RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 ZNF56Q15929 161 aa8.87□□□□□ -0.99
SEC61A1-205ENST00000483956 GFRALQ6UXV0 394 aa8.87□□□□□ -0.99
SEC61A1-205ENST00000483956 DTX2Q86UW9 622 aa8.87□□□□□ -0.99
SEC61A1-205ENST00000483956 NPBQ8NG41 125 aa8.87□□□□□ -0.99
SEC61A1-205ENST00000483956 SPTA1P02549 2419 aa8.87□□□□□ -0.99
SEC61A1-205ENST00000483956 TRAV26-2A0A0B4J265 109 aa8.87□□□□□ -0.99
SEC61A1-205ENST00000483956 H7C2G1 150 aa8.87□□□□□ -0.99
SEC61A1-205ENST00000483956 WIPF1O43516 503 aa8.87□□□□□ -0.99
SEC61A1-205ENST00000483956 COX6B1P14854 86 aa8.87□□□□□ -0.99
SEC61A1-205ENST00000483956 C9orf153Q5TBE3 101 aa8.87□□□□□ -0.99
SEC61A1-205ENST00000483956 PRO1854Q9UHT4 67 aa8.87□□□□□ -0.99
SEC61A1-205ENST00000483956 COL12A1Q99715 3063 aa8.87□□□□□ -0.99
SEC61A1-205ENST00000483956 IGLV11-55A0A075B6I3 123 aa8.86□□□□□ -0.99
SEC61A1-205ENST00000483956 IGKV2-40A0A087WW87 121 aaPredicted RBP8.86□□□□□ -0.99
SEC61A1-205ENST00000483956 IGKV2D-40P01614 121 aaPredicted RBP8.86□□□□□ -0.99
SEC61A1-205ENST00000483956 ELANEP08246 267 aa8.86□□□□□ -0.99
SEC61A1-205ENST00000483956 MFAP4P55083 255 aa8.86□□□□□ -0.99
SEC61A1-205ENST00000483956 Q6ZS46 218 aa8.86□□□□□ -0.99
SEC61A1-205ENST00000483956 PSMG3-AS1Q96PY0 264 aa8.86□□□□□ -0.99
SEC61A1-205ENST00000483956 NDUFA7O95182 113 aa8.86□□□□□ -0.99
SEC61A1-205ENST00000483956 EMP1P54849 157 aa8.86□□□□□ -0.99
SEC61A1-205ENST00000483956 HES1Q14469 280 aa8.86□□□□□ -0.99
SEC61A1-205ENST00000483956 Q8TAT8 98 aa8.86□□□□□ -0.99
SEC61A1-205ENST00000483956 TRAV12-1A0A0B4J245 112 aa8.86□□□□□ -0.99
SEC61A1-205ENST00000483956 F8W735 103 aaPredicted RBP8.86□□□□□ -0.99
SEC61A1-205ENST00000483956 HERVK_113P63121 156 aa8.86□□□□□ -0.99
SEC61A1-205ENST00000483956 IGFBPL1Q8WX77 278 aa8.86□□□□□ -0.99
SEC61A1-205ENST00000483956 CFHR4Q92496 578 aa8.86□□□□□ -0.99
SEC61A1-205ENST00000483956 FANCD2OSQ96PS1 177 aa8.86□□□□□ -0.99
SEC61A1-205ENST00000483956 A0A0J9YY99 117 aa8.85□□□□□ -0.99
SEC61A1-205ENST00000483956 FAM236AA0A1B0GUQ0 79 aa8.85□□□□□ -0.99
SEC61A1-205ENST00000483956 FAM236BA0A1B0GV22 79 aa8.85□□□□□ -0.99
SEC61A1-205ENST00000483956 LGALS9O00182 355 aa8.85□□□□□ -0.99
SEC61A1-205ENST00000483956 HLA-DMBP28068 263 aa8.85□□□□□ -0.99
SEC61A1-205ENST00000483956 TIMD4Q96H15 378 aa8.85□□□□□ -0.99
SEC61A1-205ENST00000483956 EDA2RQ9HAV5 297 aa8.85□□□□□ -0.99
SEC61A1-205ENST00000483956 RELNP78509 3460 aa8.85□□□□□ -0.99
SEC61A1-205ENST00000483956 J3KT08 172 aa8.85□□□□□ -0.99
SEC61A1-205ENST00000483956 ORM1P02763 201 aa8.85□□□□□ -0.99
SEC61A1-205ENST00000483956 H3BMM0 161 aa8.84□□□□□ -0.99
SEC61A1-205ENST00000483956 IGHV3-30P01768 117 aa8.84□□□□□ -0.99
SEC61A1-205ENST00000483956 IGHV4-39P01824 125 aa8.84□□□□□ -0.99
SEC61A1-205ENST00000483956 TRGV3P03979 118 aa8.84□□□□□ -0.99
SEC61A1-205ENST00000483956 IGHV3-30-5P0DP03 117 aa8.84□□□□□ -0.99
SEC61A1-205ENST00000483956 RPL13AP40429 203 aaKnown RBP8.84□□□□□ -0.99
SEC61A1-205ENST00000483956 CEMP1Q6PRD7 247 aaPredicted RBP8.84□□□□□ -0.99
SEC61A1-205ENST00000483956 LY6G5BQ8NDX9 201 aa8.84□□□□□ -0.99
SEC61A1-205ENST00000483956 UBE2WQ96B02 151 aa8.84□□□□□ -0.99
SEC61A1-205ENST00000483956 TMEM101Q96IK0 257 aa8.84□□□□□ -0.99
SEC61A1-205ENST00000483956 M0R2P5 195 aa8.84□□□□□ -0.99
SEC61A1-205ENST00000483956 LY6DQ14210 128 aa8.84□□□□□ -0.99
SEC61A1-205ENST00000483956 LINC01620Q4KN68 170 aa8.84□□□□□ -0.99
SEC61A1-205ENST00000483956 DPM3Q9P2X0 92 aa8.84□□□□□ -0.99
SEC61A1-205ENST00000483956 TRGV11A0A075B6L2 103 aa8.83□□□□□ -1
SEC61A1-205ENST00000483956 NRACQ8N912 160 aa8.83□□□□□ -1
SEC61A1-205ENST00000483956 NEXN-AS1Q8NBZ9 246 aa8.83□□□□□ -1
SEC61A1-205ENST00000483956 SCGB3A1Q96QR1 104 aa8.83□□□□□ -1
SEC61A1-205ENST00000483956 EIF4EBP3O60516 100 aaPredicted RBP8.83□□□□□ -1
SEC61A1-205ENST00000483956 TCF15Q12870 199 aa8.83□□□□□ -1
SEC61A1-205ENST00000483956 LRRC75A-AS1Q8N1F1 130 aa8.83□□□□□ -1
SEC61A1-205ENST00000483956 KALRNO60229 2985 aa8.83□□□□□ -1
SEC61A1-205ENST00000483956 RBAKDNA6NC62 111 aa8.83□□□□□ -1
SEC61A1-205ENST00000483956 S4R3C0 116 aa8.83□□□□□ -1
SEC61A1-205ENST00000483956 C3orf22Q8N5N4 141 aa8.82□□□□□ -1
SEC61A1-205ENST00000483956 SMAD5-AS1Q9Y6J3 95 aa8.82□□□□□ -1
SEC61A1-205ENST00000483956 TRBV7-7A0A0K0K1E9 115 aa8.82□□□□□ -1
SEC61A1-205ENST00000483956 LYNX1G3V0Z9 82 aa8.82□□□□□ -1
SEC61A1-205ENST00000483956 IGHV3-33P01772 117 aa8.82□□□□□ -1
SEC61A1-205ENST00000483956 LYNX1P0DP58 116 aa8.82□□□□□ -1
SEC61A1-205ENST00000483956 BEX4Q9NWD9 120 aaPredicted RBP8.82□□□□□ -1
SEC61A1-205ENST00000483956 PMVKQ15126 192 aa8.81□□□□□ -1
SEC61A1-205ENST00000483956 ANKRD11Q6UB99 2663 aaPredicted RBP8.81□□□□□ -1
SEC61A1-205ENST00000483956 DUX3Q96PT4 197 aa8.81□□□□□ -1
SEC61A1-205ENST00000483956 ODF3BA8MYP8 253 aa8.81□□□□□ -1
SEC61A1-205ENST00000483956 CD3EP07766 207 aa8.81□□□□□ -1
SEC61A1-205ENST00000483956 ATXN8Q156A1 80 aa8.81□□□□□ -1
SEC61A1-205ENST00000483956 ATRXP46100 2492 aa8.81□□□□□ -1
SEC61A1-205ENST00000483956 POM121L12Q8N7R1 296 aa8.8□□□□□ -1
SEC61A1-205ENST00000483956 ADGRG4Q8IZF6 3080 aa8.8□□□□□ -1
SEC61A1-205ENST00000483956 TRBV10-2A0A0K0K1G8 114 aa8.8□□□□□ -1
SEC61A1-205ENST00000483956 CTSGP08311 255 aa8.8□□□□□ -1
SEC61A1-205ENST00000483956 PIEZO1Q92508 2521 aa8.8□□□□□ -1
SEC61A1-205ENST00000483956 NDPQ00604 133 aa8.8□□□□□ -1
SEC61A1-205ENST00000483956 EBI3Q14213 229 aa8.8□□□□□ -1
SEC61A1-205ENST00000483956 IL17RELQ6ZVW7 336 aa8.8□□□□□ -1
SEC61A1-205ENST00000483956 PCNX1Q96RV3 2341 aa8.79□□□□□ -1
SEC61A1-205ENST00000483956 BSNQ9UPA5 3926 aa8.79□□□□□ -1
SEC61A1-205ENST00000483956 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.79□□□□□ -1
SEC61A1-205ENST00000483956 ZNF22P17026 224 aaPredicted RBP8.79□□□□□ -1
SEC61A1-205ENST00000483956 TSPEAR-AS2P59090 65 aa8.79□□□□□ -1
SEC61A1-205ENST00000483956 Q1RN00 199 aa8.79□□□□□ -1
SEC61A1-205ENST00000483956 ZNF672Q499Z4 452 aaPredicted RBP8.79□□□□□ -1
SEC61A1-205ENST00000483956 IGFL4Q6B9Z1 124 aa8.79□□□□□ -1
SEC61A1-205ENST00000483956 SLC25A29Q8N8R3 303 aa8.79□□□□□ -1
SEC61A1-205ENST00000483956 A0A1B0GX51 115 aa8.79□□□□□ -1
SEC61A1-205ENST00000483956 M0R1W7 72 aa8.79□□□□□ -1
SEC61A1-205ENST00000483956 P0DMU3 169 aa8.79□□□□□ -1
SEC61A1-205ENST00000483956 FAM231AP0DMU4 169 aa8.79□□□□□ -1
SEC61A1-205ENST00000483956 FAM231CP0DMU5 169 aa8.79□□□□□ -1
SEC61A1-205ENST00000483956 HERVK_113P61574 105 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms