RNA–Protein interactions for RNA: ENST00000504443.6

COL6A4P2-202, Transcript of collagen type VI alpha 4 pseudogene 2, humanhuman

BASIC

Gene COL6A4P2, Length 2,753 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P2-202ENST00000504443 FOXC1Q12948 553 aa10.85□□□□□ -0.67
COL6A4P2-202ENST00000504443 TOMM6Q96B49 74 aa10.85□□□□□ -0.67
COL6A4P2-202ENST00000504443 TRAV2A0A0B4J234 112 aa10.84□□□□□ -0.67
COL6A4P2-202ENST00000504443 LOC107984640A0A0U1RRK4 108 aa10.84□□□□□ -0.67
COL6A4P2-202ENST00000504443 Q1RN00 199 aa10.84□□□□□ -0.67
COL6A4P2-202ENST00000504443 C21orf62Q9NYP8 219 aa10.84□□□□□ -0.67
COL6A4P2-202ENST00000504443 IGHV1-3A0A0C4DH29 117 aa10.84□□□□□ -0.67
COL6A4P2-202ENST00000504443 COX7A1P24310 79 aa10.84□□□□□ -0.67
COL6A4P2-202ENST00000504443 ZNF56Q15929 161 aa10.84□□□□□ -0.67
COL6A4P2-202ENST00000504443 ATRXP46100 2492 aa10.84□□□□□ -0.67
COL6A4P2-202ENST00000504443 IGHV7-4-1A0A0J9YVY3 117 aa10.83□□□□□ -0.68
COL6A4P2-202ENST00000504443 NDUFB3O43676 98 aa10.83□□□□□ -0.68
COL6A4P2-202ENST00000504443 DUSP14O95147 198 aaKnown RBP10.83□□□□□ -0.68
COL6A4P2-202ENST00000504443 OR10J6PQ8NGY7 276 aa10.83□□□□□ -0.68
COL6A4P2-202ENST00000504443 COL12A1Q99715 3063 aa10.83□□□□□ -0.68
COL6A4P2-202ENST00000504443 TLN1Q9Y490 2541 aaKnown RBP10.83□□□□□ -0.68
COL6A4P2-202ENST00000504443 M0R381 172 aa10.82□□□□□ -0.68
COL6A4P2-202ENST00000504443 CRYGDP07320 174 aa10.82□□□□□ -0.68
COL6A4P2-202ENST00000504443 TMEM170BQ5T4T1 132 aa10.82□□□□□ -0.68
COL6A4P2-202ENST00000504443 DUX3Q96PT4 197 aa10.82□□□□□ -0.68
COL6A4P2-202ENST00000504443 CACNA1BQ00975 2339 aa10.82□□□□□ -0.68
COL6A4P2-202ENST00000504443 LINC00694P0DN24 101 aa10.82□□□□□ -0.68
COL6A4P2-202ENST00000504443 PCNX1Q96RV3 2341 aa10.82□□□□□ -0.68
COL6A4P2-202ENST00000504443 IGHV3-33P01772 117 aa10.82□□□□□ -0.68
COL6A4P2-202ENST00000504443 SUMO2P61956 95 aaKnown RBP10.82□□□□□ -0.68
COL6A4P2-202ENST00000504443 LINC01587Q99440 93 aa10.82□□□□□ -0.68
COL6A4P2-202ENST00000504443 IGHV3-64A0A075B6Q5 118 aa10.81□□□□□ -0.68
COL6A4P2-202ENST00000504443 F8W735 103 aaPredicted RBP10.81□□□□□ -0.68
COL6A4P2-202ENST00000504443 ZNF672Q499Z4 452 aaPredicted RBP10.81□□□□□ -0.68
COL6A4P2-202ENST00000504443 LINC01620Q4KN68 170 aa10.81□□□□□ -0.68
COL6A4P2-202ENST00000504443 ORMDL2Q53FV1 153 aa10.81□□□□□ -0.68
COL6A4P2-202ENST00000504443 Q6Q795 121 aa10.81□□□□□ -0.68
COL6A4P2-202ENST00000504443 IGHV3-49A0A0A0MS15 119 aa10.81□□□□□ -0.68
COL6A4P2-202ENST00000504443 FAM27E3Q08E93 113 aa10.81□□□□□ -0.68
COL6A4P2-202ENST00000504443 MRPL23Q16540 153 aaKnown RBP10.81□□□□□ -0.68
COL6A4P2-202ENST00000504443 SLC25A29Q8N8R3 303 aa10.81□□□□□ -0.68
COL6A4P2-202ENST00000504443 C8orf31Q8N9H6 132 aa10.81□□□□□ -0.68
COL6A4P2-202ENST00000504443 TIMD4Q96H15 378 aa10.81□□□□□ -0.68
COL6A4P2-202ENST00000504443 AGPAT4-IT1Q9H0P7 198 aa10.81□□□□□ -0.68
COL6A4P2-202ENST00000504443 MDFICQ9P1T7 246 aa10.81□□□□□ -0.68
COL6A4P2-202ENST00000504443 DCHS2Q6V1P9 2916 aa10.8□□□□□ -0.68
COL6A4P2-202ENST00000504443 TIMM23O14925 209 aa10.8□□□□□ -0.68
COL6A4P2-202ENST00000504443 MGPP08493 103 aa10.8□□□□□ -0.68
COL6A4P2-202ENST00000504443 FDCSPQ8NFU4 85 aa10.8□□□□□ -0.68
COL6A4P2-202ENST00000504443 PIEZO1Q92508 2521 aa10.8□□□□□ -0.68
COL6A4P2-202ENST00000504443 IGLV4-69A0A075B6H9 119 aa10.8□□□□□ -0.68
COL6A4P2-202ENST00000504443 ARHGAP32A7KAX9 2087 aa10.8□□□□□ -0.68
COL6A4P2-202ENST00000504443 TMEM178BH3BS89 294 aa10.79□□□□□ -0.68
COL6A4P2-202ENST00000504443 MSRB2Q9Y3D2 182 aa10.79□□□□□ -0.68
COL6A4P2-202ENST00000504443 TSHBP01222 138 aa10.79□□□□□ -0.68
COL6A4P2-202ENST00000504443 PRR30Q53SZ7 412 aaPredicted RBP10.79□□□□□ -0.68
COL6A4P2-202ENST00000504443 KLK5Q9Y337 293 aaPredicted RBP10.79□□□□□ -0.68
COL6A4P2-202ENST00000504443 C17orf100A8MU93 164 aa10.78□□□□□ -0.68
COL6A4P2-202ENST00000504443 OOSP1A8MZH6 123 aa10.78□□□□□ -0.68
COL6A4P2-202ENST00000504443 IGLV1-47P01700 117 aa10.78□□□□□ -0.68
COL6A4P2-202ENST00000504443 IGF1P05019 195 aa10.78□□□□□ -0.68
COL6A4P2-202ENST00000504443 RPL39P62891 51 aaKnown RBP10.78□□□□□ -0.68
COL6A4P2-202ENST00000504443 SRSF2Q01130 221 aaKnown RBP10.78□□□□□ -0.68
COL6A4P2-202ENST00000504443 TMEM263Q8WUH6 116 aaKnown RBP10.78□□□□□ -0.68
COL6A4P2-202ENST00000504443 H3BMM0 161 aa10.78□□□□□ -0.68
COL6A4P2-202ENST00000504443 BUB1B-PAK6H3BSN5 160 aa10.78□□□□□ -0.68
COL6A4P2-202ENST00000504443 LGALS9O00182 355 aa10.78□□□□□ -0.68
COL6A4P2-202ENST00000504443 MFAP4P55083 255 aa10.78□□□□□ -0.68
COL6A4P2-202ENST00000504443 CEMP1Q6PRD7 247 aaPredicted RBP10.78□□□□□ -0.68
COL6A4P2-202ENST00000504443 MUSTN1Q8IVN3 82 aa10.78□□□□□ -0.68
COL6A4P2-202ENST00000504443 UBE2WQ96B02 151 aa10.78□□□□□ -0.68
COL6A4P2-202ENST00000504443 CSDC2Q9Y534 153 aaKnown RBP10.78□□□□□ -0.68
COL6A4P2-202ENST00000504443 TMEM190Q8WZ59 177 aa10.77□□□□□ -0.68
COL6A4P2-202ENST00000504443 FANCD2OSQ96PS1 177 aa10.77□□□□□ -0.68
COL6A4P2-202ENST00000504443 LRBAP50851 2863 aa10.77□□□□□ -0.69
COL6A4P2-202ENST00000504443 ZNF22P17026 224 aaPredicted RBP10.77□□□□□ -0.69
COL6A4P2-202ENST00000504443 ATXN8Q156A1 80 aa10.77□□□□□ -0.69
COL6A4P2-202ENST00000504443 C2orf82Q6UX34 121 aa10.77□□□□□ -0.69
COL6A4P2-202ENST00000504443 NBL1P41271 181 aa10.77□□□□□ -0.69
COL6A4P2-202ENST00000504443 HERVK_113P61574 105 aa10.77□□□□□ -0.69
COL6A4P2-202ENST00000504443 ZNRF2Q8NHG8 242 aa10.77□□□□□ -0.69
COL6A4P2-202ENST00000504443 RNF223E7ERA6 249 aa10.76□□□□□ -0.69
COL6A4P2-202ENST00000504443 RAB1BQ9H0U4 201 aa10.76□□□□□ -0.69
COL6A4P2-202ENST00000504443 ADIPOQQ15848 244 aa10.76□□□□□ -0.69
COL6A4P2-202ENST00000504443 Q6ZSV7 163 aa10.76□□□□□ -0.69
COL6A4P2-202ENST00000504443 AMELXQ99217 191 aa10.76□□□□□ -0.69
COL6A4P2-202ENST00000504443 TP53TG1Q9Y2A0 90 aa10.76□□□□□ -0.69
COL6A4P2-202ENST00000504443 FAM236AA0A1B0GUQ0 79 aa10.75□□□□□ -0.69
COL6A4P2-202ENST00000504443 FAM236BA0A1B0GV22 79 aa10.75□□□□□ -0.69
COL6A4P2-202ENST00000504443 J3QQQ9 107 aa10.75□□□□□ -0.69
COL6A4P2-202ENST00000504443 TRIAP1O43715 76 aa10.75□□□□□ -0.69
COL6A4P2-202ENST00000504443 PRR9Q5T870 116 aa10.75□□□□□ -0.69
COL6A4P2-202ENST00000504443 TRGV11A0A075B6L2 103 aa10.75□□□□□ -0.69
COL6A4P2-202ENST00000504443 SLC50A1Q9BRV3 221 aa10.75□□□□□ -0.69
COL6A4P2-202ENST00000504443 ASH1LQ9NR48 2969 aaKnown RBP10.74□□□□□ -0.69
COL6A4P2-202ENST00000504443 TRBV10-2A0A0K0K1G8 114 aa10.74□□□□□ -0.69
COL6A4P2-202ENST00000504443 ADARB2-AS1A8MUL3 147 aa10.74□□□□□ -0.69
COL6A4P2-202ENST00000504443 LGALS3P17931 250 aaKnown RBP10.74□□□□□ -0.69
COL6A4P2-202ENST00000504443 OPRPNQ99935 248 aaPredicted RBP10.74□□□□□ -0.69
COL6A4P2-202ENST00000504443 ZNF580Q9UK33 172 aa10.74□□□□□ -0.69
COL6A4P2-202ENST00000504443 CTSGP08311 255 aa10.74□□□□□ -0.69
COL6A4P2-202ENST00000504443 TMEM126AQ9H061 195 aa10.74□□□□□ -0.69
COL6A4P2-202ENST00000504443 ZFHX3Q15911 3703 aa10.74□□□□□ -0.69
COL6A4P2-202ENST00000504443 PTPRQQ9UMZ3 2332 aa10.74□□□□□ -0.69
COL6A4P2-202ENST00000504443 MBD3L4A6NDZ8 208 aaPredicted RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms