RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 KIAA1551Q9HCM1 1747 aa0.97□□□□□ -2.25
LMNB1-207ENST00000494185 MYOM2P54296 1465 aa0.97□□□□□ -2.25
LMNB1-207ENST00000494185 PRXQ9BXM0 1461 aa0.97□□□□□ -2.25
LMNB1-207ENST00000494185 NLRP1Q9C000 1473 aa0.97□□□□□ -2.25
LMNB1-207ENST00000494185 ABCC5O15440 1437 aa0.97□□□□□ -2.25
LMNB1-207ENST00000494185 PLXNA3P51805 1871 aa0.97□□□□□ -2.25
LMNB1-207ENST00000494185 NUP210Q8TEM1 1887 aaPredicted RBP0.97□□□□□ -2.25
LMNB1-207ENST00000494185 CDK5RAP2Q96SN8 1893 aa0.97□□□□□ -2.25
LMNB1-207ENST00000494185 MPDZO75970 2070 aa0.96□□□□□ -2.25
LMNB1-207ENST00000494185 MDC1Q14676 2089 aaKnown RBP0.96□□□□□ -2.25
LMNB1-207ENST00000494185 N4BP2Q86UW6 1770 aaPredicted RBP0.96□□□□□ -2.26
LMNB1-207ENST00000494185 PTPRBP23467 1997 aa0.96□□□□□ -2.26
LMNB1-207ENST00000494185 DOCK4Q8N1I0 1966 aa0.96□□□□□ -2.26
LMNB1-207ENST00000494185 TRAV14DV4A0A0A6YYC5 116 aa0.96□□□□□ -2.26
LMNB1-207ENST00000494185 TRBV6-5A0A0K0K1A5 114 aa0.96□□□□□ -2.26
LMNB1-207ENST00000494185 TCRBV4S1A1TA0A5B7 111 aa0.96□□□□□ -2.26
LMNB1-207ENST00000494185 A6NN06 94 aa0.96□□□□□ -2.26
LMNB1-207ENST00000494185 M0R233 179 aa0.96□□□□□ -2.26
LMNB1-207ENST00000494185 GNGT2O14610 69 aa0.96□□□□□ -2.26
LMNB1-207ENST00000494185 LYRM1O43325 122 aa0.96□□□□□ -2.26
LMNB1-207ENST00000494185 CRPP02741 224 aa0.96□□□□□ -2.26
LMNB1-207ENST00000494185 RBP4P02753 201 aa0.96□□□□□ -2.26
LMNB1-207ENST00000494185 RNASE3P12724 160 aaKnown RBP0.96□□□□□ -2.26
LMNB1-207ENST00000494185 CCL4P13236 92 aa0.96□□□□□ -2.26
LMNB1-207ENST00000494185 TPT1P13693 172 aaKnown RBP0.96□□□□□ -2.26
LMNB1-207ENST00000494185 POLR2JP52435 117 aaKnown RBP0.96□□□□□ -2.26
LMNB1-207ENST00000494185 CNBPP62633 177 aaKnown RBP0.96□□□□□ -2.26
LMNB1-207ENST00000494185 DEFB113Q30KQ7 82 aa0.96□□□□□ -2.26
LMNB1-207ENST00000494185 C1orf137Q5JT78 98 aa0.96□□□□□ -2.26
LMNB1-207ENST00000494185 LINC01545Q5VT33 79 aa0.96□□□□□ -2.26
LMNB1-207ENST00000494185 LYPD5Q6UWN5 251 aa0.96□□□□□ -2.26
LMNB1-207ENST00000494185 SBSPONQ8IVN8 264 aa0.96□□□□□ -2.26
LMNB1-207ENST00000494185 Q8N814 137 aa0.96□□□□□ -2.26
LMNB1-207ENST00000494185 CCL4L1Q8NHW4 92 aa0.96□□□□□ -2.26
LMNB1-207ENST00000494185 TMEM254Q8TBM7 123 aa0.96□□□□□ -2.26
LMNB1-207ENST00000494185 C18orf32Q8TCD1 76 aa0.96□□□□□ -2.26
LMNB1-207ENST00000494185 AQP10Q96PS8 301 aa0.96□□□□□ -2.26
LMNB1-207ENST00000494185 ST20Q9HBF5 79 aa0.96□□□□□ -2.26
LMNB1-207ENST00000494185 LINC00474Q9P2X8 69 aa0.96□□□□□ -2.26
LMNB1-207ENST00000494185 TPRKBQ9Y3C4 175 aa0.96□□□□□ -2.26
LMNB1-207ENST00000494185 ANKRD31Q8N7Z5 1873 aa0.96□□□□□ -2.26
LMNB1-207ENST00000494185 MED13Q9UHV7 2174 aa0.96□□□□□ -2.26
LMNB1-207ENST00000494185 STRCP1A6NGW2 1772 aa0.96□□□□□ -2.26
LMNB1-207ENST00000494185 EIF4G3O43432 1585 aaKnown RBP0.96□□□□□ -2.26
LMNB1-207ENST00000494185 ADAMTS12P58397 1594 aa0.96□□□□□ -2.26
LMNB1-207ENST00000494185 PCNX2A6NKB5 2137 aa0.95□□□□□ -2.26
LMNB1-207ENST00000494185 MYH7BA7E2Y1 1941 aa0.95□□□□□ -2.26
LMNB1-207ENST00000494185 NCKAP5O14513 1909 aa0.95□□□□□ -2.26
LMNB1-207ENST00000494185 POLEQ07864 2286 aa0.95□□□□□ -2.26
LMNB1-207ENST00000494185 CCDC88AQ3V6T2 1871 aa0.95□□□□□ -2.26
LMNB1-207ENST00000494185 PIK3C2AO00443 1686 aa0.95□□□□□ -2.26
LMNB1-207ENST00000494185 DIDO1Q9BTC0 2240 aaKnown RBP0.95□□□□□ -2.26
LMNB1-207ENST00000494185 TRGV2A0A075B6R0 118 aa0.95□□□□□ -2.26
LMNB1-207ENST00000494185 TRBV7-7A0A0K0K1E9 115 aa0.95□□□□□ -2.26
LMNB1-207ENST00000494185 A0A1W2PPM0 123 aa0.95□□□□□ -2.26
LMNB1-207ENST00000494185 hADV29S1A0JD25 119 aa0.95□□□□□ -2.26
LMNB1-207ENST00000494185 B4DSR2 109 aa0.95□□□□□ -2.26
LMNB1-207ENST00000494185 NUPR1O60356 82 aa0.95□□□□□ -2.26
LMNB1-207ENST00000494185 GYPBP06028 91 aa0.95□□□□□ -2.26
LMNB1-207ENST00000494185 ASIPP42127 132 aa0.95□□□□□ -2.26
LMNB1-207ENST00000494185 GNG11P61952 73 aa0.95□□□□□ -2.26
LMNB1-207ENST00000494185 BLCAPP62952 87 aa0.95□□□□□ -2.26
LMNB1-207ENST00000494185 HMGN3Q15651 99 aa0.95□□□□□ -2.26
LMNB1-207ENST00000494185 ETDBQ3ZM63 59 aa0.95□□□□□ -2.26
LMNB1-207ENST00000494185 C10orf55Q5SWW7 151 aa0.95□□□□□ -2.26
LMNB1-207ENST00000494185 C1orf134Q5TEV5 83 aa0.95□□□□□ -2.26
LMNB1-207ENST00000494185 XAF1Q6GPH4 301 aa0.95□□□□□ -2.26
LMNB1-207ENST00000494185 KRTAP26-1Q6PEX3 210 aa0.95□□□□□ -2.26
LMNB1-207ENST00000494185 C2orf82Q6UX34 121 aa0.95□□□□□ -2.26
LMNB1-207ENST00000494185 Q8N8P6 123 aa0.95□□□□□ -2.26
LMNB1-207ENST00000494185 OR10AG1Q8NH19 301 aa0.95□□□□□ -2.26
LMNB1-207ENST00000494185 POP5Q969H6 163 aaKnown RBP0.95□□□□□ -2.26
LMNB1-207ENST00000494185 ODF3Q96PU9 254 aa0.95□□□□□ -2.26
LMNB1-207ENST00000494185 NABP2Q9BQ15 211 aa0.95□□□□□ -2.26
LMNB1-207ENST00000494185 HIGD1BQ9P298 99 aa0.95□□□□□ -2.26
LMNB1-207ENST00000494185 NOP16Q9Y3C1 178 aaKnown RBP0.95□□□□□ -2.26
LMNB1-207ENST00000494185 SPCS1Q9Y6A9 102 aa0.95□□□□□ -2.26
LMNB1-207ENST00000494185 MYH9P35579 1960 aaKnown RBP0.95□□□□□ -2.26
LMNB1-207ENST00000494185 HFM1A2PYH4 1435 aa0.95□□□□□ -2.26
LMNB1-207ENST00000494185 KDM6AO15550 1401 aaPredicted RBP0.95□□□□□ -2.26
LMNB1-207ENST00000494185 DAPK1P53355 1430 aa0.95□□□□□ -2.26
LMNB1-207ENST00000494185 AKAP12Q02952 1782 aa0.95□□□□□ -2.26
LMNB1-207ENST00000494185 BAHCC1Q9P281 2608 aa0.95□□□□□ -2.26
LMNB1-207ENST00000494185 FANCD2Q9BXW9 1451 aa0.94□□□□□ -2.26
LMNB1-207ENST00000494185 NUMA1Q14980 2115 aa0.94□□□□□ -2.26
LMNB1-207ENST00000494185 TMEM131LA2VDJ0 1609 aa0.94□□□□□ -2.26
LMNB1-207ENST00000494185 MYH7P12883 1935 aa0.94□□□□□ -2.26
LMNB1-207ENST00000494185 IGKV2D-26A0A0A0MRZ7 120 aa0.94□□□□□ -2.26
LMNB1-207ENST00000494185 TRAV10A0A0B4J240 114 aa0.94□□□□□ -2.26
LMNB1-207ENST00000494185 hDV103S1A0JD37 113 aa0.94□□□□□ -2.26
LMNB1-207ENST00000494185 FAM24AA6NFZ4 105 aa0.94□□□□□ -2.26
LMNB1-207ENST00000494185 SYS1-DBNDD2H3BUS1 97 aa0.94□□□□□ -2.26
LMNB1-207ENST00000494185 H3BUT2 72 aa0.94□□□□□ -2.26
LMNB1-207ENST00000494185 SNCGO76070 127 aa0.94□□□□□ -2.26
LMNB1-207ENST00000494185 IGKCP01834 107 aa0.94□□□□□ -2.26
LMNB1-207ENST00000494185 GYPAP02724 150 aa0.94□□□□□ -2.26
LMNB1-207ENST00000494185 IL5P05113 134 aa0.94□□□□□ -2.26
LMNB1-207ENST00000494185 CCKP06307 115 aa0.94□□□□□ -2.26
LMNB1-207ENST00000494185 FAUP35544 74 aaKnown RBP0.94□□□□□ -2.26
LMNB1-207ENST00000494185 SEC11AP67812 179 aa0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms