RNA–Protein interactions for RNA: ENST00000483687.5

PCCB-216, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-216ENST00000483687 C11orf72Q8NBR9 251 aa13.71□□□□□ -0.21
PCCB-216ENST00000483687 PHLDA3Q9Y5J5 127 aa13.71□□□□□ -0.21
PCCB-216ENST00000483687 MUC4Q99102 2169 aa13.71□□□□□ -0.21
PCCB-216ENST00000483687 SMIM9A6NGZ8 99 aa13.7□□□□□ -0.22
PCCB-216ENST00000483687 ZNF493Q6ZR52 646 aa13.7□□□□□ -0.22
PCCB-216ENST00000483687 BORCS7Q96B45 105 aa13.7□□□□□ -0.22
PCCB-216ENST00000483687 C9orf85Q96MD7 179 aa13.7□□□□□ -0.22
PCCB-216ENST00000483687 TP53TG1Q9Y2A0 90 aa13.7□□□□□ -0.22
PCCB-216ENST00000483687 OR10AG1Q8NH19 301 aa13.7□□□□□ -0.22
PCCB-216ENST00000483687 BTF3L4Q96K17 158 aa13.7□□□□□ -0.22
PCCB-216ENST00000483687 OVOL2Q9BRP0 275 aa13.7□□□□□ -0.22
PCCB-216ENST00000483687 RETNQ9HD89 108 aa13.7□□□□□ -0.22
PCCB-216ENST00000483687 SCRT2Q9NQ03 307 aa13.7□□□□□ -0.22
PCCB-216ENST00000483687 A0A1B0GUT8 65 aa13.69□□□□□ -0.22
PCCB-216ENST00000483687 SNURFLB1AK76 121 aa13.69□□□□□ -0.22
PCCB-216ENST00000483687 SPANXN1Q5VSR9 72 aa13.69□□□□□ -0.22
PCCB-216ENST00000483687 TRAV9-1A0A075B6T8 112 aa13.68□□□□□ -0.22
PCCB-216ENST00000483687 DEFA6Q01524 100 aa13.68□□□□□ -0.22
PCCB-216ENST00000483687 MRPL54Q6P161 138 aaKnown RBP13.68□□□□□ -0.22
PCCB-216ENST00000483687 TGIF2-C20orf24A0A0A6YYL0 155 aa13.67□□□□□ -0.22
PCCB-216ENST00000483687 M0R381 172 aa13.67□□□□□ -0.22
PCCB-216ENST00000483687 CNFNQ9BYD5 112 aa13.67□□□□□ -0.22
PCCB-216ENST00000483687 MIFP14174 115 aa13.67□□□□□ -0.22
PCCB-216ENST00000483687 NTF3P20783 257 aa13.67□□□□□ -0.22
PCCB-216ENST00000483687 YPEL4Q96NS1 127 aa13.67□□□□□ -0.22
PCCB-216ENST00000483687 SPXQ9BT56 116 aa13.67□□□□□ -0.22
PCCB-216ENST00000483687 PLAC8L1A1L4L8 177 aa13.66□□□□□ -0.22
PCCB-216ENST00000483687 EMP1P54849 157 aa13.66□□□□□ -0.22
PCCB-216ENST00000483687 CACNG7P62955 275 aa13.66□□□□□ -0.22
PCCB-216ENST00000483687 TWIST1Q15672 202 aa13.66□□□□□ -0.22
PCCB-216ENST00000483687 ZFP82Q8N141 532 aa13.66□□□□□ -0.22
PCCB-216ENST00000483687 SPATA25Q9BR10 227 aa13.66□□□□□ -0.22
PCCB-216ENST00000483687 TRBV24-1A0A075B6N3 115 aa13.65□□□□□ -0.22
PCCB-216ENST00000483687 IGHV4-28A0A0C4DH34 117 aa13.65□□□□□ -0.22
PCCB-216ENST00000483687 RIGQ13278 110 aa13.65□□□□□ -0.22
PCCB-216ENST00000483687 DMRTA1Q5VZB9 504 aa13.65□□□□□ -0.22
PCCB-216ENST00000483687 ATP5L2Q7Z4Y8 100 aa13.65□□□□□ -0.22
PCCB-216ENST00000483687 IL17DQ8TAD2 202 aa13.65□□□□□ -0.22
PCCB-216ENST00000483687 TM2D3Q9BRN9 247 aa13.65□□□□□ -0.22
PCCB-216ENST00000483687 M0R2P5 195 aa13.64□□□□□ -0.23
PCCB-216ENST00000483687 ZNF876PQ49A33 203 aa13.64□□□□□ -0.23
PCCB-216ENST00000483687 WDR73Q6P4I2 378 aa13.64□□□□□ -0.23
PCCB-216ENST00000483687 Q8NAQ8 132 aa13.64□□□□□ -0.23
PCCB-216ENST00000483687 SYT8Q8NBV8 401 aa13.64□□□□□ -0.23
PCCB-216ENST00000483687 NOP10Q9NPE3 64 aaKnown RBP13.64□□□□□ -0.23
PCCB-216ENST00000483687 CAMPP49913 170 aa13.64□□□□□ -0.23
PCCB-216ENST00000483687 HBBP68871 147 aa13.64□□□□□ -0.23
PCCB-216ENST00000483687 FAM210BQ96KR6 192 aa13.64□□□□□ -0.23
PCCB-216ENST00000483687 MSRB1Q9NZV6 116 aa13.64□□□□□ -0.23
PCCB-216ENST00000483687 IGHV4-4A0A075B6R2 117 aa13.63□□□□□ -0.23
PCCB-216ENST00000483687 DEFB4AO15263 64 aa13.63□□□□□ -0.23
PCCB-216ENST00000483687 DAZ2Q13117 558 aaKnown RBP13.63□□□□□ -0.23
PCCB-216ENST00000483687 A0A1B0GXF2 115 aa13.62□□□□□ -0.23
PCCB-216ENST00000483687 NXPH4O95158 308 aa13.62□□□□□ -0.23
PCCB-216ENST00000483687 B9D2Q9BPU9 175 aa13.62□□□□□ -0.23
PCCB-216ENST00000483687 MRPL16Q9NX20 251 aaKnown RBP13.62□□□□□ -0.23
PCCB-216ENST00000483687 TRGV1A0A0A0MS02 117 aa13.61□□□□□ -0.23
PCCB-216ENST00000483687 A0A1B0GW15 77 aa13.61□□□□□ -0.23
PCCB-216ENST00000483687 COLCA2A8K830 154 aa13.61□□□□□ -0.23
PCCB-216ENST00000483687 ZMAT4Q9H898 229 aa13.61□□□□□ -0.23
PCCB-216ENST00000483687 RASL11AQ6T310 242 aa13.61□□□□□ -0.23
PCCB-216ENST00000483687 HUWE1Q7Z6Z7 4374 aaKnown RBP13.61□□□□□ -0.23
PCCB-216ENST00000483687 S100A8P05109 93 aa13.6□□□□□ -0.23
PCCB-216ENST00000483687 RAB4BP61018 213 aa13.6□□□□□ -0.23
PCCB-216ENST00000483687 LGALS9BQ3B8N2 356 aa13.6□□□□□ -0.23
PCCB-216ENST00000483687 Q6ZTI0 123 aa13.6□□□□□ -0.23
PCCB-216ENST00000483687 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.6□□□□□ -0.23
PCCB-216ENST00000483687 RASL10AQ92737 203 aa13.6□□□□□ -0.23
PCCB-216ENST00000483687 PTH2Q96A98 100 aa13.6□□□□□ -0.23
PCCB-216ENST00000483687 DNAH9Q9NYC9 4486 aa13.6□□□□□ -0.23
PCCB-216ENST00000483687 MEGF8Q7Z7M0 2845 aa13.6□□□□□ -0.23
PCCB-216ENST00000483687 PRKDCP78527 4128 aaKnown RBP13.59□□□□□ -0.23
PCCB-216ENST00000483687 TRGC1P0CF51 173 aa13.59□□□□□ -0.23
PCCB-216ENST00000483687 AP1S3Q96PC3 154 aa13.59□□□□□ -0.23
PCCB-216ENST00000483687 TENM3Q9P273 2699 aa13.59□□□□□ -0.23
PCCB-216ENST00000483687 EVI2AP22794 236 aa13.59□□□□□ -0.23
PCCB-216ENST00000483687 PIK3CD-AS1Q5SR53 167 aa13.59□□□□□ -0.23
PCCB-216ENST00000483687 SMIM15Q7Z3B0 74 aa13.59□□□□□ -0.23
PCCB-216ENST00000483687 JPT2Q9H910 190 aa13.59□□□□□ -0.23
PCCB-216ENST00000483687 COX19Q49B96 90 aa13.57□□□□□ -0.24
PCCB-216ENST00000483687 FAM222AQ5U5X8 452 aa13.57□□□□□ -0.24
PCCB-216ENST00000483687 C14orf178Q8N769 122 aaPredicted RBP13.57□□□□□ -0.24
PCCB-216ENST00000483687 NDUFAF3Q9BU61 184 aa13.57□□□□□ -0.24
PCCB-216ENST00000483687 GAGE12BA1L429 117 aa13.56□□□□□ -0.24
PCCB-216ENST00000483687 LYRM9A8MSI8 78 aa13.56□□□□□ -0.24
PCCB-216ENST00000483687 GAGE7O76087 117 aa13.56□□□□□ -0.24
PCCB-216ENST00000483687 GAGE12FP0CL80 117 aa13.56□□□□□ -0.24
PCCB-216ENST00000483687 GAGE12GP0CL81 117 aa13.56□□□□□ -0.24
PCCB-216ENST00000483687 GAGE12IP0CL82 117 aa13.56□□□□□ -0.24
PCCB-216ENST00000483687 RAB5AP20339 215 aa13.56□□□□□ -0.24
PCCB-216ENST00000483687 TMEM136Q6ZRR5 245 aa13.56□□□□□ -0.24
PCCB-216ENST00000483687 GNB1LQ9BYB4 327 aa13.56□□□□□ -0.24
PCCB-216ENST00000483687 TMEM191AQ9H0A3 160 aa13.56□□□□□ -0.24
PCCB-216ENST00000483687 C11orf68Q9H3H3 251 aaKnown RBP13.56□□□□□ -0.24
PCCB-216ENST00000483687 DKK2Q9UBU2 259 aa13.56□□□□□ -0.24
PCCB-216ENST00000483687 NACAE9PAV3 2078 aa13.56□□□□□ -0.24
PCCB-216ENST00000483687 A8MWV9 139 aa13.56□□□□□ -0.24
PCCB-216ENST00000483687 SMIM17P0DL12 118 aa13.56□□□□□ -0.24
PCCB-216ENST00000483687 RPS10P46783 165 aaKnown RBP13.56□□□□□ -0.24
PCCB-216ENST00000483687 TRGV2A0A075B6R0 118 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms