RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 IGLV11-55A0A075B6I3 123 aa2.43□□□□□ -2.02
ECHDC1-217ENST00000488087 IGHV3OR15-7A0A075B7D8 119 aa2.43□□□□□ -2.02
ECHDC1-217ENST00000488087 IGLV3-32A0A0A0MS00 114 aa2.43□□□□□ -2.02
ECHDC1-217ENST00000488087 NDUFC2-KCTD14E9PQ53 114 aa2.43□□□□□ -2.02
ECHDC1-217ENST00000488087 J3QLI3 93 aa2.43□□□□□ -2.02
ECHDC1-217ENST00000488087 M0R135 149 aa2.43□□□□□ -2.02
ECHDC1-217ENST00000488087 LGALS9O00182 355 aa2.43□□□□□ -2.02
ECHDC1-217ENST00000488087 DPM2O94777 84 aa2.43□□□□□ -2.02
ECHDC1-217ENST00000488087 IGKCP01834 107 aa2.43□□□□□ -2.02
ECHDC1-217ENST00000488087 IGLC6P0CF74 106 aa2.43□□□□□ -2.02
ECHDC1-217ENST00000488087 COX7CP15954 63 aa2.43□□□□□ -2.02
ECHDC1-217ENST00000488087 COL8A2P25067 703 aa2.43□□□□□ -2.02
ECHDC1-217ENST00000488087 LOXP28300 417 aaPredicted RBP2.43□□□□□ -2.02
ECHDC1-217ENST00000488087 CACNG7P62955 275 aa2.43□□□□□ -2.02
ECHDC1-217ENST00000488087 TMEM170BQ5T4T1 132 aa2.43□□□□□ -2.02
ECHDC1-217ENST00000488087 C9orf153Q5TBE3 101 aa2.43□□□□□ -2.02
ECHDC1-217ENST00000488087 SDIM1Q6ZPB5 146 aa2.43□□□□□ -2.02
ECHDC1-217ENST00000488087 VKORC1L1Q8N0U8 176 aa2.43□□□□□ -2.02
ECHDC1-217ENST00000488087 ANKRD29Q8N6D5 301 aa2.43□□□□□ -2.02
ECHDC1-217ENST00000488087 OR1L8Q8NGR8 309 aa2.43□□□□□ -2.02
ECHDC1-217ENST00000488087 FAM57AQ8TBR7 257 aa2.43□□□□□ -2.02
ECHDC1-217ENST00000488087 FLYWCH2Q96CP2 140 aaKnown RBP2.43□□□□□ -2.02
ECHDC1-217ENST00000488087 FMC1Q96HJ9 113 aa2.43□□□□□ -2.02
ECHDC1-217ENST00000488087 MRPL20Q9BYC9 149 aaKnown RBP2.43□□□□□ -2.02
ECHDC1-217ENST00000488087 PRNDQ9UKY0 176 aa2.43□□□□□ -2.02
ECHDC1-217ENST00000488087 IGKV2D-26A0A0A0MRZ7 120 aa2.42□□□□□ -2.02
ECHDC1-217ENST00000488087 TRAV2A0A0B4J234 112 aa2.42□□□□□ -2.02
ECHDC1-217ENST00000488087 TRAV8-2A0A0B4J237 113 aa2.42□□□□□ -2.02
ECHDC1-217ENST00000488087 TRAV12-1A0A0B4J245 112 aa2.42□□□□□ -2.02
ECHDC1-217ENST00000488087 TRAV8-4A0A0B4J246 113 aa2.42□□□□□ -2.02
ECHDC1-217ENST00000488087 A0A1B0GUT8 65 aa2.42□□□□□ -2.02
ECHDC1-217ENST00000488087 INS-IGF2F8WCM5 200 aa2.42□□□□□ -2.02
ECHDC1-217ENST00000488087 H0YGG7 62 aa2.42□□□□□ -2.02
ECHDC1-217ENST00000488087 H3BT86 120 aa2.42□□□□□ -2.02
ECHDC1-217ENST00000488087 SLC25A20O43772 301 aa2.42□□□□□ -2.02
ECHDC1-217ENST00000488087 SS18L1O75177 396 aaPredicted RBP2.42□□□□□ -2.02
ECHDC1-217ENST00000488087 LTAP01374 205 aa2.42□□□□□ -2.02
ECHDC1-217ENST00000488087 P01737 135 aa2.42□□□□□ -2.02
ECHDC1-217ENST00000488087 CD7P09564 240 aa2.42□□□□□ -2.02
ECHDC1-217ENST00000488087 SLC25A16P16260 332 aa2.42□□□□□ -2.02
ECHDC1-217ENST00000488087 PLNP26678 52 aa2.42□□□□□ -2.02
ECHDC1-217ENST00000488087 PSMB8P28062 276 aa2.42□□□□□ -2.02
ECHDC1-217ENST00000488087 CD52P31358 61 aa2.42□□□□□ -2.02
ECHDC1-217ENST00000488087 UBE2AP49459 152 aa2.42□□□□□ -2.02
ECHDC1-217ENST00000488087 HIST1H4AP62805 103 aaKnown RBP2.42□□□□□ -2.02
ECHDC1-217ENST00000488087 PLGLB1Q02325 96 aa2.42□□□□□ -2.02
ECHDC1-217ENST00000488087 FAM27BQ5VT28 67 aa2.42□□□□□ -2.02
ECHDC1-217ENST00000488087 Q5XG85 94 aa2.42□□□□□ -2.02
ECHDC1-217ENST00000488087 MIC13Q5XKP0 118 aa2.42□□□□□ -2.02
ECHDC1-217ENST00000488087 LYPD2Q6UXB3 125 aa2.42□□□□□ -2.02
ECHDC1-217ENST00000488087 MIR17HGQ75NE6 70 aa2.42□□□□□ -2.02
ECHDC1-217ENST00000488087 AMN1Q8IY45 258 aa2.42□□□□□ -2.02
ECHDC1-217ENST00000488087 C10orf126Q8N4M7 172 aa2.42□□□□□ -2.02
ECHDC1-217ENST00000488087 DRAM1Q8N682 238 aa2.42□□□□□ -2.02
ECHDC1-217ENST00000488087 EEF1AKMT3Q96AZ1 226 aa2.42□□□□□ -2.02
ECHDC1-217ENST00000488087 PLEKHB2Q96CS7 222 aa2.42□□□□□ -2.02
ECHDC1-217ENST00000488087 DPH3Q96FX2 82 aa2.42□□□□□ -2.02
ECHDC1-217ENST00000488087 FAM167A-AS1Q96KT0 104 aa2.42□□□□□ -2.02
ECHDC1-217ENST00000488087 ZNF714Q96N38 554 aa2.42□□□□□ -2.02
ECHDC1-217ENST00000488087 NABP2Q9BQ15 211 aa2.42□□□□□ -2.02
ECHDC1-217ENST00000488087 PLA2G2FQ9BZM2 168 aa2.42□□□□□ -2.02
ECHDC1-217ENST00000488087 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.41□□□□□ -2.02
ECHDC1-217ENST00000488087 TRBV10-2A0A0K0K1G8 114 aa2.41□□□□□ -2.02
ECHDC1-217ENST00000488087 LOC107984640A0A0U1RRK4 108 aa2.41□□□□□ -2.02
ECHDC1-217ENST00000488087 TINCRA0A1B0GVN0 87 aa2.41□□□□□ -2.02
ECHDC1-217ENST00000488087 H7C1H1 209 aa2.41□□□□□ -2.02
ECHDC1-217ENST00000488087 K7EM74 188 aa2.41□□□□□ -2.02
ECHDC1-217ENST00000488087 ATOX1O00244 68 aa2.41□□□□□ -2.02
ECHDC1-217ENST00000488087 TCL1BO95988 128 aa2.41□□□□□ -2.02
ECHDC1-217ENST00000488087 STATHP02808 62 aa2.41□□□□□ -2.02
ECHDC1-217ENST00000488087 DEFA4P12838 97 aa2.41□□□□□ -2.02
ECHDC1-217ENST00000488087 FCER1GP30273 86 aa2.41□□□□□ -2.02
ECHDC1-217ENST00000488087 PSMB2P49721 201 aa2.41□□□□□ -2.02
ECHDC1-217ENST00000488087 UBE2L3P68036 154 aaKnown RBP2.41□□□□□ -2.02
ECHDC1-217ENST00000488087 REG3AQ06141 175 aa2.41□□□□□ -2.02
ECHDC1-217ENST00000488087 FAM104BQ5XKR9 115 aa2.41□□□□□ -2.02
ECHDC1-217ENST00000488087 Q6ZQT7 251 aa2.41□□□□□ -2.02
ECHDC1-217ENST00000488087 C5orf38Q86SI9 138 aa2.41□□□□□ -2.02
ECHDC1-217ENST00000488087 LINC00643Q86TS7 51 aa2.41□□□□□ -2.02
ECHDC1-217ENST00000488087 NDUFA11Q86Y39 141 aa2.41□□□□□ -2.02
ECHDC1-217ENST00000488087 ORMDL3Q8N138 153 aa2.41□□□□□ -2.02
ECHDC1-217ENST00000488087 OR8A1Q8NGG7 326 aa2.41□□□□□ -2.02
ECHDC1-217ENST00000488087 NXT2Q9NPJ8 142 aaKnown RBP2.41□□□□□ -2.02
ECHDC1-217ENST00000488087 EPDR1Q9UM22 224 aa2.41□□□□□ -2.02
ECHDC1-217ENST00000488087 F11RQ9Y624 299 aaKnown RBP2.41□□□□□ -2.02
ECHDC1-217ENST00000488087 COL5A1P20908 1838 aaPredicted RBP2.4□□□□□ -2.02
ECHDC1-217ENST00000488087 ATG2BQ96BY7 2078 aa2.4□□□□□ -2.02
ECHDC1-217ENST00000488087 IGLV4-69A0A075B6H9 119 aa2.4□□□□□ -2.03
ECHDC1-217ENST00000488087 IGKV2D-24A0A075B6R9 120 aa2.4□□□□□ -2.03
ECHDC1-217ENST00000488087 IGKV3D-11A0A0A0MRZ8 115 aa2.4□□□□□ -2.03
ECHDC1-217ENST00000488087 TRAV17A0A0B4J275 112 aa2.4□□□□□ -2.03
ECHDC1-217ENST00000488087 PLAC8L1A1L4L8 177 aa2.4□□□□□ -2.03
ECHDC1-217ENST00000488087 C5orf63A6NC05 138 aa2.4□□□□□ -2.03
ECHDC1-217ENST00000488087 LINC01549A6NIU2 74 aa2.4□□□□□ -2.03
ECHDC1-217ENST00000488087 LYRM9A8MSI8 78 aa2.4□□□□□ -2.03
ECHDC1-217ENST00000488087 C17orf98A8MV24 154 aa2.4□□□□□ -2.03
ECHDC1-217ENST00000488087 LY6LH3BQJ8 138 aa2.4□□□□□ -2.03
ECHDC1-217ENST00000488087 K7EMI3 77 aa2.4□□□□□ -2.03
ECHDC1-217ENST00000488087 FSTL3O95633 263 aa2.4□□□□□ -2.03
ECHDC1-217ENST00000488087 IGLV2-23P01705 113 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms