RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 MUC21A0A0G2JKD1 596 aa12.91□□□□□ -0.34
HSPG2-208ENST00000471322 MUC21A0A140T8X8 626 aa12.91□□□□□ -0.34
HSPG2-208ENST00000471322 H3BMM0 161 aa12.91□□□□□ -0.34
HSPG2-208ENST00000471322 SSTP61278 116 aa12.91□□□□□ -0.34
HSPG2-208ENST00000471322 MUC21Q5SSG8 566 aa12.91□□□□□ -0.34
HSPG2-208ENST00000471322 AMTNQ6UX39 209 aa12.91□□□□□ -0.34
HSPG2-208ENST00000471322 C12orf57Q99622 126 aa12.91□□□□□ -0.34
HSPG2-208ENST00000471322 TGP01266 2768 aa12.91□□□□□ -0.34
HSPG2-208ENST00000471322 NUPR1O60356 82 aa12.91□□□□□ -0.34
HSPG2-208ENST00000471322 ZNF324O75467 553 aaPredicted RBP12.91□□□□□ -0.34
HSPG2-208ENST00000471322 IGKV3-20P01619 116 aa12.91□□□□□ -0.34
HSPG2-208ENST00000471322 LINC00310P59036 64 aa12.91□□□□□ -0.34
HSPG2-208ENST00000471322 KIR3DS1Q14943 382 aa12.91□□□□□ -0.34
HSPG2-208ENST00000471322 TDRG1Q3Y452 100 aa12.91□□□□□ -0.34
HSPG2-208ENST00000471322 SPANXN1Q5VSR9 72 aa12.91□□□□□ -0.34
HSPG2-208ENST00000471322 CLUHP3Q96NS8 147 aa12.91□□□□□ -0.34
HSPG2-208ENST00000471322 SAMD10Q9BYL1 202 aa12.91□□□□□ -0.34
HSPG2-208ENST00000471322 TRAV12-3A0A0B4J271 114 aa12.9□□□□□ -0.34
HSPG2-208ENST00000471322 KNCNA6PVL3 124 aa12.9□□□□□ -0.34
HSPG2-208ENST00000471322 U3KQK5 164 aa12.9□□□□□ -0.34
HSPG2-208ENST00000471322 H3BVH4 76 aa12.89□□□□□ -0.35
HSPG2-208ENST00000471322 PPBPP02775 128 aa12.89□□□□□ -0.35
HSPG2-208ENST00000471322 EGFEM1PQ0D2K5 195 aa12.89□□□□□ -0.35
HSPG2-208ENST00000471322 AMN1Q8IY45 258 aa12.89□□□□□ -0.35
HSPG2-208ENST00000471322 ORMDL3Q8N138 153 aa12.89□□□□□ -0.35
HSPG2-208ENST00000471322 OR10AG1Q8NH19 301 aa12.89□□□□□ -0.35
HSPG2-208ENST00000471322 SCRT2Q9NQ03 307 aa12.89□□□□□ -0.35
HSPG2-208ENST00000471322 IQCJQ1A5X6 159 aa12.88□□□□□ -0.35
HSPG2-208ENST00000471322 SPINK13Q1W4C9 94 aa12.88□□□□□ -0.35
HSPG2-208ENST00000471322 CHCHD1Q96BP2 118 aaKnown RBP12.88□□□□□ -0.35
HSPG2-208ENST00000471322 RCHY1Q96PM5 261 aa12.88□□□□□ -0.35
HSPG2-208ENST00000471322 MSRB1Q9NZV6 116 aa12.88□□□□□ -0.35
HSPG2-208ENST00000471322 PHLDA3Q9Y5J5 127 aa12.88□□□□□ -0.35
HSPG2-208ENST00000471322 M0R2Z0 102 aa12.88□□□□□ -0.35
HSPG2-208ENST00000471322 IGLV1-51P01701 117 aa12.88□□□□□ -0.35
HSPG2-208ENST00000471322 MRPL51Q4U2R6 128 aaKnown RBP12.88□□□□□ -0.35
HSPG2-208ENST00000471322 NIT1Q86X76 327 aa12.88□□□□□ -0.35
HSPG2-208ENST00000471322 SORL1Q92673 2214 aa12.87□□□□□ -0.35
HSPG2-208ENST00000471322 OR11H12B2RN74 326 aa12.87□□□□□ -0.35
HSPG2-208ENST00000471322 WIPF1O43516 503 aa12.87□□□□□ -0.35
HSPG2-208ENST00000471322 GNRH2O43555 120 aa12.87□□□□□ -0.35
HSPG2-208ENST00000471322 CKS2P33552 79 aa12.87□□□□□ -0.35
HSPG2-208ENST00000471322 TRAV12-2A0A075B6T6 113 aa12.86□□□□□ -0.35
HSPG2-208ENST00000471322 IGHV1OR15-1A0A075B7D0 117 aa12.86□□□□□ -0.35
HSPG2-208ENST00000471322 D6R8Y8 96 aa12.86□□□□□ -0.35
HSPG2-208ENST00000471322 HSBP1O75506 76 aa12.86□□□□□ -0.35
HSPG2-208ENST00000471322 RAB4AP20338 218 aa12.86□□□□□ -0.35
HSPG2-208ENST00000471322 INSL3P51460 131 aa12.86□□□□□ -0.35
HSPG2-208ENST00000471322 PRELID3AQ96N28 172 aa12.86□□□□□ -0.35
HSPG2-208ENST00000471322 FAM110AQ9BQ89 295 aa12.86□□□□□ -0.35
HSPG2-208ENST00000471322 LAMTOR2Q9Y2Q5 125 aa12.86□□□□□ -0.35
HSPG2-208ENST00000471322 TIMM8BQ9Y5J9 83 aaPredicted RBP12.86□□□□□ -0.35
HSPG2-208ENST00000471322 CD7P09564 240 aa12.85□□□□□ -0.35
HSPG2-208ENST00000471322 LINC00614P0C842 121 aa12.85□□□□□ -0.35
HSPG2-208ENST00000471322 AMTP48728 403 aa12.85□□□□□ -0.35
HSPG2-208ENST00000471322 JOSD1Q15040 202 aaPredicted RBP12.85□□□□□ -0.35
HSPG2-208ENST00000471322 ODF3L2Q3SX64 289 aa12.85□□□□□ -0.35
HSPG2-208ENST00000471322 PYY3Q5JQD4 70 aa12.85□□□□□ -0.35
HSPG2-208ENST00000471322 RNASEKQ6P5S7 137 aaKnown RBP12.85□□□□□ -0.35
HSPG2-208ENST00000471322 RNASE3P12724 160 aaKnown RBP12.84□□□□□ -0.35
HSPG2-208ENST00000471322 PMCHP20382 165 aa12.84□□□□□ -0.35
HSPG2-208ENST00000471322 RNF185Q96GF1 192 aa12.84□□□□□ -0.35
HSPG2-208ENST00000471322 K7EIL1 84 aa12.84□□□□□ -0.35
HSPG2-208ENST00000471322 MRAPQ8TCY5 172 aa12.84□□□□□ -0.35
HSPG2-208ENST00000471322 C20orf144Q9BQM9 153 aa12.84□□□□□ -0.35
HSPG2-208ENST00000471322 TRGV11A0A075B6L2 103 aa12.83□□□□□ -0.36
HSPG2-208ENST00000471322 NXPH4O95158 308 aa12.83□□□□□ -0.36
HSPG2-208ENST00000471322 EVI2AP22794 236 aa12.83□□□□□ -0.36
HSPG2-208ENST00000471322 DEFB121Q5J5C9 76 aa12.83□□□□□ -0.36
HSPG2-208ENST00000471322 STHQ8IWL8 128 aa12.83□□□□□ -0.36
HSPG2-208ENST00000471322 IGHV3-16A0A0C4DH30 117 aa12.82□□□□□ -0.36
HSPG2-208ENST00000471322 M0R381 172 aa12.82□□□□□ -0.36
HSPG2-208ENST00000471322 ZNF124Q15973 351 aa12.82□□□□□ -0.36
HSPG2-208ENST00000471322 PRSS3P2Q8NHM4 247 aa12.82□□□□□ -0.36
HSPG2-208ENST00000471322 NIT2Q9NQR4 276 aa12.82□□□□□ -0.36
HSPG2-208ENST00000471322 RBMY1BA6NDE4 496 aaKnown RBP12.81□□□□□ -0.36
HSPG2-208ENST00000471322 RBMY1EA6NEQ0 496 aaKnown RBP12.81□□□□□ -0.36
HSPG2-208ENST00000471322 CRXO43186 299 aaPredicted RBP12.81□□□□□ -0.36
HSPG2-208ENST00000471322 RBMY1DP0C7P1 496 aaKnown RBP12.81□□□□□ -0.36
HSPG2-208ENST00000471322 MRAP2Q96G30 205 aa12.81□□□□□ -0.36
HSPG2-208ENST00000471322 AP1S3Q96PC3 154 aa12.81□□□□□ -0.36
HSPG2-208ENST00000471322 NUTF2P61970 127 aaKnown RBP12.8□□□□□ -0.36
HSPG2-208ENST00000471322 FA2HQ7L5A8 372 aa12.8□□□□□ -0.36
HSPG2-208ENST00000471322 Q8N1Y9 231 aa12.8□□□□□ -0.36
HSPG2-208ENST00000471322 SYT8Q8NBV8 401 aa12.8□□□□□ -0.36
HSPG2-208ENST00000471322 URB1-AS1Q96HZ7 61 aa12.8□□□□□ -0.36
HSPG2-208ENST00000471322 C9orf85Q96MD7 179 aa12.8□□□□□ -0.36
HSPG2-208ENST00000471322 DPH3P1Q9H4G8 78 aa12.8□□□□□ -0.36
HSPG2-208ENST00000471322 INSP01308 110 aa12.8□□□□□ -0.36
HSPG2-208ENST00000471322 FXYD7P58549 80 aa12.8□□□□□ -0.36
HSPG2-208ENST00000471322 Q6ZWC4 215 aa12.8□□□□□ -0.36
HSPG2-208ENST00000471322 LINC00467Q9BRT7 94 aa12.8□□□□□ -0.36
HSPG2-208ENST00000471322 CBY3A6NI87 242 aa12.79□□□□□ -0.36
HSPG2-208ENST00000471322 TRPT1Q86TN4 253 aaKnown RBP12.79□□□□□ -0.36
HSPG2-208ENST00000471322 FAM19A2Q8N3H0 131 aa12.79□□□□□ -0.36
HSPG2-208ENST00000471322 MAP1LC3AQ9H492 121 aa12.79□□□□□ -0.36
HSPG2-208ENST00000471322 AP5S1Q9NUS5 200 aa12.79□□□□□ -0.36
HSPG2-208ENST00000471322 ZMAT5Q9UDW3 170 aaKnown RBP12.79□□□□□ -0.36
HSPG2-208ENST00000471322 COL7A1Q02388 2944 aa12.78□□□□□ -0.36
HSPG2-208ENST00000471322 SMKR1H3BMG3 65 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms