RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 AQP10Q96PS8 301 aa1.67□□□□□ -2.14
SMARCA1-204ENST00000478420 FREM3P0C091 2139 aa1.67□□□□□ -2.14
SMARCA1-204ENST00000478420 AKAP12Q02952 1782 aa1.67□□□□□ -2.14
SMARCA1-204ENST00000478420 GPR98Q8WXG9 6306 aa1.67□□□□□ -2.14
SMARCA1-204ENST00000478420 RP1P56715 2156 aa1.66□□□□□ -2.14
SMARCA1-204ENST00000478420 TRBV6-8A0A0A6YYG3 113 aa1.66□□□□□ -2.14
SMARCA1-204ENST00000478420 RBAKDNA6NC62 111 aa1.66□□□□□ -2.14
SMARCA1-204ENST00000478420 FAM24AA6NFZ4 105 aa1.66□□□□□ -2.14
SMARCA1-204ENST00000478420 F8W1H4 67 aa1.66□□□□□ -2.14
SMARCA1-204ENST00000478420 H3BRN7 92 aa1.66□□□□□ -2.14
SMARCA1-204ENST00000478420 CCL16O15467 120 aa1.66□□□□□ -2.14
SMARCA1-204ENST00000478420 IGKCP01834 107 aa1.66□□□□□ -2.14
SMARCA1-204ENST00000478420 MT-ATP8P03928 68 aa1.66□□□□□ -2.14
SMARCA1-204ENST00000478420 TFF1P04155 84 aa1.66□□□□□ -2.14
SMARCA1-204ENST00000478420 SLC25A6P12236 298 aa1.66□□□□□ -2.14
SMARCA1-204ENST00000478420 COX7CP15954 63 aa1.66□□□□□ -2.14
SMARCA1-204ENST00000478420 UBE2G1P62253 170 aa1.66□□□□□ -2.14
SMARCA1-204ENST00000478420 SBSPONQ8IVN8 264 aa1.66□□□□□ -2.14
SMARCA1-204ENST00000478420 OR10AG1Q8NH19 301 aa1.66□□□□□ -2.14
SMARCA1-204ENST00000478420 PATE1Q8WXA2 126 aa1.66□□□□□ -2.14
SMARCA1-204ENST00000478420 LINC00052Q96N35 136 aa1.66□□□□□ -2.14
SMARCA1-204ENST00000478420 DPH3P1Q9H4G8 78 aa1.66□□□□□ -2.14
SMARCA1-204ENST00000478420 LINC00312Q9Y6C7 94 aa1.66□□□□□ -2.14
SMARCA1-204ENST00000478420 V9GYS6 101 aa1.66□□□□□ -2.14
SMARCA1-204ENST00000478420 ROBO1Q9Y6N7 1651 aa1.66□□□□□ -2.14
SMARCA1-204ENST00000478420 LAMB4A4D0S4 1761 aa1.66□□□□□ -2.14
SMARCA1-204ENST00000478420 CASZ1Q86V15 1759 aa1.66□□□□□ -2.14
SMARCA1-204ENST00000478420 MCM3APO60318 1980 aa1.66□□□□□ -2.14
SMARCA1-204ENST00000478420 BRWD1Q9NSI6 2320 aa1.66□□□□□ -2.14
SMARCA1-204ENST00000478420 SNRNP200O75643 2136 aaKnown RBP1.66□□□□□ -2.14
SMARCA1-204ENST00000478420 PRDM2Q13029 1718 aa1.66□□□□□ -2.14
SMARCA1-204ENST00000478420 SPHKAPQ2M3C7 1700 aa1.66□□□□□ -2.14
SMARCA1-204ENST00000478420 CASKIN1Q8WXD9 1431 aa1.66□□□□□ -2.14
SMARCA1-204ENST00000478420 MED14O60244 1454 aa1.65□□□□□ -2.15
SMARCA1-204ENST00000478420 TEX14Q8IWB6 1497 aa1.65□□□□□ -2.15
SMARCA1-204ENST00000478420 CXorf51AA0A1B0GTR3 108 aa1.65□□□□□ -2.15
SMARCA1-204ENST00000478420 IGHV3-33P01772 117 aa1.65□□□□□ -2.15
SMARCA1-204ENST00000478420 IL7P13232 177 aa1.65□□□□□ -2.15
SMARCA1-204ENST00000478420 POLR2JP52435 117 aaKnown RBP1.65□□□□□ -2.15
SMARCA1-204ENST00000478420 SLC48A1Q6P1K1 146 aa1.65□□□□□ -2.15
SMARCA1-204ENST00000478420 CSAG1Q6PB30 78 aa1.65□□□□□ -2.15
SMARCA1-204ENST00000478420 C5orf38Q86SI9 138 aa1.65□□□□□ -2.15
SMARCA1-204ENST00000478420 ZNF431Q8TF32 576 aaPredicted RBP1.65□□□□□ -2.15
SMARCA1-204ENST00000478420 PPDPFLQ8WWR9 84 aa1.65□□□□□ -2.15
SMARCA1-204ENST00000478420 DPY30Q9C005 99 aa1.65□□□□□ -2.15
SMARCA1-204ENST00000478420 Q9H521 79 aa1.65□□□□□ -2.15
SMARCA1-204ENST00000478420 TMEM106BQ9NUM4 274 aa1.65□□□□□ -2.15
SMARCA1-204ENST00000478420 ANKRD26Q9UPS8 1709 aa1.65□□□□□ -2.15
SMARCA1-204ENST00000478420 CC2D2AQ9P2K1 1620 aa1.65□□□□□ -2.15
SMARCA1-204ENST00000478420 CPSF1Q10570 1443 aaKnown RBP1.65□□□□□ -2.15
SMARCA1-204ENST00000478420 NSD3Q9BZ95 1437 aa1.65□□□□□ -2.15
SMARCA1-204ENST00000478420 COL11A1P12107 1806 aaPredicted RBP1.64□□□□□ -2.15
SMARCA1-204ENST00000478420 TRGV4A0A0C4DH28 118 aa1.64□□□□□ -2.15
SMARCA1-204ENST00000478420 RNASE3P12724 160 aaKnown RBP1.64□□□□□ -2.15
SMARCA1-204ENST00000478420 CBLN1P23435 193 aa1.64□□□□□ -2.15
SMARCA1-204ENST00000478420 RHOHQ15669 191 aa1.64□□□□□ -2.15
SMARCA1-204ENST00000478420 SPRNQ5BIV9 151 aa1.64□□□□□ -2.15
SMARCA1-204ENST00000478420 C9orf116Q5BN46 136 aaPredicted RBP1.64□□□□□ -2.15
SMARCA1-204ENST00000478420 LYPD5Q6UWN5 251 aa1.64□□□□□ -2.15
SMARCA1-204ENST00000478420 LIMD2Q9BT23 127 aa1.64□□□□□ -2.15
SMARCA1-204ENST00000478420 TTTY12Q9BZ98 90 aa1.64□□□□□ -2.15
SMARCA1-204ENST00000478420 ORMDL1Q9P0S3 153 aa1.64□□□□□ -2.15
SMARCA1-204ENST00000478420 ARHGAP5Q13017 1502 aa1.64□□□□□ -2.15
SMARCA1-204ENST00000478420 ABCC5O15440 1437 aa1.64□□□□□ -2.15
SMARCA1-204ENST00000478420 DAPK1P53355 1430 aa1.64□□□□□ -2.15
SMARCA1-204ENST00000478420 C10orf71Q711Q0 1435 aa1.64□□□□□ -2.15
SMARCA1-204ENST00000478420 MICAL3Q7RTP6 2002 aa1.64□□□□□ -2.15
SMARCA1-204ENST00000478420 KIAA1549LQ6ZVL6 1849 aa1.63□□□□□ -2.15
SMARCA1-204ENST00000478420 UBE2L5PA0A1B0GUS4 154 aa1.63□□□□□ -2.15
SMARCA1-204ENST00000478420 TMEM30CPA0ZSE6 113 aa1.63□□□□□ -2.15
SMARCA1-204ENST00000478420 SNCAP37840 140 aa1.63□□□□□ -2.15
SMARCA1-204ENST00000478420 UBE2L3P68036 154 aaKnown RBP1.63□□□□□ -2.15
SMARCA1-204ENST00000478420 DCDP81605 110 aaKnown RBP1.63□□□□□ -2.15
SMARCA1-204ENST00000478420 IQCJQ1A5X6 159 aa1.63□□□□□ -2.15
SMARCA1-204ENST00000478420 C10orf55Q5SWW7 151 aa1.63□□□□□ -2.15
SMARCA1-204ENST00000478420 C4orf3Q8WVX3 66 aa1.63□□□□□ -2.15
SMARCA1-204ENST00000478420 C10orf82Q8WW14 230 aa1.63□□□□□ -2.15
SMARCA1-204ENST00000478420 VAMP8Q9BV40 100 aa1.63□□□□□ -2.15
SMARCA1-204ENST00000478420 SCP2D1Q9UJQ7 156 aa1.63□□□□□ -2.15
SMARCA1-204ENST00000478420 LTBP2Q14767 1821 aa1.63□□□□□ -2.15
SMARCA1-204ENST00000478420 EML5Q05BV3 1969 aa1.63□□□□□ -2.15
SMARCA1-204ENST00000478420 MED12LQ86YW9 2145 aa1.63□□□□□ -2.15
SMARCA1-204ENST00000478420 MAGI1Q96QZ7 1491 aaPredicted RBP1.63□□□□□ -2.15
SMARCA1-204ENST00000478420 IFT140Q96RY7 1462 aa1.63□□□□□ -2.15
SMARCA1-204ENST00000478420 LAMB2P55268 1798 aa1.62□□□□□ -2.15
SMARCA1-204ENST00000478420 RBBP6Q7Z6E9 1792 aaKnown RBP1.62□□□□□ -2.15
SMARCA1-204ENST00000478420 IGLC1P0CG04 106 aa1.62□□□□□ -2.15
SMARCA1-204ENST00000478420 PYY3Q5JQD4 70 aa1.62□□□□□ -2.15
SMARCA1-204ENST00000478420 RPL7L1Q6DKI1 246 aaKnown RBP1.62□□□□□ -2.15
SMARCA1-204ENST00000478420 UNQ5815/PRO19632Q6UWF5 114 aa1.62□□□□□ -2.15
SMARCA1-204ENST00000478420 COMMD6Q7Z4G1 85 aa1.62□□□□□ -2.15
SMARCA1-204ENST00000478420 SPTSSBQ8NFR3 76 aa1.62□□□□□ -2.15
SMARCA1-204ENST00000478420 ODF3Q96PU9 254 aa1.62□□□□□ -2.15
SMARCA1-204ENST00000478420 TXNDC17Q9BRA2 123 aa1.62□□□□□ -2.15
SMARCA1-204ENST00000478420 PRO1933Q9H354 126 aa1.62□□□□□ -2.15
SMARCA1-204ENST00000478420 AP4S1Q9Y587 144 aa1.62□□□□□ -2.15
SMARCA1-204ENST00000478420 ERCC6L2Q5T890 1561 aa1.62□□□□□ -2.15
SMARCA1-204ENST00000478420 PLXNA4Q9HCM2 1894 aa1.62□□□□□ -2.15
SMARCA1-204ENST00000478420 FYCO1Q9BQS8 1478 aa1.62□□□□□ -2.15
SMARCA1-204ENST00000478420 FBN1P35555 2871 aaKnown RBP1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms