RNA–Protein interactions for RNA: ENST00000476742.1

NPHP3-207, Transcript of nephrocystin 3, humanhuman

TSL 3

Gene NPHP3, Length 650 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-207ENST00000476742 CPSF1Q10570 1443 aaKnown RBP0.89□□□□□ -2.27
NPHP3-207ENST00000476742 SCN8AQ9UQD0 1980 aa0.88□□□□□ -2.27
NPHP3-207ENST00000476742 KDM5AP29375 1690 aaKnown RBP0.88□□□□□ -2.27
NPHP3-207ENST00000476742 MED1Q15648 1581 aaPredicted RBP0.88□□□□□ -2.27
NPHP3-207ENST00000476742 GAPVD1Q14C86 1478 aa0.88□□□□□ -2.27
NPHP3-207ENST00000476742 PLEKHH2Q8IVE3 1493 aa0.88□□□□□ -2.27
NPHP3-207ENST00000476742 TRPM6Q9BX84 2022 aa0.88□□□□□ -2.27
NPHP3-207ENST00000476742 ATG2AQ2TAZ0 1938 aa0.88□□□□□ -2.27
NPHP3-207ENST00000476742 KIF20BQ96Q89 1820 aa0.88□□□□□ -2.27
NPHP3-207ENST00000476742 TRAV7A0A075B6U4 112 aa0.88□□□□□ -2.27
NPHP3-207ENST00000476742 TRAV2A0A0B4J234 112 aa0.88□□□□□ -2.27
NPHP3-207ENST00000476742 TRBV10-2A0A0K0K1G8 114 aa0.88□□□□□ -2.27
NPHP3-207ENST00000476742 A0A1W2PPM0 123 aa0.88□□□□□ -2.27
NPHP3-207ENST00000476742 RBAKDNA6NC62 111 aa0.88□□□□□ -2.27
NPHP3-207ENST00000476742 HMSDA8MTL9 139 aa0.88□□□□□ -2.27
NPHP3-207ENST00000476742 H7C2G1 150 aa0.88□□□□□ -2.27
NPHP3-207ENST00000476742 ZNF737O75373 536 aa0.88□□□□□ -2.27
NPHP3-207ENST00000476742 CFDP00746 253 aaPredicted RBP0.88□□□□□ -2.27
NPHP3-207ENST00000476742 CRPP02741 224 aa0.88□□□□□ -2.27
NPHP3-207ENST00000476742 ACYP1P07311 99 aa0.88□□□□□ -2.27
NPHP3-207ENST00000476742 NMBP08949 121 aa0.88□□□□□ -2.27
NPHP3-207ENST00000476742 PIRTP0C851 137 aa0.88□□□□□ -2.27
NPHP3-207ENST00000476742 SMIM13P0DJ93 91 aa0.88□□□□□ -2.27
NPHP3-207ENST00000476742 MGST1P10620 155 aaKnown RBP0.88□□□□□ -2.27
NPHP3-207ENST00000476742 CCL4P13236 92 aa0.88□□□□□ -2.27
NPHP3-207ENST00000476742 SSR2P43308 183 aa0.88□□□□□ -2.27
NPHP3-207ENST00000476742 XCL1P47992 114 aa0.88□□□□□ -2.27
NPHP3-207ENST00000476742 GNG11P61952 73 aa0.88□□□□□ -2.27
NPHP3-207ENST00000476742 UBE2G1P62253 170 aa0.88□□□□□ -2.27
NPHP3-207ENST00000476742 SUPT4H1P63272 117 aaKnown RBP0.88□□□□□ -2.27
NPHP3-207ENST00000476742 RBM3P98179 157 aaKnown RBP0.88□□□□□ -2.27
NPHP3-207ENST00000476742 ESRGQ1W209 222 aa0.88□□□□□ -2.27
NPHP3-207ENST00000476742 SPATA45Q537H7 98 aa0.88□□□□□ -2.27
NPHP3-207ENST00000476742 Q5BKY6 102 aa0.88□□□□□ -2.27
NPHP3-207ENST00000476742 S100A7L2Q5SY68 101 aa0.88□□□□□ -2.27
NPHP3-207ENST00000476742 CASC2Q6XLA1 102 aa0.88□□□□□ -2.27
NPHP3-207ENST00000476742 SMIM5Q71RC9 77 aa0.88□□□□□ -2.27
NPHP3-207ENST00000476742 COMMD6Q7Z4G1 85 aa0.88□□□□□ -2.27
NPHP3-207ENST00000476742 SBSPONQ8IVN8 264 aa0.88□□□□□ -2.27
NPHP3-207ENST00000476742 C3orf56Q8N813 242 aa0.88□□□□□ -2.27
NPHP3-207ENST00000476742 LINC00301Q8NCQ3 95 aa0.88□□□□□ -2.27
NPHP3-207ENST00000476742 OR8B3Q8NGG8 313 aa0.88□□□□□ -2.27
NPHP3-207ENST00000476742 TMEM254Q8TBM7 123 aa0.88□□□□□ -2.27
NPHP3-207ENST00000476742 LSM10Q969L4 123 aaKnown RBP0.88□□□□□ -2.27
NPHP3-207ENST00000476742 MUCL1Q96DR8 90 aa0.88□□□□□ -2.27
NPHP3-207ENST00000476742 TMEM141Q96I45 108 aa0.88□□□□□ -2.27
NPHP3-207ENST00000476742 RETNLBQ9BQ08 111 aa0.88□□□□□ -2.27
NPHP3-207ENST00000476742 SLC50A1Q9BRV3 221 aa0.88□□□□□ -2.27
NPHP3-207ENST00000476742 UPK3BQ9BT76 320 aa0.88□□□□□ -2.27
NPHP3-207ENST00000476742 C16orf95Q9H693 158 aa0.88□□□□□ -2.27
NPHP3-207ENST00000476742 NXT2Q9NPJ8 142 aaKnown RBP0.88□□□□□ -2.27
NPHP3-207ENST00000476742 C14orf132Q9NPU4 83 aa0.88□□□□□ -2.27
NPHP3-207ENST00000476742 SMARCA4P51532 1647 aa0.88□□□□□ -2.27
NPHP3-207ENST00000476742 SCN9AQ15858 1988 aa0.88□□□□□ -2.27
NPHP3-207ENST00000476742 ABCC3O15438 1527 aa0.88□□□□□ -2.27
NPHP3-207ENST00000476742 ANKRD31Q8N7Z5 1873 aa0.88□□□□□ -2.27
NPHP3-207ENST00000476742 RIC1Q4ADV7 1423 aa0.88□□□□□ -2.27
NPHP3-207ENST00000476742 ANKARQ7Z5J8 1434 aa0.88□□□□□ -2.27
NPHP3-207ENST00000476742 POLEQ07864 2286 aa0.87□□□□□ -2.27
NPHP3-207ENST00000476742 DENND4CQ5VZ89 1909 aa0.87□□□□□ -2.27
NPHP3-207ENST00000476742 DNMBPQ6XZF7 1577 aa0.87□□□□□ -2.27
NPHP3-207ENST00000476742 KIF13AQ9H1H9 1805 aa0.87□□□□□ -2.27
NPHP3-207ENST00000476742 CCDC88BA6NC98 1476 aa0.87□□□□□ -2.27
NPHP3-207ENST00000476742 COL1A1P02452 1464 aaPredicted RBP0.87□□□□□ -2.27
NPHP3-207ENST00000476742 ERVK-7P63135 1459 aa0.87□□□□□ -2.27
NPHP3-207ENST00000476742 HECW1Q76N89 1606 aa0.87□□□□□ -2.27
NPHP3-207ENST00000476742 NUP210LQ5VU65 1888 aa0.87□□□□□ -2.27
NPHP3-207ENST00000476742 MYO5AQ9Y4I1 1855 aaKnown RBP0.87□□□□□ -2.27
NPHP3-207ENST00000476742 TRGV2A0A075B6R0 118 aa0.87□□□□□ -2.27
NPHP3-207ENST00000476742 A0A087WWC5 75 aa0.87□□□□□ -2.27
NPHP3-207ENST00000476742 TRAV14DV4A0A0A6YYC5 116 aa0.87□□□□□ -2.27
NPHP3-207ENST00000476742 IGHV3-15A0A0B4J1V0 119 aa0.87□□□□□ -2.27
NPHP3-207ENST00000476742 TRAV1-1A0A0B4J248 108 aa0.87□□□□□ -2.27
NPHP3-207ENST00000476742 TRAV17A0A0B4J275 112 aa0.87□□□□□ -2.27
NPHP3-207ENST00000476742 MDFIC2A0A1B0GVS7 189 aa0.87□□□□□ -2.27
NPHP3-207ENST00000476742 hADV29S1A0JD25 119 aa0.87□□□□□ -2.27
NPHP3-207ENST00000476742 CRYM-AS1A6NIL9 109 aa0.87□□□□□ -2.27
NPHP3-207ENST00000476742 UMAD1C9J7I0 102 aa0.87□□□□□ -2.27
NPHP3-207ENST00000476742 H3BUT2 72 aa0.87□□□□□ -2.27
NPHP3-207ENST00000476742 GNRH2O43555 120 aa0.87□□□□□ -2.27
NPHP3-207ENST00000476742 BAALC-AS2P0C853 105 aa0.87□□□□□ -2.27
NPHP3-207ENST00000476742 IGLC2P0DOY2 106 aa0.87□□□□□ -2.27
NPHP3-207ENST00000476742 IGLC3P0DOY3 106 aa0.87□□□□□ -2.27
NPHP3-207ENST00000476742 CCL5P13501 91 aa0.87□□□□□ -2.27
NPHP3-207ENST00000476742 SNRPFP62306 86 aaKnown RBP0.87□□□□□ -2.27
NPHP3-207ENST00000476742 TDRG1Q3Y452 100 aa0.87□□□□□ -2.27
NPHP3-207ENST00000476742 ETDBQ3ZM63 59 aa0.87□□□□□ -2.27
NPHP3-207ENST00000476742 NMSQ5H8A3 153 aa0.87□□□□□ -2.27
NPHP3-207ENST00000476742 PSMG4Q5JS54 123 aa0.87□□□□□ -2.27
NPHP3-207ENST00000476742 C2orf82Q6UX34 121 aa0.87□□□□□ -2.27
NPHP3-207ENST00000476742 PATE2Q6UY27 113 aa0.87□□□□□ -2.27
NPHP3-207ENST00000476742 HEPN1Q6WQI6 88 aa0.87□□□□□ -2.27
NPHP3-207ENST00000476742 C2orf91Q6ZV80 131 aa0.87□□□□□ -2.27
NPHP3-207ENST00000476742 ARPINQ7Z6K5 226 aa0.87□□□□□ -2.27
NPHP3-207ENST00000476742 DYNAPQ8N1N2 210 aa0.87□□□□□ -2.27
NPHP3-207ENST00000476742 LINC00269Q8N2A0 174 aa0.87□□□□□ -2.27
NPHP3-207ENST00000476742 SERP2Q8N6R1 65 aa0.87□□□□□ -2.27
NPHP3-207ENST00000476742 CCL4L1Q8NHW4 92 aa0.87□□□□□ -2.27
NPHP3-207ENST00000476742 DSCR8Q96T75 97 aa0.87□□□□□ -2.27
NPHP3-207ENST00000476742 C20orf78Q9BR46 151 aa0.87□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms