RNA–Protein interactions for RNA: ENST00000488023.1

HFM1-208, Transcript of HFM1, ATP dependent DNA helicase homolog, humanhuman

TSL 5

Gene HFM1, Length 1,699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1-208ENST00000488023 COL4A2P08572 1712 aa1.79□□□□□ -2.12
HFM1-208ENST00000488023 PARP4Q9UKK3 1724 aaKnown RBP1.79□□□□□ -2.12
HFM1-208ENST00000488023 TRBV20-1A0A075B6N2 111 aa1.79□□□□□ -2.12
HFM1-208ENST00000488023 CCDC179H3BU77 68 aa1.79□□□□□ -2.12
HFM1-208ENST00000488023 CORTO00230 105 aa1.79□□□□□ -2.12
HFM1-208ENST00000488023 ERC2-IT1O76042 136 aa1.79□□□□□ -2.12
HFM1-208ENST00000488023 IGKV1-17P01599 117 aa1.79□□□□□ -2.12
HFM1-208ENST00000488023 RBP4P02753 201 aa1.79□□□□□ -2.12
HFM1-208ENST00000488023 PDE6HQ13956 83 aa1.79□□□□□ -2.12
HFM1-208ENST00000488023 ZCCHC23Q6ZST2 131 aa1.79□□□□□ -2.12
HFM1-208ENST00000488023 TCTEX1D1Q8N7M0 179 aa1.79□□□□□ -2.12
HFM1-208ENST00000488023 DPH3Q96FX2 82 aa1.79□□□□□ -2.12
HFM1-208ENST00000488023 PAPPA2Q9BXP8 1791 aa1.79□□□□□ -2.12
HFM1-208ENST00000488023 PLXNA3P51805 1871 aa1.79□□□□□ -2.12
HFM1-208ENST00000488023 AKAP11Q9UKA4 1901 aa1.78□□□□□ -2.12
HFM1-208ENST00000488023 MYOM3Q5VTT5 1437 aa1.78□□□□□ -2.12
HFM1-208ENST00000488023 PIEZO1Q92508 2521 aa1.78□□□□□ -2.12
HFM1-208ENST00000488023 TRIOBPQ9H2D6 2365 aa1.78□□□□□ -2.12
HFM1-208ENST00000488023 IGKV1D-17A0A075B6S4 117 aa1.78□□□□□ -2.12
HFM1-208ENST00000488023 A0A087WSZ3 146 aa1.78□□□□□ -2.12
HFM1-208ENST00000488023 IGHV1-24A0A0C4DH33 117 aa1.78□□□□□ -2.12
HFM1-208ENST00000488023 SPRR5A0A1B0GTR4 108 aa1.78□□□□□ -2.12
HFM1-208ENST00000488023 EDF1O60869 148 aaKnown RBP1.78□□□□□ -2.12
HFM1-208ENST00000488023 APODP05090 189 aa1.78□□□□□ -2.12
HFM1-208ENST00000488023 PYYP10082 97 aa1.78□□□□□ -2.12
HFM1-208ENST00000488023 ETV6P41212 452 aa1.78□□□□□ -2.12
HFM1-208ENST00000488023 MIC13Q5XKP0 118 aa1.78□□□□□ -2.12
HFM1-208ENST00000488023 IDO2Q6ZQW0 420 aa1.78□□□□□ -2.12
HFM1-208ENST00000488023 TCEAL7Q9BRU2 100 aa1.78□□□□□ -2.12
HFM1-208ENST00000488023 PDCD10Q9BUL8 212 aa1.78□□□□□ -2.12
HFM1-208ENST00000488023 RP1P56715 2156 aa1.78□□□□□ -2.12
HFM1-208ENST00000488023 PIK3C2BO00750 1634 aa1.78□□□□□ -2.12
HFM1-208ENST00000488023 HEATR5BQ9P2D3 2071 aa1.78□□□□□ -2.12
HFM1-208ENST00000488023 ARFGEF1Q9Y6D6 1849 aa1.78□□□□□ -2.13
HFM1-208ENST00000488023 INO80Q9ULG1 1556 aaPredicted RBP1.77□□□□□ -2.13
HFM1-208ENST00000488023 MIR22HGQ0VDD5 57 aa1.77□□□□□ -2.13
HFM1-208ENST00000488023 KRTAP21-3Q3LHN1 58 aa1.77□□□□□ -2.13
HFM1-208ENST00000488023 FOXI2Q6ZQN5 318 aa1.77□□□□□ -2.13
HFM1-208ENST00000488023 Q6ZUT4 128 aa1.77□□□□□ -2.13
HFM1-208ENST00000488023 Q96M85 177 aa1.77□□□□□ -2.13
HFM1-208ENST00000488023 CCDC167Q9P0B6 97 aa1.77□□□□□ -2.13
HFM1-208ENST00000488023 KIF1AQ12756 1690 aa1.77□□□□□ -2.13
HFM1-208ENST00000488023 CTTNBP2Q8WZ74 1663 aa1.77□□□□□ -2.13
HFM1-208ENST00000488023 PEAK1Q9H792 1746 aa1.77□□□□□ -2.13
HFM1-208ENST00000488023 FMN2Q9NZ56 1722 aa1.77□□□□□ -2.13
HFM1-208ENST00000488023 LAMB2P55268 1798 aa1.77□□□□□ -2.13
HFM1-208ENST00000488023 SBF2Q86WG5 1849 aa1.77□□□□□ -2.13
HFM1-208ENST00000488023 ZNF609O15014 1411 aa1.77□□□□□ -2.13
HFM1-208ENST00000488023 DUOX2Q9NRD8 1548 aa1.77□□□□□ -2.13
HFM1-208ENST00000488023 TRAV14DV4A0A0A6YYC5 116 aa1.77□□□□□ -2.13
HFM1-208ENST00000488023 PNMA8CA0A1B0GUJ8 204 aa1.77□□□□□ -2.13
HFM1-208ENST00000488023 AKAIN1P0CW23 69 aa1.77□□□□□ -2.13
HFM1-208ENST00000488023 CXCL8P10145 99 aa1.77□□□□□ -2.13
HFM1-208ENST00000488023 HIST1H1DP16402 221 aaKnown RBP1.77□□□□□ -2.13
HFM1-208ENST00000488023 BRS3P32247 399 aa1.77□□□□□ -2.13
HFM1-208ENST00000488023 CASC2Q6XLA1 102 aa1.77□□□□□ -2.13
HFM1-208ENST00000488023 ZNF833PQ6ZTB9 187 aa1.77□□□□□ -2.13
HFM1-208ENST00000488023 SNX29P2Q8IUI4 249 aa1.77□□□□□ -2.13
HFM1-208ENST00000488023 KCNRGQ8N5I3 272 aa1.77□□□□□ -2.13
HFM1-208ENST00000488023 PP6455Q8WZ26 134 aa1.77□□□□□ -2.13
HFM1-208ENST00000488023 TXNDC17Q9BRA2 123 aa1.77□□□□□ -2.13
HFM1-208ENST00000488023 LCE3DQ9BYE3 92 aa1.77□□□□□ -2.13
HFM1-208ENST00000488023 MPC1Q9Y5U8 109 aa1.77□□□□□ -2.13
HFM1-208ENST00000488023 UTRNP46939 3433 aa1.77□□□□□ -2.13
HFM1-208ENST00000488023 CHD8Q9HCK8 2581 aa1.76□□□□□ -2.13
HFM1-208ENST00000488023 MPDZO75970 2070 aa1.76□□□□□ -2.13
HFM1-208ENST00000488023 LMTK2Q8IWU2 1503 aa1.76□□□□□ -2.13
HFM1-208ENST00000488023 TIAM2Q8IVF5 1701 aa1.76□□□□□ -2.13
HFM1-208ENST00000488023 AKAP12Q02952 1782 aa1.76□□□□□ -2.13
HFM1-208ENST00000488023 ZNF736B4DX44 427 aaPredicted RBP1.76□□□□□ -2.13
HFM1-208ENST00000488023 M0R2P5 195 aa1.76□□□□□ -2.13
HFM1-208ENST00000488023 SNAPC5O75971 98 aa1.76□□□□□ -2.13
HFM1-208ENST00000488023 C1orf137Q5JT78 98 aa1.76□□□□□ -2.13
HFM1-208ENST00000488023 KRTAP26-1Q6PEX3 210 aa1.76□□□□□ -2.13
HFM1-208ENST00000488023 FP248Q71RG6 208 aaPredicted RBP1.76□□□□□ -2.13
HFM1-208ENST00000488023 GKN2Q86XP6 184 aa1.76□□□□□ -2.13
HFM1-208ENST00000488023 ATOH7Q8N100 152 aa1.76□□□□□ -2.13
HFM1-208ENST00000488023 PSMG3Q9BT73 122 aaPredicted RBP1.76□□□□□ -2.13
HFM1-208ENST00000488023 TRPM7Q96QT4 1865 aa1.75□□□□□ -2.13
HFM1-208ENST00000488023 KIAA1549Q9HCM3 1950 aa1.75□□□□□ -2.13
HFM1-208ENST00000488023 MYO9BQ13459 2157 aa1.75□□□□□ -2.13
HFM1-208ENST00000488023 C20orf202A1L168 122 aa1.75□□□□□ -2.13
HFM1-208ENST00000488023 PRB4P10163 310 aaPredicted RBP1.75□□□□□ -2.13
HFM1-208ENST00000488023 FGF7P21781 194 aa1.75□□□□□ -2.13
HFM1-208ENST00000488023 CNBPP62633 177 aaKnown RBP1.75□□□□□ -2.13
HFM1-208ENST00000488023 C2orf82Q6UX34 121 aa1.75□□□□□ -2.13
HFM1-208ENST00000488023 SMIM7Q9BQ49 75 aa1.75□□□□□ -2.13
HFM1-208ENST00000488023 SEC11CQ9BY50 192 aa1.75□□□□□ -2.13
HFM1-208ENST00000488023 COA4Q9NYJ1 87 aa1.75□□□□□ -2.13
HFM1-208ENST00000488023 BOKQ9UMX3 212 aaPredicted RBP1.75□□□□□ -2.13
HFM1-208ENST00000488023 PHRF1Q9P1Y6 1649 aaKnown RBP1.75□□□□□ -2.13
HFM1-208ENST00000488023 MUC6Q6W4X9 2439 aa1.74□□□□□ -2.13
HFM1-208ENST00000488023 MYH7P12883 1935 aa1.74□□□□□ -2.13
HFM1-208ENST00000488023 ITSN1Q15811 1721 aa1.74□□□□□ -2.13
HFM1-208ENST00000488023 COL4A5P29400 1685 aa1.74□□□□□ -2.13
HFM1-208ENST00000488023 USP54Q70EL1 1684 aa1.74□□□□□ -2.13
HFM1-208ENST00000488023 SSC5DA1L4H1 1573 aa1.74□□□□□ -2.13
HFM1-208ENST00000488023 TROQ12816 1431 aaPredicted RBP1.74□□□□□ -2.13
HFM1-208ENST00000488023 TRAV12-2A0A075B6T6 113 aa1.74□□□□□ -2.13
HFM1-208ENST00000488023 TRBV6-8A0A0A6YYG3 113 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 184.2 ms