RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-238	ENST00000479894	NAGK	Q9UJ70	344 aa		10.94	□□□□□ -0.66
HDLBP-238	ENST00000479894	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	10.94	□□□□□ -0.66
HDLBP-238	ENST00000479894	LYRM9	A8MSI8	78 aa		10.93	□□□□□ -0.66
HDLBP-238	ENST00000479894	ZNF415	Q09FC8	603 aa		10.93	□□□□□ -0.66
HDLBP-238	ENST00000479894	TMEM241	Q24JQ0	296 aa		10.93	□□□□□ -0.66
HDLBP-238	ENST00000479894	SPX	Q9BT56	116 aa		10.93	□□□□□ -0.66
HDLBP-238	ENST00000479894	SH2D1A	O60880	128 aa		10.92	□□□□□ -0.66
HDLBP-238	ENST00000479894	RPS20	P60866	119 aa	Known RBP	10.92	□□□□□ -0.66
HDLBP-238	ENST00000479894	RNASE8	Q8TDE3	154 aa	Known RBP	10.92	□□□□□ -0.66
HDLBP-238	ENST00000479894	TP53TG3	Q9ULZ0	132 aa		10.92	□□□□□ -0.66
HDLBP-238	ENST00000479894	UBR4	Q5T4S7	5183 aa		10.91	□□□□□ -0.66
HDLBP-238	ENST00000479894	LINC00862	A6NCI5	91 aa		10.91	□□□□□ -0.66
HDLBP-238	ENST00000479894		B4DEV8	164 aa		10.91	□□□□□ -0.66
HDLBP-238	ENST00000479894	S100A4	P26447	101 aa	Known RBP	10.91	□□□□□ -0.66
HDLBP-238	ENST00000479894	ZNF80	P51504	273 aa	Predicted RBP	10.91	□□□□□ -0.66
HDLBP-238	ENST00000479894	DAZ2	Q13117	558 aa	Known RBP	10.91	□□□□□ -0.66
HDLBP-238	ENST00000479894	OR5I1	Q13606	314 aa		10.91	□□□□□ -0.66
HDLBP-238	ENST00000479894	LINC01559	Q495D7	138 aa		10.91	□□□□□ -0.66
HDLBP-238	ENST00000479894	MUC21	Q5SSG8	566 aa		10.91	□□□□□ -0.66
HDLBP-238	ENST00000479894	C15orf53	Q8NAA6	179 aa		10.91	□□□□□ -0.66
HDLBP-238	ENST00000479894	NHLRC2	Q8NBF2	726 aa		10.91	□□□□□ -0.66
HDLBP-238	ENST00000479894	NAT8	Q9UHE5	227 aa		10.91	□□□□□ -0.66
HDLBP-238	ENST00000479894	VPS13B	Q7Z7G8	4022 aa		10.91	□□□□□ -0.66
HDLBP-238	ENST00000479894		P01737	135 aa		10.9	□□□□□ -0.66
HDLBP-238	ENST00000479894	CXCL1	P09341	107 aa		10.9	□□□□□ -0.66
HDLBP-238	ENST00000479894	ASIP	P42127	132 aa		10.9	□□□□□ -0.66
HDLBP-238	ENST00000479894	EMP1	P54849	157 aa		10.9	□□□□□ -0.66
HDLBP-238	ENST00000479894	PRR27	Q6MZM9	219 aa		10.9	□□□□□ -0.66
HDLBP-238	ENST00000479894	OCC1	Q8TAD7	63 aa		10.9	□□□□□ -0.66
HDLBP-238	ENST00000479894	C18orf15	Q96N68	181 aa		10.9	□□□□□ -0.66
HDLBP-238	ENST00000479894	TRBV20OR9-2	A0A075B6H5	130 aa		10.89	□□□□□ -0.67
HDLBP-238	ENST00000479894	SFTA3	P0C7M3	94 aa		10.89	□□□□□ -0.67
HDLBP-238	ENST00000479894	TCL1A	P56279	114 aa		10.89	□□□□□ -0.67
HDLBP-238	ENST00000479894	COMMD7	Q86VX2	200 aa		10.89	□□□□□ -0.67
HDLBP-238	ENST00000479894	ZNRF2	Q8NHG8	242 aa		10.89	□□□□□ -0.67
HDLBP-238	ENST00000479894	DKK2	Q9UBU2	259 aa		10.89	□□□□□ -0.67
HDLBP-238	ENST00000479894	FAT1	Q14517	4588 aa		10.88	□□□□□ -0.67
HDLBP-238	ENST00000479894	KRBOX1	C9JBD0	128 aa		10.88	□□□□□ -0.67
HDLBP-238	ENST00000479894	IGLV2-8	P01709	118 aa		10.88	□□□□□ -0.67
HDLBP-238	ENST00000479894	AZU1	P20160	251 aa		10.88	□□□□□ -0.67
HDLBP-238	ENST00000479894	CRIP1	P50238	77 aa		10.88	□□□□□ -0.67
HDLBP-238	ENST00000479894	SRSF3	P84103	164 aa	Known RBP	10.88	□□□□□ -0.67
HDLBP-238	ENST00000479894	PNRC1	Q12796	327 aa	Predicted RBP	10.88	□□□□□ -0.67
HDLBP-238	ENST00000479894	DNLZ	Q5SXM8	178 aa		10.88	□□□□□ -0.67
HDLBP-238	ENST00000479894	TMEM88	Q6PEY1	159 aa		10.88	□□□□□ -0.67
HDLBP-238	ENST00000479894	C15orf54	Q8N8G6	183 aa		10.88	□□□□□ -0.67
HDLBP-238	ENST00000479894	IGHV3-16	A0A0C4DH30	117 aa		10.87	□□□□□ -0.67
HDLBP-238	ENST00000479894	TYMS	P04818	313 aa		10.87	□□□□□ -0.67
HDLBP-238	ENST00000479894	BTF3	P20290	206 aa	Known RBP	10.87	□□□□□ -0.67
HDLBP-238	ENST00000479894	KRTAP10-2	P60368	255 aa		10.87	□□□□□ -0.67
HDLBP-238	ENST00000479894	FAM222A	Q5U5X8	452 aa		10.87	□□□□□ -0.67
HDLBP-238	ENST00000479894		Q5VSD8	79 aa		10.87	□□□□□ -0.67
HDLBP-238	ENST00000479894	FAM231D	Q6ZW35	169 aa		10.87	□□□□□ -0.67
HDLBP-238	ENST00000479894	LINC01551	Q86U37	167 aa		10.87	□□□□□ -0.67
HDLBP-238	ENST00000479894	FRZB	Q92765	325 aa		10.87	□□□□□ -0.67
HDLBP-238	ENST00000479894	PTH2	Q96A98	100 aa		10.87	□□□□□ -0.67
HDLBP-238	ENST00000479894	NOP10	Q9NPE3	64 aa	Known RBP	10.87	□□□□□ -0.67
HDLBP-238	ENST00000479894	GSN-AS1	Q9NRJ2	163 aa		10.87	□□□□□ -0.67
HDLBP-238	ENST00000479894	C19orf71	A6NCJ1	209 aa		10.86	□□□□□ -0.67
HDLBP-238	ENST00000479894		C9JQL5	133 aa		10.86	□□□□□ -0.67
HDLBP-238	ENST00000479894		M0R036	132 aa		10.86	□□□□□ -0.67
HDLBP-238	ENST00000479894		M0R2P5	195 aa		10.86	□□□□□ -0.67
HDLBP-238	ENST00000479894	ERVFC1-1	P60608	527 aa		10.86	□□□□□ -0.67
HDLBP-238	ENST00000479894	DAD1	P61803	113 aa		10.86	□□□□□ -0.67
HDLBP-238	ENST00000479894	PIK3CD-AS1	Q5SR53	167 aa		10.86	□□□□□ -0.67
HDLBP-238	ENST00000479894	C11orf72	Q8NBR9	251 aa		10.86	□□□□□ -0.67
HDLBP-238	ENST00000479894	OR2D3	Q8NGH3	330 aa		10.86	□□□□□ -0.67
HDLBP-238	ENST00000479894	IL36B	Q9NZH7	164 aa		10.86	□□□□□ -0.67
HDLBP-238	ENST00000479894	IGKV3D-20	A0A0C4DH25	116 aa		10.85	□□□□□ -0.67
HDLBP-238	ENST00000479894		A0A1W2PPQ1	181 aa		10.85	□□□□□ -0.67
HDLBP-238	ENST00000479894	TMEM218	A2RU14	115 aa		10.85	□□□□□ -0.67
HDLBP-238	ENST00000479894	PGPEP1L	A6NFU8	196 aa		10.85	□□□□□ -0.67
HDLBP-238	ENST00000479894	GNRH2	O43555	120 aa		10.85	□□□□□ -0.67
HDLBP-238	ENST00000479894	NDUFA5	Q16718	116 aa		10.85	□□□□□ -0.67
HDLBP-238	ENST00000479894		Q6ZQT7	251 aa		10.85	□□□□□ -0.67
HDLBP-238	ENST00000479894	SYT8	Q8NBV8	401 aa		10.85	□□□□□ -0.67
HDLBP-238	ENST00000479894	RPP21	Q9H633	154 aa	Known RBP	10.85	□□□□□ -0.67
HDLBP-238	ENST00000479894	C11orf21	Q9P2W6	132 aa		10.85	□□□□□ -0.67
HDLBP-238	ENST00000479894	PLAC8L1	A1L4L8	177 aa		10.84	□□□□□ -0.67
HDLBP-238	ENST00000479894		A8MWL6	223 aa		10.84	□□□□□ -0.67
HDLBP-238	ENST00000479894		F2Z2F3	143 aa		10.84	□□□□□ -0.67
HDLBP-238	ENST00000479894	GATC	O43716	136 aa	Known RBP	10.84	□□□□□ -0.67
HDLBP-238	ENST00000479894	CIDEA	O60543	219 aa		10.84	□□□□□ -0.67
HDLBP-238	ENST00000479894	HTN3	P15516	51 aa		10.84	□□□□□ -0.67
HDLBP-238	ENST00000479894	ADIRF	Q15847	76 aa		10.84	□□□□□ -0.67
HDLBP-238	ENST00000479894	CT83	Q5H943	113 aa		10.84	□□□□□ -0.67
HDLBP-238	ENST00000479894	NUDT10	Q8NFP7	164 aa		10.84	□□□□□ -0.67
HDLBP-238	ENST00000479894	NUDT11	Q96G61	164 aa		10.84	□□□□□ -0.67
HDLBP-238	ENST00000479894	OSTC	Q9NRP0	149 aa		10.84	□□□□□ -0.67
HDLBP-238	ENST00000479894	MDFIC	Q9P1T7	246 aa		10.84	□□□□□ -0.67
HDLBP-238	ENST00000479894	PHLDA3	Q9Y5J5	127 aa		10.84	□□□□□ -0.67
HDLBP-238	ENST00000479894	TRGV2	A0A075B6R0	118 aa		10.83	□□□□□ -0.68
HDLBP-238	ENST00000479894	TRGV1	A0A0A0MS02	117 aa		10.83	□□□□□ -0.68
HDLBP-238	ENST00000479894		F8W036	122 aa		10.83	□□□□□ -0.68
HDLBP-238	ENST00000479894		K7EN84	100 aa		10.83	□□□□□ -0.68
HDLBP-238	ENST00000479894	PPP1R2P9	O14990	202 aa		10.83	□□□□□ -0.68
HDLBP-238	ENST00000479894	SPINK4	O60575	86 aa		10.83	□□□□□ -0.68
HDLBP-238	ENST00000479894	PRM2	P04554	102 aa		10.83	□□□□□ -0.68
HDLBP-238	ENST00000479894	XG	P55808	180 aa		10.83	□□□□□ -0.68
HDLBP-238	ENST00000479894	RASL10A	Q92737	203 aa		10.83	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms