RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 ENY2Q9NPA8 101 aa2.7□□□□□ -1.98
UPF3A-207ENST00000481131 FKBP11Q9NYL4 201 aa2.7□□□□□ -1.98
UPF3A-207ENST00000481131 KLK9Q9UKQ9 250 aa2.7□□□□□ -1.98
UPF3A-207ENST00000481131 RAB19A4D1S5 217 aa2.69□□□□□ -1.98
UPF3A-207ENST00000481131 IZUMO1RA6ND01 250 aa2.69□□□□□ -1.98
UPF3A-207ENST00000481131 TGOLN2O43493 480 aa2.69□□□□□ -1.98
UPF3A-207ENST00000481131 SYNGR2O43760 224 aa2.69□□□□□ -1.98
UPF3A-207ENST00000481131 DHFRP00374 187 aa2.69□□□□□ -1.98
UPF3A-207ENST00000481131 IFNA10P01566 189 aa2.69□□□□□ -1.98
UPF3A-207ENST00000481131 IGKV1-17P01599 117 aa2.69□□□□□ -1.98
UPF3A-207ENST00000481131 IL5P05113 134 aa2.69□□□□□ -1.98
UPF3A-207ENST00000481131 CTSGP08311 255 aa2.69□□□□□ -1.98
UPF3A-207ENST00000481131 SLC25A6P12236 298 aa2.69□□□□□ -1.98
UPF3A-207ENST00000481131 HIST1H1BP16401 226 aaKnown RBP2.69□□□□□ -1.98
UPF3A-207ENST00000481131 SNCAP37840 140 aa2.69□□□□□ -1.98
UPF3A-207ENST00000481131 DEFA1P59665 94 aa2.69□□□□□ -1.98
UPF3A-207ENST00000481131 DEFA3P59666 94 aa2.69□□□□□ -1.98
UPF3A-207ENST00000481131 ERHP84090 104 aaKnown RBP2.69□□□□□ -1.98
UPF3A-207ENST00000481131 DEFA6Q01524 100 aa2.69□□□□□ -1.98
UPF3A-207ENST00000481131 Q56UQ5 140 aa2.69□□□□□ -1.98
UPF3A-207ENST00000481131 FAM231DQ6ZW35 169 aa2.69□□□□□ -1.98
UPF3A-207ENST00000481131 WFDC9Q8NEX5 89 aa2.69□□□□□ -1.98
UPF3A-207ENST00000481131 ACY3Q96HD9 319 aa2.69□□□□□ -1.98
UPF3A-207ENST00000481131 GSKIPQ9P0R6 139 aa2.69□□□□□ -1.98
UPF3A-207ENST00000481131 PAIP2BQ9ULR5 123 aaKnown RBP2.69□□□□□ -1.98
UPF3A-207ENST00000481131 LSM5Q9Y4Y9 91 aaKnown RBP2.69□□□□□ -1.98
UPF3A-207ENST00000481131 ALG5Q9Y673 324 aa2.69□□□□□ -1.98
UPF3A-207ENST00000481131 IGKV1D-37A0A075B6S9 117 aa2.68□□□□□ -1.98
UPF3A-207ENST00000481131 IGKV1OR2-108A0A075B7D4 117 aa2.68□□□□□ -1.98
UPF3A-207ENST00000481131 TRBV7-1A0A0A6YYK4 115 aa2.68□□□□□ -1.98
UPF3A-207ENST00000481131 TMEM213A2RRL7 107 aa2.68□□□□□ -1.98
UPF3A-207ENST00000481131 C2orf70A6NJV1 201 aa2.68□□□□□ -1.98
UPF3A-207ENST00000481131 K7EIL1 84 aa2.68□□□□□ -1.98
UPF3A-207ENST00000481131 K7EPK0 472 aa2.68□□□□□ -1.98
UPF3A-207ENST00000481131 SSNA1O43805 119 aa2.68□□□□□ -1.98
UPF3A-207ENST00000481131 GNG7O60262 68 aa2.68□□□□□ -1.98
UPF3A-207ENST00000481131 GGCTO75223 188 aaKnown RBP2.68□□□□□ -1.98
UPF3A-207ENST00000481131 IFNA21P01568 189 aa2.68□□□□□ -1.98
UPF3A-207ENST00000481131 RLN2P04090 185 aa2.68□□□□□ -1.98
UPF3A-207ENST00000481131 IFNA4P05014 189 aa2.68□□□□□ -1.98
UPF3A-207ENST00000481131 METTL15P1P0C7V9 234 aa2.68□□□□□ -1.98
UPF3A-207ENST00000481131 CXCL3P19876 107 aa2.68□□□□□ -1.98
UPF3A-207ENST00000481131 HTR2BP41595 481 aa2.68□□□□□ -1.98
UPF3A-207ENST00000481131 H2BFSP57053 126 aa2.68□□□□□ -1.98
UPF3A-207ENST00000481131 KRTAP10-1P60331 282 aa2.68□□□□□ -1.98
UPF3A-207ENST00000481131 S100A10P60903 97 aa2.68□□□□□ -1.98
UPF3A-207ENST00000481131 RRAS2P62070 204 aaPredicted RBP2.68□□□□□ -1.98
UPF3A-207ENST00000481131 IL15RAQ13261 267 aa2.68□□□□□ -1.98
UPF3A-207ENST00000481131 SPANXN5Q5MJ07 72 aa2.68□□□□□ -1.98
UPF3A-207ENST00000481131 ZNF436Q9C0F3 470 aaPredicted RBP2.68□□□□□ -1.98
UPF3A-207ENST00000481131 WFDC10AQ9H1F0 79 aa2.68□□□□□ -1.98
UPF3A-207ENST00000481131 C11orf1Q9H5F2 150 aa2.68□□□□□ -1.98
UPF3A-207ENST00000481131 PSENENQ9NZ42 101 aa2.68□□□□□ -1.98
UPF3A-207ENST00000481131 OR5AC2Q9NZP5 309 aa2.68□□□□□ -1.98
UPF3A-207ENST00000481131 COL7A1Q02388 2944 aa2.68□□□□□ -1.98
UPF3A-207ENST00000481131 LOC389332A0A1B0GUA5 103 aa2.67□□□□□ -1.98
UPF3A-207ENST00000481131 A0A1B0GW15 77 aa2.67□□□□□ -1.98
UPF3A-207ENST00000481131 IGSF23A1L1A6 192 aa2.67□□□□□ -1.98
UPF3A-207ENST00000481131 FAM24AA6NFZ4 105 aa2.67□□□□□ -1.98
UPF3A-207ENST00000481131 SNRPGP15A8MWD9 76 aa2.67□□□□□ -1.98
UPF3A-207ENST00000481131 A8MWP6 167 aa2.67□□□□□ -1.98
UPF3A-207ENST00000481131 CYB5BO43169 146 aa2.67□□□□□ -1.98
UPF3A-207ENST00000481131 IGLV1-51P01701 117 aa2.67□□□□□ -1.98
UPF3A-207ENST00000481131 IGLV7-43P04211 117 aa2.67□□□□□ -1.98
UPF3A-207ENST00000481131 IGLC1P0CG04 106 aa2.67□□□□□ -1.98
UPF3A-207ENST00000481131 OR10J1P30954 320 aa2.67□□□□□ -1.98
UPF3A-207ENST00000481131 ZNF90Q03938 601 aa2.67□□□□□ -1.98
UPF3A-207ENST00000481131 OR2F1Q13607 317 aa2.67□□□□□ -1.98
UPF3A-207ENST00000481131 RGS21Q2M5E4 152 aa2.67□□□□□ -1.98
UPF3A-207ENST00000481131 TOMM20LQ6UXN7 152 aa2.67□□□□□ -1.98
UPF3A-207ENST00000481131 TMEM14EPQ6UXP3 125 aa2.67□□□□□ -1.98
UPF3A-207ENST00000481131 GPHB5Q86YW7 130 aa2.67□□□□□ -1.98
UPF3A-207ENST00000481131 OR4X1Q8NH49 305 aa2.67□□□□□ -1.98
UPF3A-207ENST00000481131 RNASEH2CQ8TDP1 164 aaKnown RBP2.67□□□□□ -1.98
UPF3A-207ENST00000481131 C2orf50Q96LR7 162 aa2.67□□□□□ -1.98
UPF3A-207ENST00000481131 RBM12B-AS1Q9P1G2 102 aa2.67□□□□□ -1.98
UPF3A-207ENST00000481131 PUS1Q9Y606 427 aaKnown RBP eCLIP2.67□□□□□ -1.98
UPF3A-207ENST00000481131 U3KQ87 197 aa2.67□□□□□ -1.98
UPF3A-207ENST00000481131 TGP01266 2768 aa2.67□□□□□ -1.98
UPF3A-207ENST00000481131 TENM3Q9P273 2699 aa2.66□□□□□ -1.98
UPF3A-207ENST00000481131 IGKV3-7A0A075B6H7 116 aa2.66□□□□□ -1.98
UPF3A-207ENST00000481131 TRAV14DV4A0A0A6YYC5 116 aa2.66□□□□□ -1.98
UPF3A-207ENST00000481131 CORTO00230 105 aa2.66□□□□□ -1.98
UPF3A-207ENST00000481131 NDUFA4O00483 81 aa2.66□□□□□ -1.98
UPF3A-207ENST00000481131 TCAPO15273 167 aa2.66□□□□□ -1.98
UPF3A-207ENST00000481131 DEDDO75618 318 aa2.66□□□□□ -1.98
UPF3A-207ENST00000481131 CST7O76096 145 aa2.66□□□□□ -1.98
UPF3A-207ENST00000481131 CD7P09564 240 aa2.66□□□□□ -1.98
UPF3A-207ENST00000481131 PRB4P10163 310 aaPredicted RBP2.66□□□□□ -1.98
UPF3A-207ENST00000481131 SLC25A4P12235 298 aa2.66□□□□□ -1.98
UPF3A-207ENST00000481131 M6PRP20645 277 aa2.66□□□□□ -1.98
UPF3A-207ENST00000481131 CBLN1P23435 193 aa2.66□□□□□ -1.98
UPF3A-207ENST00000481131 AKR1C1Q04828 323 aa2.66□□□□□ -1.98
UPF3A-207ENST00000481131 SLC38A11Q08AI6 406 aa2.66□□□□□ -1.98
UPF3A-207ENST00000481131 USF2Q15853 346 aaPredicted RBP2.66□□□□□ -1.98
UPF3A-207ENST00000481131 DEFB114Q30KQ6 69 aa2.66□□□□□ -1.98
UPF3A-207ENST00000481131 Q5BKY6 102 aa2.66□□□□□ -1.98
UPF3A-207ENST00000481131 FA2HQ7L5A8 372 aa2.66□□□□□ -1.98
UPF3A-207ENST00000481131 DYNLRB2Q8TF09 96 aa2.66□□□□□ -1.98
UPF3A-207ENST00000481131 PPP1R1CQ8WVI7 109 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 478.1 ms