RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 FABP5P3A8MUU1 101 aa10.37□□□□□ -0.75
USP39-217ENST00000491659 DPPA3Q6W0C5 159 aa10.37□□□□□ -0.75
USP39-217ENST00000491659 SFT2D1Q8WV19 159 aa10.37□□□□□ -0.75
USP39-217ENST00000491659 CIDEAO60543 219 aa10.36□□□□□ -0.75
USP39-217ENST00000491659 BTF3P20290 206 aaKnown RBP10.36□□□□□ -0.75
USP39-217ENST00000491659 S100A4P26447 101 aaKnown RBP10.36□□□□□ -0.75
USP39-217ENST00000491659 AKR1C3P42330 323 aa10.36□□□□□ -0.75
USP39-217ENST00000491659 TNP2Q05952 138 aa10.36□□□□□ -0.75
USP39-217ENST00000491659 LYPD5Q6UWN5 251 aa10.36□□□□□ -0.75
USP39-217ENST00000491659 ZFP30Q9Y2G7 519 aa10.36□□□□□ -0.75
USP39-217ENST00000491659 PKD1P98161 4303 aa10.36□□□□□ -0.75
USP39-217ENST00000491659 A0A1B0GV50 99 aa10.35□□□□□ -0.75
USP39-217ENST00000491659 RS1O15537 224 aa10.35□□□□□ -0.75
USP39-217ENST00000491659 RNASE3P12724 160 aaKnown RBP10.35□□□□□ -0.75
USP39-217ENST00000491659 GATA1P15976 413 aaPredicted RBP10.35□□□□□ -0.75
USP39-217ENST00000491659 ASIPP42127 132 aa10.35□□□□□ -0.75
USP39-217ENST00000491659 ZNF506Q5JVG8 444 aa10.35□□□□□ -0.75
USP39-217ENST00000491659 CFAP126Q5VTH2 177 aa10.35□□□□□ -0.75
USP39-217ENST00000491659 MBD3L1Q8WWY6 194 aa10.35□□□□□ -0.75
USP39-217ENST00000491659 ZC2HC1AQ96GY0 325 aa10.35□□□□□ -0.75
USP39-217ENST00000491659 MED9Q9NWA0 146 aa10.35□□□□□ -0.75
USP39-217ENST00000491659 IGKV3D-20A0A0C4DH25 116 aa10.34□□□□□ -0.75
USP39-217ENST00000491659 TRBV6-1A0A0K0K1D8 114 aa10.34□□□□□ -0.75
USP39-217ENST00000491659 B4DEV8 164 aa10.34□□□□□ -0.75
USP39-217ENST00000491659 PAGE4O60829 102 aa10.34□□□□□ -0.75
USP39-217ENST00000491659 SH2D6Q7Z4S9 175 aa10.34□□□□□ -0.75
USP39-217ENST00000491659 COMMD7Q86VX2 200 aa10.34□□□□□ -0.75
USP39-217ENST00000491659 NHLRC2Q8NBF2 726 aa10.34□□□□□ -0.75
USP39-217ENST00000491659 PTH2Q96A98 100 aa10.34□□□□□ -0.75
USP39-217ENST00000491659 PGPEP1LA6NFU8 196 aa10.33□□□□□ -0.76
USP39-217ENST00000491659 SH2D1AO60880 128 aa10.33□□□□□ -0.76
USP39-217ENST00000491659 H2AFB1P0C5Y9 115 aa10.33□□□□□ -0.76
USP39-217ENST00000491659 RHOHQ15669 191 aa10.33□□□□□ -0.76
USP39-217ENST00000491659 FAM162BQ5T6X4 162 aa10.33□□□□□ -0.76
USP39-217ENST00000491659 COX8CQ7Z4L0 72 aa10.33□□□□□ -0.76
USP39-217ENST00000491659 PRADC1Q9BSG0 188 aa10.33□□□□□ -0.76
USP39-217ENST00000491659 LOC100131303A0A0U1RQF7 123 aa10.32□□□□□ -0.76
USP39-217ENST00000491659 H3BVH4 76 aa10.32□□□□□ -0.76
USP39-217ENST00000491659 M0R036 132 aa10.32□□□□□ -0.76
USP39-217ENST00000491659 LTAP01374 205 aa10.32□□□□□ -0.76
USP39-217ENST00000491659 MED14OSP0DP75 135 aa10.32□□□□□ -0.76
USP39-217ENST00000491659 LINC00315P59091 139 aa10.32□□□□□ -0.76
USP39-217ENST00000491659 SLC25A29Q8N8R3 303 aa10.32□□□□□ -0.76
USP39-217ENST00000491659 LY96Q9Y6Y9 160 aa10.32□□□□□ -0.76
USP39-217ENST00000491659 TRAV9-2A0A087WT02 112 aa10.31□□□□□ -0.76
USP39-217ENST00000491659 IGHV3-73A0A0B4J1V6 119 aa10.31□□□□□ -0.76
USP39-217ENST00000491659 TRBV6-4A0A1B0GX49 114 aa10.31□□□□□ -0.76
USP39-217ENST00000491659 A8MWV9 139 aa10.31□□□□□ -0.76
USP39-217ENST00000491659 KRBOX1C9JBD0 128 aa10.31□□□□□ -0.76
USP39-217ENST00000491659 S100A9P06702 114 aaKnown RBP10.31□□□□□ -0.76
USP39-217ENST00000491659 MGST1P10620 155 aaKnown RBP10.31□□□□□ -0.76
USP39-217ENST00000491659 CRIP1P50238 77 aa10.31□□□□□ -0.76
USP39-217ENST00000491659 PIK3CD-AS1Q5SR53 167 aa10.31□□□□□ -0.76
USP39-217ENST00000491659 ZNF575Q86XF7 245 aa10.31□□□□□ -0.76
USP39-217ENST00000491659 SYT8Q8NBV8 401 aa10.31□□□□□ -0.76
USP39-217ENST00000491659 IL36BQ9NZH7 164 aa10.31□□□□□ -0.76
USP39-217ENST00000491659 PKHD1P08F94 4074 aa10.31□□□□□ -0.76
USP39-217ENST00000491659 SCO2A0A1W2PP80 73 aa10.3□□□□□ -0.76
USP39-217ENST00000491659 BLOC1S1P78537 153 aa10.3□□□□□ -0.76
USP39-217ENST00000491659 ZNF674Q2M3X9 581 aa10.3□□□□□ -0.76
USP39-217ENST00000491659 DNLZQ5SXM8 178 aa10.3□□□□□ -0.76
USP39-217ENST00000491659 WFDC10BQ8IUB3 73 aa10.3□□□□□ -0.76
USP39-217ENST00000491659 PARLQ9H300 379 aa10.3□□□□□ -0.76
USP39-217ENST00000491659 C16orf90A8MZG2 172 aa10.29□□□□□ -0.76
USP39-217ENST00000491659 TEX46H3BTG2 121 aa10.29□□□□□ -0.76
USP39-217ENST00000491659 K7EP13 123 aa10.29□□□□□ -0.76
USP39-217ENST00000491659 EVI2AP22794 236 aa10.29□□□□□ -0.76
USP39-217ENST00000491659 RAB5CP51148 216 aa10.29□□□□□ -0.76
USP39-217ENST00000491659 TIRAPP58753 221 aa10.29□□□□□ -0.76
USP39-217ENST00000491659 LINC01559Q495D7 138 aa10.29□□□□□ -0.76
USP39-217ENST00000491659 ZFP2Q6ZN57 461 aa10.29□□□□□ -0.76
USP39-217ENST00000491659 MANBALQ9NQG1 85 aa10.29□□□□□ -0.76
USP39-217ENST00000491659 DNAH11Q96DT5 4516 aa10.29□□□□□ -0.76
USP39-217ENST00000491659 TMSB15BA0A087X1C1 80 aa10.28□□□□□ -0.76
USP39-217ENST00000491659 GRIFINA4D1Z8 144 aa10.28□□□□□ -0.76
USP39-217ENST00000491659 ARMS2P0C7Q2 107 aa10.28□□□□□ -0.76
USP39-217ENST00000491659 NFE4Q86UQ8 179 aa10.28□□□□□ -0.76
USP39-217ENST00000491659 PHLDA3Q9Y5J5 127 aa10.28□□□□□ -0.76
USP39-217ENST00000491659 RHODO00212 210 aa10.27□□□□□ -0.77
USP39-217ENST00000491659 DNAH10OSP0CZ25 163 aa10.27□□□□□ -0.77
USP39-217ENST00000491659 GNG13Q9P2W3 67 aa10.27□□□□□ -0.77
USP39-217ENST00000491659 TRAV8-6A0A0B4J262 113 aa10.26□□□□□ -0.77
USP39-217ENST00000491659 SULT1A2P50226 295 aa10.26□□□□□ -0.77
USP39-217ENST00000491659 OR10J3Q5JRS4 329 aa10.26□□□□□ -0.77
USP39-217ENST00000491659 SPATA12Q7Z6I5 190 aa10.26□□□□□ -0.77
USP39-217ENST00000491659 BAGE2Q86Y30 109 aa10.26□□□□□ -0.77
USP39-217ENST00000491659 C10orf126Q8N4M7 172 aa10.26□□□□□ -0.77
USP39-217ENST00000491659 DYNC1H1Q14204 4646 aaKnown RBP10.26□□□□□ -0.77
USP39-217ENST00000491659 TRAV1-1A0A0B4J248 108 aa10.25□□□□□ -0.77
USP39-217ENST00000491659 M0R381 172 aa10.25□□□□□ -0.77
USP39-217ENST00000491659 CRYGDP07320 174 aa10.25□□□□□ -0.77
USP39-217ENST00000491659 FAM74A4Q5TZK3 123 aa10.25□□□□□ -0.77
USP39-217ENST00000491659 DMRTA1Q5VZB9 504 aa10.25□□□□□ -0.77
USP39-217ENST00000491659 Q6ZRN7 208 aaPredicted RBP10.25□□□□□ -0.77
USP39-217ENST00000491659 ZFP82Q8N141 532 aa10.25□□□□□ -0.77
USP39-217ENST00000491659 ATP6V0E2Q8NHE4 81 aa10.25□□□□□ -0.77
USP39-217ENST00000491659 JPT2Q9H910 190 aa10.25□□□□□ -0.77
USP39-217ENST00000491659 MSRB1Q9NZV6 116 aa10.25□□□□□ -0.77
USP39-217ENST00000491659 IGHV3-38A0A0C4DH36 116 aa10.24□□□□□ -0.77
USP39-217ENST00000491659 RAB19A4D1S5 217 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms