RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 C19orf71A6NCJ1 209 aa14.62□□□□□ -0.07
CCM2-214ENST00000481194 HIVEP2P31629 2446 aa14.62□□□□□ -0.07
CCM2-214ENST00000481194 GAGE12JA6NER3 117 aa14.62□□□□□ -0.07
CCM2-214ENST00000481194 GAGE1Q13065 139 aa14.62□□□□□ -0.07
CCM2-214ENST00000481194 GAGE4Q13068 117 aa14.62□□□□□ -0.07
CCM2-214ENST00000481194 GAGE5Q13069 117 aa14.62□□□□□ -0.07
CCM2-214ENST00000481194 GAGE13Q4V321 117 aa14.62□□□□□ -0.07
CCM2-214ENST00000481194 MRPL16Q9NX20 251 aaKnown RBP14.62□□□□□ -0.07
CCM2-214ENST00000481194 LINC00469Q8N7U9 141 aa14.62□□□□□ -0.07
CCM2-214ENST00000481194 WDR87Q6ZQQ6 2873 aa14.61□□□□□ -0.07
CCM2-214ENST00000481194 PHLDA1Q8WV24 401 aaPredicted RBP14.61□□□□□ -0.07
CCM2-214ENST00000481194 NOP10Q9NPE3 64 aaKnown RBP14.61□□□□□ -0.07
CCM2-214ENST00000481194 RASL10AQ92737 203 aa14.61□□□□□ -0.07
CCM2-214ENST00000481194 LINC00587B1AMM8 73 aa14.6□□□□□ -0.07
CCM2-214ENST00000481194 ATRXP46100 2492 aa14.6□□□□□ -0.07
CCM2-214ENST00000481194 C3orf79P0CE67 100 aa14.6□□□□□ -0.07
CCM2-214ENST00000481194 RIPPLY3P57055 190 aa14.6□□□□□ -0.07
CCM2-214ENST00000481194 CFHR3Q02985 330 aa14.6□□□□□ -0.07
CCM2-214ENST00000481194 PRR31Q5SQ13 230 aa14.6□□□□□ -0.07
CCM2-214ENST00000481194 C2orf66Q6UXQ4 117 aa14.6□□□□□ -0.07
CCM2-214ENST00000481194 TMEM243Q9BU79 118 aa14.6□□□□□ -0.07
CCM2-214ENST00000481194 NPYP01303 97 aa14.59□□□□□ -0.07
CCM2-214ENST00000481194 SPG11Q96JI7 2443 aa14.59□□□□□ -0.07
CCM2-214ENST00000481194 ABCA1O95477 2261 aa14.59□□□□□ -0.07
CCM2-214ENST00000481194 CRLF1O75462 422 aa14.59□□□□□ -0.07
CCM2-214ENST00000481194 C14orf144Q96I85 54 aa14.59□□□□□ -0.07
CCM2-214ENST00000481194 SIGLEC8Q9NYZ4 499 aa14.59□□□□□ -0.07
CCM2-214ENST00000481194 TP53TG1Q9Y2A0 90 aa14.59□□□□□ -0.07
CCM2-214ENST00000481194 DNAL4O96015 105 aa14.59□□□□□ -0.07
CCM2-214ENST00000481194 SS18Q15532 418 aa14.59□□□□□ -0.07
CCM2-214ENST00000481194 ZNRF2Q8NHG8 242 aa14.59□□□□□ -0.07
CCM2-214ENST00000481194 TOMM7Q9P0U1 55 aa14.59□□□□□ -0.07
CCM2-214ENST00000481194 IGHV3-16A0A0C4DH30 117 aa14.58□□□□□ -0.07
CCM2-214ENST00000481194 SH2D6Q7Z4S9 175 aa14.58□□□□□ -0.07
CCM2-214ENST00000481194 SPART-AS1P0CW21 52 aa14.57□□□□□ -0.08
CCM2-214ENST00000481194 TRAV26-2A0A0B4J265 109 aa14.57□□□□□ -0.08
CCM2-214ENST00000481194 C10orf99Q6UWK7 81 aa14.57□□□□□ -0.08
CCM2-214ENST00000481194 PIFOQ8TCI5 191 aa14.57□□□□□ -0.08
CCM2-214ENST00000481194 SMAD5-AS1Q9Y6J3 95 aa14.57□□□□□ -0.08
CCM2-214ENST00000481194 SCGB1A1P11684 91 aa14.57□□□□□ -0.08
CCM2-214ENST00000481194 Q8N1Y9 231 aa14.56□□□□□ -0.08
CCM2-214ENST00000481194 PAX4O43316 350 aa14.56□□□□□ -0.08
CCM2-214ENST00000481194 Q6ZS46 218 aa14.56□□□□□ -0.08
CCM2-214ENST00000481194 NAV2Q8IVL1 2488 aa14.55□□□□□ -0.08
CCM2-214ENST00000481194 MLST8Q9BVC4 326 aa14.55□□□□□ -0.08
CCM2-214ENST00000481194 A0A1B0GV90 55 aa14.55□□□□□ -0.08
CCM2-214ENST00000481194 TMEM263Q8WUH6 116 aaKnown RBP14.55□□□□□ -0.08
CCM2-214ENST00000481194 IGHV1-24A0A0C4DH33 117 aa14.55□□□□□ -0.08
CCM2-214ENST00000481194 GTSF1Q8WW33 167 aa14.55□□□□□ -0.08
CCM2-214ENST00000481194 PMVKQ15126 192 aa14.55□□□□□ -0.08
CCM2-214ENST00000481194 OR13C6PQ8NH95 151 aa14.55□□□□□ -0.08
CCM2-214ENST00000481194 H3BMM0 161 aa14.54□□□□□ -0.08
CCM2-214ENST00000481194 APOMO95445 188 aa14.54□□□□□ -0.08
CCM2-214ENST00000481194 IGLV2-8P01709 118 aa14.54□□□□□ -0.08
CCM2-214ENST00000481194 TANC2Q9HCD6 1990 aa14.53□□□□□ -0.08
CCM2-214ENST00000481194 ZNF815PA8K554 130 aa14.53□□□□□ -0.08
CCM2-214ENST00000481194 K7EQD1 137 aa14.53□□□□□ -0.08
CCM2-214ENST00000481194 ATP5G1P05496 136 aa14.53□□□□□ -0.08
CCM2-214ENST00000481194 SMIM9A6NGZ8 99 aa14.52□□□□□ -0.08
CCM2-214ENST00000481194 HCFC1P51610 2035 aa14.52□□□□□ -0.08
CCM2-214ENST00000481194 NDUFAF3Q9BU61 184 aa14.52□□□□□ -0.08
CCM2-214ENST00000481194 TRAV8-2A0A0B4J237 113 aa14.52□□□□□ -0.09
CCM2-214ENST00000481194 C20orf173Q96LM9 149 aa14.52□□□□□ -0.09
CCM2-214ENST00000481194 SUMO4Q6EEV6 95 aa14.51□□□□□ -0.09
CCM2-214ENST00000481194 TMEM238C9JI98 176 aa14.51□□□□□ -0.09
CCM2-214ENST00000481194 ADAMTSL5Q6ZMM2 481 aa14.51□□□□□ -0.09
CCM2-214ENST00000481194 MTURNQ8N3F0 131 aa14.51□□□□□ -0.09
CCM2-214ENST00000481194 LGALS9BQ3B8N2 356 aa14.5□□□□□ -0.09
CCM2-214ENST00000481194 LGALS9CQ6DKI2 356 aa14.5□□□□□ -0.09
CCM2-214ENST00000481194 DAZ2Q13117 558 aaKnown RBP14.5□□□□□ -0.09
CCM2-214ENST00000481194 COA6Q5JTJ3 125 aaKnown RBP14.5□□□□□ -0.09
CCM2-214ENST00000481194 DAZ4Q86SG3 579 aaKnown RBP14.5□□□□□ -0.09
CCM2-214ENST00000481194 DAZ3Q9NR90 486 aaKnown RBP14.5□□□□□ -0.09
CCM2-214ENST00000481194 SPTBN4Q9H254 2564 aa14.49□□□□□ -0.09
CCM2-214ENST00000481194 SNAI2O43623 268 aa14.49□□□□□ -0.09
CCM2-214ENST00000481194 CKS1BP61024 79 aa14.49□□□□□ -0.09
CCM2-214ENST00000481194 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.49□□□□□ -0.09
CCM2-214ENST00000481194 TTC32Q5I0X7 151 aa14.49□□□□□ -0.09
CCM2-214ENST00000481194 IGKV3D-20A0A0C4DH25 116 aa14.49□□□□□ -0.09
CCM2-214ENST00000481194 Q8N2B8 174 aa14.49□□□□□ -0.09
CCM2-214ENST00000481194 MRGPRG-AS1Q2M3A8 158 aa14.48□□□□□ -0.09
CCM2-214ENST00000481194 CREBBPQ92793 2442 aa14.48□□□□□ -0.09
CCM2-214ENST00000481194 HSD52Q0P140 79 aa14.48□□□□□ -0.09
CCM2-214ENST00000481194 TIMM21Q9BVV7 248 aa14.48□□□□□ -0.09
CCM2-214ENST00000481194 RMI2Q96E14 147 aa14.48□□□□□ -0.09
CCM2-214ENST00000481194 SPCS1Q9Y6A9 102 aa14.48□□□□□ -0.09
CCM2-214ENST00000481194 RBMY1BA6NDE4 496 aaKnown RBP14.47□□□□□ -0.09
CCM2-214ENST00000481194 RBMY1EA6NEQ0 496 aaKnown RBP14.47□□□□□ -0.09
CCM2-214ENST00000481194 RBMY1DP0C7P1 496 aaKnown RBP14.47□□□□□ -0.09
CCM2-214ENST00000481194 RBMY1A1P0DJD3 496 aaKnown RBP14.47□□□□□ -0.09
CCM2-214ENST00000481194 RBMY1CP0DJD4 496 aa14.47□□□□□ -0.09
CCM2-214ENST00000481194 DEFB125Q8N687 156 aa14.47□□□□□ -0.09
CCM2-214ENST00000481194 SPANXA1Q9NS26 97 aa14.47□□□□□ -0.09
CCM2-214ENST00000481194 MYMXA0A1B0GTQ4 84 aa14.47□□□□□ -0.09
CCM2-214ENST00000481194 HIVEP3Q5T1R4 2406 aa14.47□□□□□ -0.09
CCM2-214ENST00000481194 SMR3AQ99954 134 aa14.47□□□□□ -0.09
CCM2-214ENST00000481194 MRPL23Q16540 153 aaKnown RBP14.46□□□□□ -0.09
CCM2-214ENST00000481194 ICOSQ9Y6W8 199 aa14.46□□□□□ -0.09
CCM2-214ENST00000481194 TRAV13-1A0A0B4J241 112 aa14.46□□□□□ -0.09
CCM2-214ENST00000481194 IGLC6P0CF74 106 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 163 ms