RNA–Protein interactions for RNA: ENST00000508282.1

DHFR-204, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-204ENST00000508282 PITX3O75364 302 aa1.55□□□□□ -2.16
DHFR-204ENST00000508282 GYPBP06028 91 aa1.55□□□□□ -2.16
DHFR-204ENST00000508282 FGF7P21781 194 aa1.55□□□□□ -2.16
DHFR-204ENST00000508282 CSAG1Q6PB30 78 aa1.55□□□□□ -2.16
DHFR-204ENST00000508282 DEFB119Q8N690 84 aa1.55□□□□□ -2.16
DHFR-204ENST00000508282 LINC00526Q96FQ7 95 aa1.55□□□□□ -2.16
DHFR-204ENST00000508282 OBSCN-AS1Q96MR7 158 aa1.55□□□□□ -2.16
DHFR-204ENST00000508282 SNRNP25Q9BV90 132 aaKnown RBP1.55□□□□□ -2.16
DHFR-204ENST00000508282 GNG8Q9UK08 70 aa1.55□□□□□ -2.16
DHFR-204ENST00000508282 BOKQ9UMX3 212 aaPredicted RBP1.55□□□□□ -2.16
DHFR-204ENST00000508282 MBD5Q9P267 1494 aa1.55□□□□□ -2.16
DHFR-204ENST00000508282 FAM135AQ9P2D6 1515 aa1.55□□□□□ -2.16
DHFR-204ENST00000508282 ATG2AQ2TAZ0 1938 aa1.54□□□□□ -2.16
DHFR-204ENST00000508282 IGLV3-1P01715 115 aa1.54□□□□□ -2.16
DHFR-204ENST00000508282 IGKCP01834 107 aa1.54□□□□□ -2.16
DHFR-204ENST00000508282 S100A1P23297 94 aa1.54□□□□□ -2.16
DHFR-204ENST00000508282 IQCJQ1A5X6 159 aa1.54□□□□□ -2.16
DHFR-204ENST00000508282 SPATA45Q537H7 98 aa1.54□□□□□ -2.16
DHFR-204ENST00000508282 LYPD5Q6UWN5 251 aa1.54□□□□□ -2.16
DHFR-204ENST00000508282 ZGRF1Q86YA3 2104 aa1.54□□□□□ -2.16
DHFR-204ENST00000508282 HMCN1Q96RW7 5635 aa1.53□□□□□ -2.16
DHFR-204ENST00000508282 NUPR2A6NF83 97 aa1.53□□□□□ -2.16
DHFR-204ENST00000508282 MIF4GDA9UHW6 222 aaKnown RBP1.53□□□□□ -2.16
DHFR-204ENST00000508282 CCDC179H3BU77 68 aa1.53□□□□□ -2.16
DHFR-204ENST00000508282 IGHV3-30P01768 117 aa1.53□□□□□ -2.16
DHFR-204ENST00000508282 IL5P05113 134 aa1.53□□□□□ -2.16
DHFR-204ENST00000508282 AKAIN1P0CW23 69 aa1.53□□□□□ -2.16
DHFR-204ENST00000508282 IGHV3-30-5P0DP03 117 aa1.53□□□□□ -2.16
DHFR-204ENST00000508282 PRB4P10163 310 aaPredicted RBP1.53□□□□□ -2.16
DHFR-204ENST00000508282 PDE6GP18545 87 aa1.53□□□□□ -2.16
DHFR-204ENST00000508282 MRPS10P82664 201 aaKnown RBP1.53□□□□□ -2.16
DHFR-204ENST00000508282 SPANXN1Q5VSR9 72 aa1.53□□□□□ -2.16
DHFR-204ENST00000508282 OR2T2Q6IF00 324 aa1.53□□□□□ -2.16
DHFR-204ENST00000508282 SPTSSAQ969W0 71 aa1.53□□□□□ -2.16
DHFR-204ENST00000508282 DMAC1Q96GE9 116 aa1.53□□□□□ -2.16
DHFR-204ENST00000508282 ATG5Q9H1Y0 275 aa1.53□□□□□ -2.16
DHFR-204ENST00000508282 RERGLQ9H628 205 aa1.53□□□□□ -2.16
DHFR-204ENST00000508282 MRPL36Q9P0J6 103 aaKnown RBP1.53□□□□□ -2.16
DHFR-204ENST00000508282 PHRF1Q9P1Y6 1649 aaKnown RBP1.52□□□□□ -2.17
DHFR-204ENST00000508282 CFTRP13569 1480 aa1.52□□□□□ -2.17
DHFR-204ENST00000508282 FBN3Q75N90 2809 aa1.52□□□□□ -2.17
DHFR-204ENST00000508282 TRBV10-1A0A0K0K1A3 114 aa1.52□□□□□ -2.17
DHFR-204ENST00000508282 LOC100130705A0A1B0GUX0 176 aa1.52□□□□□ -2.17
DHFR-204ENST00000508282 F6UZH7 168 aa1.52□□□□□ -2.17
DHFR-204ENST00000508282 PIRTP0C851 137 aa1.52□□□□□ -2.17
DHFR-204ENST00000508282 PIPP12273 146 aaPredicted RBP1.52□□□□□ -2.17
DHFR-204ENST00000508282 HIST1H1DP16402 221 aaKnown RBP1.52□□□□□ -2.17
DHFR-204ENST00000508282 S100PP25815 95 aa1.52□□□□□ -2.17
DHFR-204ENST00000508282 BTG2P78543 158 aa1.52□□□□□ -2.17
DHFR-204ENST00000508282 OCIAD2Q56VL3 154 aa1.52□□□□□ -2.17
DHFR-204ENST00000508282 SEC11CQ9BY50 192 aa1.52□□□□□ -2.17
DHFR-204ENST00000508282 NAA60Q9H7X0 242 aa1.52□□□□□ -2.17
DHFR-204ENST00000508282 TMEM242Q9NWH2 141 aa1.52□□□□□ -2.17
DHFR-204ENST00000508282 SORL1Q92673 2214 aa1.51□□□□□ -2.17
DHFR-204ENST00000508282 SNCGO76070 127 aa1.51□□□□□ -2.17
DHFR-204ENST00000508282 RPL37AP61513 92 aaKnown RBP1.51□□□□□ -2.17
DHFR-204ENST00000508282 C10orf105Q8TEF2 133 aa1.51□□□□□ -2.17
DHFR-204ENST00000508282 PP6455Q8WZ26 134 aa1.51□□□□□ -2.17
DHFR-204ENST00000508282 AGPAT4-IT1Q9H0P7 198 aa1.51□□□□□ -2.17
DHFR-204ENST00000508282 SCN3BQ9NY72 215 aa1.51□□□□□ -2.17
DHFR-204ENST00000508282 NDUFA12Q9UI09 145 aa1.51□□□□□ -2.17
DHFR-204ENST00000508282 C22orf24Q9Y442 160 aa1.51□□□□□ -2.17
DHFR-204ENST00000508282 CTTNBP2Q8WZ74 1663 aa1.51□□□□□ -2.17
DHFR-204ENST00000508282 SNAPC5O75971 98 aa1.5□□□□□ -2.17
DHFR-204ENST00000508282 NDUFB6O95139 128 aa1.5□□□□□ -2.17
DHFR-204ENST00000508282 SLC25A6P12236 298 aa1.5□□□□□ -2.17
DHFR-204ENST00000508282 KRTAP21-3Q3LHN1 58 aa1.5□□□□□ -2.17
DHFR-204ENST00000508282 RPL7L1Q6DKI1 246 aaKnown RBP1.5□□□□□ -2.17
DHFR-204ENST00000508282 ODF3Q96PU9 254 aa1.5□□□□□ -2.17
DHFR-204ENST00000508282 CUL7Q14999 1698 aa1.5□□□□□ -2.17
DHFR-204ENST00000508282 ZNF518AQ6AHZ1 1483 aa1.5□□□□□ -2.17
DHFR-204ENST00000508282 CDK12Q9NYV4 1490 aaPredicted RBP1.5□□□□□ -2.17
DHFR-204ENST00000508282 MED13Q9UHV7 2174 aa1.49□□□□□ -2.17
DHFR-204ENST00000508282 PEAK1Q9H792 1746 aa1.49□□□□□ -2.17
DHFR-204ENST00000508282 E9PCH4 1651 aa1.49□□□□□ -2.17
DHFR-204ENST00000508282 CXorf51AA0A1B0GTR3 108 aa1.49□□□□□ -2.17
DHFR-204ENST00000508282 SPAARA0A1B0GVQ0 90 aa1.49□□□□□ -2.17
DHFR-204ENST00000508282 CORTO00230 105 aa1.49□□□□□ -2.17
DHFR-204ENST00000508282 SLC48A1Q6P1K1 146 aa1.49□□□□□ -2.17
DHFR-204ENST00000508282 TMEM141Q96I45 108 aa1.49□□□□□ -2.17
DHFR-204ENST00000508282 TCEAL7Q9BRU2 100 aa1.49□□□□□ -2.17
DHFR-204ENST00000508282 MRPL35Q9NZE8 188 aaKnown RBP1.49□□□□□ -2.17
DHFR-204ENST00000508282 SERP1Q9Y6X1 66 aa1.49□□□□□ -2.17
DHFR-204ENST00000508282 TET1Q8NFU7 2136 aa1.49□□□□□ -2.17
DHFR-204ENST00000508282 DAPK1P53355 1430 aa1.49□□□□□ -2.17
DHFR-204ENST00000508282 SNRNP200O75643 2136 aaKnown RBP1.48□□□□□ -2.17
DHFR-204ENST00000508282 A6NIN4 97 aa1.48□□□□□ -2.17
DHFR-204ENST00000508282 HIGD1CA8MV81 97 aa1.48□□□□□ -2.17
DHFR-204ENST00000508282 TFF1P04155 84 aa1.48□□□□□ -2.17
DHFR-204ENST00000508282 CCKP06307 115 aa1.48□□□□□ -2.17
DHFR-204ENST00000508282 GNG4P50150 75 aa1.48□□□□□ -2.17
DHFR-204ENST00000508282 Q56UQ5 140 aa1.48□□□□□ -2.17
DHFR-204ENST00000508282 NDUFA11Q86Y39 141 aa1.48□□□□□ -2.17
DHFR-204ENST00000508282 SBSPONQ8IVN8 264 aa1.48□□□□□ -2.17
DHFR-204ENST00000508282 BCORL1Q5H9F3 1711 aa1.48□□□□□ -2.17
DHFR-204ENST00000508282 CACNA1BQ00975 2339 aa1.48□□□□□ -2.17
DHFR-204ENST00000508282 LAMB1P07942 1786 aa1.47□□□□□ -2.17
DHFR-204ENST00000508282 MCRIP1C9JLW8 97 aa1.47□□□□□ -2.17
DHFR-204ENST00000508282 TPPP2P59282 170 aa1.47□□□□□ -2.17
DHFR-204ENST00000508282 FXYD4P59646 89 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms