RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 COA4Q9NYJ1 87 aa0.36□□□□□ -2.35
HMGB1P30-201ENST00000492455 LSM2Q9Y333 95 aaKnown RBP0.36□□□□□ -2.35
HMGB1P30-201ENST00000492455 HELZP42694 1942 aaKnown RBP0.36□□□□□ -2.35
HMGB1P30-201ENST00000492455 UHRF1BP1LA0JNW5 1464 aa0.35□□□□□ -2.35
HMGB1P30-201ENST00000492455 ARHGEF10O15013 1369 aa0.35□□□□□ -2.35
HMGB1P30-201ENST00000492455 M0R2P5 195 aa0.35□□□□□ -2.35
HMGB1P30-201ENST00000492455 KRTAP2-3P0C7H8 128 aa0.35□□□□□ -2.35
HMGB1P30-201ENST00000492455 CKS1BP61024 79 aa0.35□□□□□ -2.35
HMGB1P30-201ENST00000492455 CTAGE3PQ8IX95 158 aa0.35□□□□□ -2.35
HMGB1P30-201ENST00000492455 DYNLRB2Q8TF09 96 aa0.35□□□□□ -2.35
HMGB1P30-201ENST00000492455 KRTAP2-4Q9BYR9 128 aa0.35□□□□□ -2.35
HMGB1P30-201ENST00000492455 KRTAP2-1Q9BYU5 128 aa0.35□□□□□ -2.35
HMGB1P30-201ENST00000492455 PLAC8Q9NZF1 115 aa0.35□□□□□ -2.35
HMGB1P30-201ENST00000492455 NOP16Q9Y3C1 178 aaKnown RBP0.35□□□□□ -2.35
HMGB1P30-201ENST00000492455 LRP5O75197 1615 aa0.35□□□□□ -2.35
HMGB1P30-201ENST00000492455 MDN1Q9NU22 5596 aa0.34□□□□□ -2.35
HMGB1P30-201ENST00000492455 A0A096LNT2 108 aa0.34□□□□□ -2.36
HMGB1P30-201ENST00000492455 TEX49A0A1B0GTD5 131 aa0.34□□□□□ -2.36
HMGB1P30-201ENST00000492455 A6NIN4 97 aa0.34□□□□□ -2.36
HMGB1P30-201ENST00000492455 MCRIP1C9JLW8 97 aa0.34□□□□□ -2.36
HMGB1P30-201ENST00000492455 F2Z2F3 143 aa0.34□□□□□ -2.36
HMGB1P30-201ENST00000492455 YPEL1O60688 119 aa0.34□□□□□ -2.36
HMGB1P30-201ENST00000492455 IGLC6P0CF74 106 aa0.34□□□□□ -2.36
HMGB1P30-201ENST00000492455 SMIM6P0DI80 62 aa0.34□□□□□ -2.36
HMGB1P30-201ENST00000492455 SLC25A6P12236 298 aa0.34□□□□□ -2.36
HMGB1P30-201ENST00000492455 SPINK6Q6UWN8 80 aa0.34□□□□□ -2.36
HMGB1P30-201ENST00000492455 MMGT1Q8N4V1 131 aa0.34□□□□□ -2.36
HMGB1P30-201ENST00000492455 SMR3AQ99954 134 aa0.34□□□□□ -2.36
HMGB1P30-201ENST00000492455 TMEM14BQ9NUH8 114 aa0.34□□□□□ -2.36
HMGB1P30-201ENST00000492455 GSKIPQ9P0R6 139 aa0.34□□□□□ -2.36
HMGB1P30-201ENST00000492455 JMJD1CQ15652 2540 aa0.34□□□□□ -2.36
HMGB1P30-201ENST00000492455 KIAA0100Q14667 2235 aaKnown RBP0.34□□□□□ -2.36
HMGB1P30-201ENST00000492455 ATG2AQ2TAZ0 1938 aa0.34□□□□□ -2.36
HMGB1P30-201ENST00000492455 CDK12Q9NYV4 1490 aaPredicted RBP0.34□□□□□ -2.36
HMGB1P30-201ENST00000492455 CCDC171Q6TFL3 1326 aa0.34□□□□□ -2.36
HMGB1P30-201ENST00000492455 MED13LQ71F56 2210 aa0.33□□□□□ -2.36
HMGB1P30-201ENST00000492455 BLMP54132 1417 aaPredicted RBP0.33□□□□□ -2.36
HMGB1P30-201ENST00000492455 TRBV20-1A0A075B6N2 111 aa0.33□□□□□ -2.36
HMGB1P30-201ENST00000492455 SPINK1P00995 79 aa0.33□□□□□ -2.36
HMGB1P30-201ENST00000492455 NCS1P62166 190 aa0.33□□□□□ -2.36
HMGB1P30-201ENST00000492455 RPL7L1Q6DKI1 246 aaKnown RBP0.33□□□□□ -2.36
HMGB1P30-201ENST00000492455 OR2T2Q6IF00 324 aa0.33□□□□□ -2.36
HMGB1P30-201ENST00000492455 FAM213BQ8TBF2 198 aa0.33□□□□□ -2.36
HMGB1P30-201ENST00000492455 SYNJ1O43426 1573 aa0.32□□□□□ -2.36
HMGB1P30-201ENST00000492455 LOC285556D6RIA3 1793 aa0.32□□□□□ -2.36
HMGB1P30-201ENST00000492455 KMT2DO14686 5537 aa0.32□□□□□ -2.36
HMGB1P30-201ENST00000492455 MACF1Q9UPN3 7388 aaKnown RBP0.32□□□□□ -2.36
HMGB1P30-201ENST00000492455 PIGBOS1A0A0B4J2F0 54 aa0.32□□□□□ -2.36
HMGB1P30-201ENST00000492455 FAM236AA0A1B0GUQ0 79 aa0.32□□□□□ -2.36
HMGB1P30-201ENST00000492455 FAM236BA0A1B0GV22 79 aa0.32□□□□□ -2.36
HMGB1P30-201ENST00000492455 J3QLW9 94 aa0.32□□□□□ -2.36
HMGB1P30-201ENST00000492455 J3QR89 54 aa0.32□□□□□ -2.36
HMGB1P30-201ENST00000492455 TSPAN19P0C672 248 aa0.32□□□□□ -2.36
HMGB1P30-201ENST00000492455 MPC1LP0DKB6 136 aa0.32□□□□□ -2.36
HMGB1P30-201ENST00000492455 LINC00694P0DN24 101 aa0.32□□□□□ -2.36
HMGB1P30-201ENST00000492455 PYYP10082 97 aa0.32□□□□□ -2.36
HMGB1P30-201ENST00000492455 IFITM1P13164 125 aa0.32□□□□□ -2.36
HMGB1P30-201ENST00000492455 NDUFA11Q86Y39 141 aa0.32□□□□□ -2.36
HMGB1P30-201ENST00000492455 LZICQ8WZA0 190 aa0.32□□□□□ -2.36
HMGB1P30-201ENST00000492455 DSCR8Q96T75 97 aa0.32□□□□□ -2.36
HMGB1P30-201ENST00000492455 PRR15LQ9BU68 103 aa0.32□□□□□ -2.36
HMGB1P30-201ENST00000492455 SMIM3Q9BZL3 60 aa0.32□□□□□ -2.36
HMGB1P30-201ENST00000492455 SYNE2Q8WXH0 6885 aaKnown RBP0.32□□□□□ -2.36
HMGB1P30-201ENST00000492455 KDM5CP41229 1560 aa0.32□□□□□ -2.36
HMGB1P30-201ENST00000492455 MYO7AQ13402 2215 aa0.32□□□□□ -2.36
HMGB1P30-201ENST00000492455 NAV2Q8IVL1 2488 aa0.31□□□□□ -2.36
HMGB1P30-201ENST00000492455 OVOS2A0A0J9YW53 1432 aa0.31□□□□□ -2.36
HMGB1P30-201ENST00000492455 OVOS2Q6IE36 1432 aa0.31□□□□□ -2.36
HMGB1P30-201ENST00000492455 FSIP2Q5CZC0 6907 aa0.31□□□□□ -2.36
HMGB1P30-201ENST00000492455 TCRBV3S1A0A5B6 114 aa0.31□□□□□ -2.36
HMGB1P30-201ENST00000492455 PHGR1C9JFL3 82 aa0.31□□□□□ -2.36
HMGB1P30-201ENST00000492455 ZNF670-ZNF695F2Z2N8 137 aa0.31□□□□□ -2.36
HMGB1P30-201ENST00000492455 ELOF1P60002 83 aaKnown RBP0.31□□□□□ -2.36
HMGB1P30-201ENST00000492455 EMX2Q04743 252 aa0.31□□□□□ -2.36
HMGB1P30-201ENST00000492455 FAM74A4Q5TZK3 123 aa0.31□□□□□ -2.36
HMGB1P30-201ENST00000492455 MAFIPQ8WZ33 124 aa0.31□□□□□ -2.36
HMGB1P30-201ENST00000492455 IFI27L1Q96BM0 104 aa0.31□□□□□ -2.36
HMGB1P30-201ENST00000492455 TMEM141Q96I45 108 aa0.31□□□□□ -2.36
HMGB1P30-201ENST00000492455 BET1LQ9NYM9 111 aa0.31□□□□□ -2.36
HMGB1P30-201ENST00000492455 SCP2D1Q9UJQ7 156 aa0.31□□□□□ -2.36
HMGB1P30-201ENST00000492455 ERG28Q9UKR5 140 aa0.31□□□□□ -2.36
HMGB1P30-201ENST00000492455 CACNA1HO95180 2353 aa0.31□□□□□ -2.36
HMGB1P30-201ENST00000492455 DISP2A7MBM2 1401 aa0.3□□□□□ -2.36
HMGB1P30-201ENST00000492455 UNC13AQ9UPW8 1703 aa0.3□□□□□ -2.36
HMGB1P30-201ENST00000492455 DLEC1Q9Y238 1755 aa0.3□□□□□ -2.36
HMGB1P30-201ENST00000492455 AFDNP55196 1824 aaKnown RBP0.3□□□□□ -2.36
HMGB1P30-201ENST00000492455 RBAKDNA6NC62 111 aa0.3□□□□□ -2.36
HMGB1P30-201ENST00000492455 CCDC179H3BU77 68 aa0.3□□□□□ -2.36
HMGB1P30-201ENST00000492455 M0R2Z0 102 aa0.3□□□□□ -2.36
HMGB1P30-201ENST00000492455 S100A3P33764 101 aa0.3□□□□□ -2.36
HMGB1P30-201ENST00000492455 COX6A2Q02221 97 aa0.3□□□□□ -2.36
HMGB1P30-201ENST00000492455 LINC01545Q5VT33 79 aa0.3□□□□□ -2.36
HMGB1P30-201ENST00000492455 SAR1AQ9NR31 198 aa0.3□□□□□ -2.36
HMGB1P30-201ENST00000492455 TPRP12270 2363 aaKnown RBP0.3□□□□□ -2.36
HMGB1P30-201ENST00000492455 CASZ1Q86V15 1759 aa0.29□□□□□ -2.36
HMGB1P30-201ENST00000492455 ERCC6Q03468 1493 aa0.29□□□□□ -2.36
HMGB1P30-201ENST00000492455 TNCP24821 2201 aa0.29□□□□□ -2.36
HMGB1P30-201ENST00000492455 TRAV12-2A0A075B6T6 113 aa0.29□□□□□ -2.36
HMGB1P30-201ENST00000492455 PITX3O75364 302 aa0.29□□□□□ -2.36
HMGB1P30-201ENST00000492455 NCR2O95944 276 aa0.29□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms