00000512462 AVPP01185 164 aa9.16□□□□□ -0.94
PRDM16-207ENST00000512462 FAM231BA6NCW3 169 aa9.16□□□□□ -0.94
PRDM16-207ENST00000512462 SRSF2Q01130 221 aaKnown RBP9.16□□□□□ -0.94
PRDM16-207ENST00000512462 TOMM7Q9P0U1 55 aa9.16□□□□□ -0.94
PRDM16-207ENST00000512462 TSSC4Q9Y5U2 329 aaPredicted RBP9.16□□□□□ -0.94
PRDM16-207ENST00000512462 ZANQ9Y493 2812 aa9.15□□□□□ -0.94
PRDM16-207ENST00000512462 NDUFA4O00483 81 aa9.15□□□□□ -0.94
PRDM16-207ENST00000512462 CRXO43186 299 aaPredicted RBP9.15□□□□□ -0.94
PRDM16-207ENST00000512462 SMAD5-AS1Q9Y6J3 95 aa9.15□□□□□ -0.94
PRDM16-207ENST00000512462 TRGV1A0A0A0MS02 117 aa9.15□□□□□ -0.94
PRDM16-207ENST00000512462 IGHV7-4-1A0A0J9YVY3 117 aa9.15□□□□□ -0.94
PRDM16-207ENST00000512462 PRM2P04554 102 aa9.15□□□□□ -0.94
PRDM16-207ENST00000512462 SMIM13P0DJ93 91 aa9.15□□□□□ -0.94
PRDM16-207ENST00000512462 HOXD3P31249 432 aaPredicted RBP9.15□□□□□ -0.94
PRDM16-207ENST00000512462 SUMO2P61956 95 aaKnown RBP9.15□□□□□ -0.94
PRDM16-207ENST00000512462 SMIM20Q8N5G0 67 aa9.15□□□□□ -0.94
PRDM16-207ENST00000512462 MRPL16Q9NX20 251 aaKnown RBP9.15□□□□□ -0.94
PRDM16-207ENST00000512462 BSNQ9UPA5 3926 aa9.15□□□□□ -0.95
PRDM16-207ENST00000512462 SLC25A16P16260 332 aa9.15□□□□□ -0.95
PRDM16-207ENST00000512462 GATA3P23771 443 aa9.15□□□□□ -0.95
PRDM16-207ENST00000512462 C2orf66Q6UXQ4 117 aa9.15□□□□□ -0.95
PRDM16-207ENST00000512462 K7ERJ3 54 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms