RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 J3QLW9 94 aa1.38□□□□□ -2.19
HMGB3P17-201ENST00000504195 M0R129 80 aa1.38□□□□□ -2.19
HMGB3P17-201ENST00000504195 COX7A2LO14548 114 aa1.38□□□□□ -2.19
HMGB3P17-201ENST00000504195 COX7A2P2O60397 106 aa1.38□□□□□ -2.19
HMGB3P17-201ENST00000504195 ERC2-IT1O76042 136 aa1.38□□□□□ -2.19
HMGB3P17-201ENST00000504195 PPYP01298 95 aa1.38□□□□□ -2.19
HMGB3P17-201ENST00000504195 IGKV1-5P01602 117 aa1.38□□□□□ -2.19
HMGB3P17-201ENST00000504195 ZNF80P51504 273 aaPredicted RBP1.38□□□□□ -2.19
HMGB3P17-201ENST00000504195 EFNA4P52798 201 aa1.38□□□□□ -2.19
HMGB3P17-201ENST00000504195 HERVK_113P61574 105 aa1.38□□□□□ -2.19
HMGB3P17-201ENST00000504195 ATXN8Q156A1 80 aa1.38□□□□□ -2.19
HMGB3P17-201ENST00000504195 ZNF56Q15929 161 aa1.38□□□□□ -2.19
HMGB3P17-201ENST00000504195 MRPL51Q4U2R6 128 aaKnown RBP1.38□□□□□ -2.19
HMGB3P17-201ENST00000504195 C6orf223Q8N319 242 aa1.38□□□□□ -2.19
HMGB3P17-201ENST00000504195 DYNLRB2Q8TF09 96 aa1.38□□□□□ -2.19
HMGB3P17-201ENST00000504195 RMI2Q96E14 147 aa1.38□□□□□ -2.19
HMGB3P17-201ENST00000504195 TIMM21Q9BVV7 248 aa1.38□□□□□ -2.19
HMGB3P17-201ENST00000504195 XAGE1AQ9HD64 81 aa1.38□□□□□ -2.19
HMGB3P17-201ENST00000504195 OSTCQ9NRP0 149 aa1.38□□□□□ -2.19
HMGB3P17-201ENST00000504195 NHP2Q9NX24 153 aaKnown RBP1.38□□□□□ -2.19
HMGB3P17-201ENST00000504195 GNG13Q9P2W3 67 aa1.38□□□□□ -2.19
HMGB3P17-201ENST00000504195 SPRR3Q9UBC9 169 aa1.38□□□□□ -2.19
HMGB3P17-201ENST00000504195 TP73-AS1Q9UF72 201 aa1.38□□□□□ -2.19
HMGB3P17-201ENST00000504195 V9GY05 133 aa1.38□□□□□ -2.19
HMGB3P17-201ENST00000504195 MCM3APO60318 1980 aa1.38□□□□□ -2.19
HMGB3P17-201ENST00000504195 CASP8AP2Q9UKL3 1982 aa1.38□□□□□ -2.19
HMGB3P17-201ENST00000504195 TNS1Q9HBL0 1735 aaKnown RBP1.37□□□□□ -2.19
HMGB3P17-201ENST00000504195 LTBP4Q8N2S1 1624 aa1.37□□□□□ -2.19
HMGB3P17-201ENST00000504195 CITO14578 2027 aa1.37□□□□□ -2.19
HMGB3P17-201ENST00000504195 DOCK3Q8IZD9 2030 aa1.37□□□□□ -2.19
HMGB3P17-201ENST00000504195 MYO18AQ92614 2054 aaKnown RBP1.37□□□□□ -2.19
HMGB3P17-201ENST00000504195 IGKV1D-8A0A087WSZ0 117 aa1.37□□□□□ -2.19
HMGB3P17-201ENST00000504195 IGKV1D-13A0A0B4J2D9 117 aa1.37□□□□□ -2.19
HMGB3P17-201ENST00000504195 IGHV1-69DA0A0B4J2H0 117 aa1.37□□□□□ -2.19
HMGB3P17-201ENST00000504195 IGKV1-9A0A0C4DH69 117 aa1.37□□□□□ -2.19
HMGB3P17-201ENST00000504195 A0A1B0GWA3 101 aa1.37□□□□□ -2.19
HMGB3P17-201ENST00000504195 C19orf71A6NCJ1 209 aa1.37□□□□□ -2.19
HMGB3P17-201ENST00000504195 CRYM-AS1A6NIL9 109 aa1.37□□□□□ -2.19
HMGB3P17-201ENST00000504195 C17orf51A8MQB3 221 aa1.37□□□□□ -2.19
HMGB3P17-201ENST00000504195 CEBPZOSA8MTT3 80 aa1.37□□□□□ -2.19
HMGB3P17-201ENST00000504195 C4orf51C9J302 202 aa1.37□□□□□ -2.19
HMGB3P17-201ENST00000504195 BUB1B-PAK6H3BSN5 160 aa1.37□□□□□ -2.19
HMGB3P17-201ENST00000504195 H7BZZ5 65 aa1.37□□□□□ -2.19
HMGB3P17-201ENST00000504195 HCRTO43612 131 aa1.37□□□□□ -2.19
HMGB3P17-201ENST00000504195 LTAP01374 205 aa1.37□□□□□ -2.19
HMGB3P17-201ENST00000504195 PRM2P04554 102 aa1.37□□□□□ -2.19
HMGB3P17-201ENST00000504195 HMGN2P05204 90 aaKnown RBP1.37□□□□□ -2.19
HMGB3P17-201ENST00000504195 IFI6P09912 130 aa1.37□□□□□ -2.19
HMGB3P17-201ENST00000504195 PIRTP0C851 137 aa1.37□□□□□ -2.19
HMGB3P17-201ENST00000504195 INAFM2P0DMQ5 153 aa1.37□□□□□ -2.19
HMGB3P17-201ENST00000504195 IGKV1-13P0DP09 117 aa1.37□□□□□ -2.19
HMGB3P17-201ENST00000504195 MDKP21741 143 aaPredicted RBP1.37□□□□□ -2.19
HMGB3P17-201ENST00000504195 RNASE4P34096 147 aaKnown RBP1.37□□□□□ -2.19
HMGB3P17-201ENST00000504195 IFI27P40305 119 aaPredicted RBP1.37□□□□□ -2.19
HMGB3P17-201ENST00000504195 RPL27AP46776 148 aaKnown RBP1.37□□□□□ -2.19
HMGB3P17-201ENST00000504195 UBE2D1P51668 147 aa1.37□□□□□ -2.19
HMGB3P17-201ENST00000504195 NCBP2P52298 156 aaKnown RBP eCLIP1.37□□□□□ -2.19
HMGB3P17-201ENST00000504195 FXYD2P54710 66 aa1.37□□□□□ -2.19
HMGB3P17-201ENST00000504195 LINC00313P59037 77 aa1.37□□□□□ -2.19
HMGB3P17-201ENST00000504195 EIF4EBP1Q13541 118 aaPredicted RBP1.37□□□□□ -2.19
HMGB3P17-201ENST00000504195 C6orf99Q4VX62 202 aa1.37□□□□□ -2.19
HMGB3P17-201ENST00000504195 LINC01554Q52M75 96 aa1.37□□□□□ -2.19
HMGB3P17-201ENST00000504195 S100A7L2Q5SY68 101 aa1.37□□□□□ -2.19
HMGB3P17-201ENST00000504195 Q6JHZ5 121 aa1.37□□□□□ -2.19
HMGB3P17-201ENST00000504195 GUSBP11Q6P575 273 aa1.37□□□□□ -2.19
HMGB3P17-201ENST00000504195 SCXQ7RTU7 201 aa1.37□□□□□ -2.19
HMGB3P17-201ENST00000504195 FAM19A3Q7Z5A8 133 aa1.37□□□□□ -2.19
HMGB3P17-201ENST00000504195 VMO1Q7Z5L0 202 aa1.37□□□□□ -2.19
HMGB3P17-201ENST00000504195 LINC00596Q86U02 117 aa1.37□□□□□ -2.19
HMGB3P17-201ENST00000504195 C17orf82Q86X59 251 aaPredicted RBP1.37□□□□□ -2.19
HMGB3P17-201ENST00000504195 CLECL1Q8IZS7 167 aa1.37□□□□□ -2.19
HMGB3P17-201ENST00000504195 LINC00337Q8N6G1 96 aa1.37□□□□□ -2.19
HMGB3P17-201ENST00000504195 FXYD5Q96DB9 178 aa1.37□□□□□ -2.19
HMGB3P17-201ENST00000504195 PGLYRP4Q96LB8 373 aa1.37□□□□□ -2.19
HMGB3P17-201ENST00000504195 Q96M85 177 aa1.37□□□□□ -2.19
HMGB3P17-201ENST00000504195 SLC50A1Q9BRV3 221 aa1.37□□□□□ -2.19
HMGB3P17-201ENST00000504195 CYP4F30PQ9H0H9 118 aa1.37□□□□□ -2.19
HMGB3P17-201ENST00000504195 C11orf1Q9H5F2 150 aa1.37□□□□□ -2.19
HMGB3P17-201ENST00000504195 ZNF702PQ9H963 129 aa1.37□□□□□ -2.19
HMGB3P17-201ENST00000504195 HILPDAQ9Y5L2 63 aa1.37□□□□□ -2.19
HMGB3P17-201ENST00000504195 BCORQ6W2J9 1755 aa1.36□□□□□ -2.19
HMGB3P17-201ENST00000504195 TRBV25-1A0A075B6N4 114 aa1.36□□□□□ -2.19
HMGB3P17-201ENST00000504195 IGHV3OR16-13A0A075B7E8 117 aa1.36□□□□□ -2.19
HMGB3P17-201ENST00000504195 A0A1W2PQD3 144 aa1.36□□□□□ -2.19
HMGB3P17-201ENST00000504195 SMIM27A0A1W2PRY6 76 aa1.36□□□□□ -2.19
HMGB3P17-201ENST00000504195 RBMY1BA6NDE4 496 aaKnown RBP1.36□□□□□ -2.19
HMGB3P17-201ENST00000504195 RBMY1EA6NEQ0 496 aaKnown RBP1.36□□□□□ -2.19
HMGB3P17-201ENST00000504195 K7EQG2 157 aa1.36□□□□□ -2.19
HMGB3P17-201ENST00000504195 MGAMO43451 1857 aa1.36□□□□□ -2.19
HMGB3P17-201ENST00000504195 SH2D1AO60880 128 aa1.36□□□□□ -2.19
HMGB3P17-201ENST00000504195 WISP3O95389 354 aaPredicted RBP1.36□□□□□ -2.19
HMGB3P17-201ENST00000504195 RBMY1DP0C7P1 496 aaKnown RBP1.36□□□□□ -2.19
HMGB3P17-201ENST00000504195 RBMY1A1P0DJD3 496 aaKnown RBP1.36□□□□□ -2.19
HMGB3P17-201ENST00000504195 RBMY1CP0DJD4 496 aa1.36□□□□□ -2.19
HMGB3P17-201ENST00000504195 CD28P10747 220 aa1.36□□□□□ -2.19
HMGB3P17-201ENST00000504195 SLC25A16P16260 332 aa1.36□□□□□ -2.19
HMGB3P17-201ENST00000504195 FUSP35637 526 aaKnown RBP eCLIP1.36□□□□□ -2.19
HMGB3P17-201ENST00000504195 FGF12P61328 243 aa1.36□□□□□ -2.19
HMGB3P17-201ENST00000504195 BLCAPP62952 87 aa1.36□□□□□ -2.19
HMGB3P17-201ENST00000504195 RPS21P63220 83 aaKnown RBP1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms