RNA–Protein interactions for RNA: ENST00000455996.6

TMEM220-202, Transcript of transmembrane protein 220, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM220, Length 1,402 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM220-202ENST00000455996 LOC102724200A0A096LPH7 203 aaPredicted RBP11.8□□□□□ -0.52
TMEM220-202ENST00000455996 GIG44P09565 113 aaPredicted RBP11.8□□□□□ -0.52
TMEM220-202ENST00000455996 NDUFA6P56556 154 aa11.8□□□□□ -0.52
TMEM220-202ENST00000455996 SNRPEP62304 92 aaKnown RBP11.8□□□□□ -0.52
TMEM220-202ENST00000455996 KIAA1644Q3SXP7 199 aa11.8□□□□□ -0.52
TMEM220-202ENST00000455996 FAM104BQ5XKR9 115 aa11.8□□□□□ -0.52
TMEM220-202ENST00000455996 Q8N1Y9 231 aa11.8□□□□□ -0.52
TMEM220-202ENST00000455996 TP53TG3Q9ULZ0 132 aa11.8□□□□□ -0.52
TMEM220-202ENST00000455996 UBE2CO00762 179 aa11.79□□□□□ -0.52
TMEM220-202ENST00000455996 HOXA5P20719 270 aa11.79□□□□□ -0.52
TMEM220-202ENST00000455996 Q0VG73 95 aa11.79□□□□□ -0.52
TMEM220-202ENST00000455996 ALKBH7Q9BT30 221 aaPredicted RBP11.79□□□□□ -0.52
TMEM220-202ENST00000455996 NOTCH3Q9UM47 2321 aa11.79□□□□□ -0.52
TMEM220-202ENST00000455996 TRRAPQ9Y4A5 3859 aa11.78□□□□□ -0.52
TMEM220-202ENST00000455996 SPANXN1Q5VSR9 72 aa11.78□□□□□ -0.52
TMEM220-202ENST00000455996 C1orf158Q8N1D5 194 aa11.78□□□□□ -0.52
TMEM220-202ENST00000455996 TMEM256Q8N2U0 113 aa11.78□□□□□ -0.52
TMEM220-202ENST00000455996 DEFB125Q8N687 156 aa11.78□□□□□ -0.52
TMEM220-202ENST00000455996 XCL2Q9UBD3 114 aa11.78□□□□□ -0.52
TMEM220-202ENST00000455996 PHLDA3Q9Y5J5 127 aa11.78□□□□□ -0.52
TMEM220-202ENST00000455996 U3KQK5 164 aa11.78□□□□□ -0.52
TMEM220-202ENST00000455996 SRIP30626 198 aa11.77□□□□□ -0.52
TMEM220-202ENST00000455996 OR10J3Q5JRS4 329 aa11.77□□□□□ -0.52
TMEM220-202ENST00000455996 MDFICQ9P1T7 246 aa11.77□□□□□ -0.52
TMEM220-202ENST00000455996 SSTP61278 116 aa11.77□□□□□ -0.53
TMEM220-202ENST00000455996 PRR31Q5SQ13 230 aa11.77□□□□□ -0.53
TMEM220-202ENST00000455996 RNF185Q96GF1 192 aa11.77□□□□□ -0.53
TMEM220-202ENST00000455996 C1QTNF4Q9BXJ3 329 aa11.77□□□□□ -0.53
TMEM220-202ENST00000455996 STAB1Q9NY15 2570 aa11.76□□□□□ -0.53
TMEM220-202ENST00000455996 CBY3A6NI87 242 aa11.76□□□□□ -0.53
TMEM220-202ENST00000455996 AMN1Q8IY45 258 aa11.76□□□□□ -0.53
TMEM220-202ENST00000455996 CSNK1G2-AS1Q8NCQ2 148 aa11.76□□□□□ -0.53
TMEM220-202ENST00000455996 PTH2Q96A98 100 aa11.76□□□□□ -0.53
TMEM220-202ENST00000455996 LINC01587Q99440 93 aa11.76□□□□□ -0.53
TMEM220-202ENST00000455996 TIMM8BQ9Y5J9 83 aaPredicted RBP11.76□□□□□ -0.53
TMEM220-202ENST00000455996 RPL35AP18077 110 aaKnown RBP11.75□□□□□ -0.53
TMEM220-202ENST00000455996 RAB4AP20338 218 aa11.75□□□□□ -0.53
TMEM220-202ENST00000455996 MRPL51Q4U2R6 128 aaKnown RBP11.75□□□□□ -0.53
TMEM220-202ENST00000455996 SMIM15Q7Z3B0 74 aa11.75□□□□□ -0.53
TMEM220-202ENST00000455996 C18orf32Q8TCD1 76 aa11.75□□□□□ -0.53
TMEM220-202ENST00000455996 COL6A5A8TX70 2615 aa11.74□□□□□ -0.53
TMEM220-202ENST00000455996 M0R381 172 aa11.74□□□□□ -0.53
TMEM220-202ENST00000455996 ESDP10768 282 aa11.74□□□□□ -0.53
TMEM220-202ENST00000455996 EVI2AP22794 236 aa11.74□□□□□ -0.53
TMEM220-202ENST00000455996 PIK3CD-AS1Q5SR53 167 aa11.74□□□□□ -0.53
TMEM220-202ENST00000455996 HIST3H2BBQ8N257 126 aa11.74□□□□□ -0.53
TMEM220-202ENST00000455996 C11orf72Q8NBR9 251 aa11.74□□□□□ -0.53
TMEM220-202ENST00000455996 SPRY2O43597 315 aa11.73□□□□□ -0.53
TMEM220-202ENST00000455996 LINC00310P59036 64 aa11.73□□□□□ -0.53
TMEM220-202ENST00000455996 ZNF415Q09FC8 603 aa11.73□□□□□ -0.53
TMEM220-202ENST00000455996 EGFEM1PQ0D2K5 195 aa11.73□□□□□ -0.53
TMEM220-202ENST00000455996 POM121L12Q8N7R1 296 aa11.73□□□□□ -0.53
TMEM220-202ENST00000455996 AP1S3Q96PC3 154 aa11.73□□□□□ -0.53
TMEM220-202ENST00000455996 GOLT1BQ9Y3E0 138 aa11.73□□□□□ -0.53
TMEM220-202ENST00000455996 PPBPP02775 128 aa11.72□□□□□ -0.53
TMEM220-202ENST00000455996 ORMDL3Q8N138 153 aa11.72□□□□□ -0.53
TMEM220-202ENST00000455996 SYT8Q8NBV8 401 aa11.72□□□□□ -0.53
TMEM220-202ENST00000455996 CSTL1Q9H114 145 aa11.72□□□□□ -0.53
TMEM220-202ENST00000455996 KIF25-AS1Q9Y6Z4 181 aa11.72□□□□□ -0.53
TMEM220-202ENST00000455996 ANK2Q01484 3957 aa11.72□□□□□ -0.53
TMEM220-202ENST00000455996 KIR2DL5BA0A0G2JN68 375 aa11.71□□□□□ -0.53
TMEM220-202ENST00000455996 KIR2DL5BA0A0G2JPC4 375 aa11.71□□□□□ -0.53
TMEM220-202ENST00000455996 IFITM10A6NMD0 228 aa11.71□□□□□ -0.53
TMEM220-202ENST00000455996 ZNF705AQ6ZN79 300 aaPredicted RBP11.71□□□□□ -0.53
TMEM220-202ENST00000455996 BAGE3Q86Y29 109 aa11.71□□□□□ -0.53
TMEM220-202ENST00000455996 KIR2DL5AQ8N109 375 aa11.71□□□□□ -0.53
TMEM220-202ENST00000455996 KIR2DL5BQ8NHK3 375 aa11.71□□□□□ -0.53
TMEM220-202ENST00000455996 IL17DQ8TAD2 202 aa11.71□□□□□ -0.53
TMEM220-202ENST00000455996 MUC4Q99102 2169 aa11.71□□□□□ -0.53
TMEM220-202ENST00000455996 SPXQ9BT56 116 aa11.71□□□□□ -0.53
TMEM220-202ENST00000455996 DPH3P1Q9H4G8 78 aa11.71□□□□□ -0.53
TMEM220-202ENST00000455996 CMYA5Q8N3K9 4069 aa11.71□□□□□ -0.53
TMEM220-202ENST00000455996 D6R8Y8 96 aa11.7□□□□□ -0.54
TMEM220-202ENST00000455996 LINC00315P59091 139 aa11.7□□□□□ -0.54
TMEM220-202ENST00000455996 OXLD1Q5BKU9 147 aa11.7□□□□□ -0.54
TMEM220-202ENST00000455996 TMEM208Q9BTX3 173 aa11.7□□□□□ -0.54
TMEM220-202ENST00000455996 GSN-AS1Q9NRJ2 163 aa11.7□□□□□ -0.54
TMEM220-202ENST00000455996 ZMAT5Q9UDW3 170 aaKnown RBP11.7□□□□□ -0.54
TMEM220-202ENST00000455996 LAMTOR2Q9Y2Q5 125 aa11.7□□□□□ -0.54
TMEM220-202ENST00000455996 SERF1AO75920 110 aa11.69□□□□□ -0.54
TMEM220-202ENST00000455996 PRM2P04554 102 aa11.69□□□□□ -0.54
TMEM220-202ENST00000455996 CKS2P33552 79 aa11.69□□□□□ -0.54
TMEM220-202ENST00000455996 IQCJQ1A5X6 159 aa11.69□□□□□ -0.54
TMEM220-202ENST00000455996 RNASE8Q8TDE3 154 aaKnown RBP11.69□□□□□ -0.54
TMEM220-202ENST00000455996 MRAP2Q96G30 205 aa11.69□□□□□ -0.54
TMEM220-202ENST00000455996 PRELID3AQ96N28 172 aa11.69□□□□□ -0.54
TMEM220-202ENST00000455996 NDUFAF3Q9BU61 184 aa11.69□□□□□ -0.54
TMEM220-202ENST00000455996 M0R2P5 195 aa11.69□□□□□ -0.54
TMEM220-202ENST00000455996 NUPR1O60356 82 aa11.69□□□□□ -0.54
TMEM220-202ENST00000455996 HTN1P15515 57 aa11.69□□□□□ -0.54
TMEM220-202ENST00000455996 AZU1P20160 251 aa11.69□□□□□ -0.54
TMEM220-202ENST00000455996 KRTAP10-11P60412 298 aa11.69□□□□□ -0.54
TMEM220-202ENST00000455996 ZNF876PQ49A33 203 aa11.69□□□□□ -0.54
TMEM220-202ENST00000455996 TMEM263Q8WUH6 116 aaKnown RBP11.69□□□□□ -0.54
TMEM220-202ENST00000455996 RCHY1Q96PM5 261 aa11.69□□□□□ -0.54
TMEM220-202ENST00000455996 C14orf178Q8N769 122 aaPredicted RBP11.68□□□□□ -0.54
TMEM220-202ENST00000455996 URB1-AS1Q96HZ7 61 aa11.68□□□□□ -0.54
TMEM220-202ENST00000455996 CRYGDP07320 174 aa11.67□□□□□ -0.54
TMEM220-202ENST00000455996 PACRGQ96M98 296 aaPredicted RBP11.67□□□□□ -0.54
TMEM220-202ENST00000455996 HIST1H2BLQ99880 126 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 141.5 ms