RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 KRBOX1C9JBD0 128 aa11.99□□□□□ -0.49
USP39-208ENST00000455732 ORM1P02763 201 aa11.99□□□□□ -0.49
USP39-208ENST00000455732 ASIPP42127 132 aa11.99□□□□□ -0.49
USP39-208ENST00000455732 ESRGQ1W209 222 aa11.99□□□□□ -0.49
USP39-208ENST00000455732 MLST8Q9BVC4 326 aa11.99□□□□□ -0.49
USP39-208ENST00000455732 MRPS16Q9Y3D3 137 aaKnown RBP11.99□□□□□ -0.49
USP39-208ENST00000455732 CIDEAO60543 219 aa11.98□□□□□ -0.49
USP39-208ENST00000455732 LINC01559Q495D7 138 aa11.98□□□□□ -0.49
USP39-208ENST00000455732 IL36BQ9NZH7 164 aa11.98□□□□□ -0.49
USP39-208ENST00000455732 PKD1P98161 4303 aa11.97□□□□□ -0.49
USP39-208ENST00000455732 A0A1B0GVY2 172 aa11.97□□□□□ -0.49
USP39-208ENST00000455732 C9JCJ5 164 aa11.97□□□□□ -0.49
USP39-208ENST00000455732 RS1O15537 224 aa11.97□□□□□ -0.49
USP39-208ENST00000455732 IFNA1P01562 189 aa11.97□□□□□ -0.49
USP39-208ENST00000455732 S100A4P26447 101 aaKnown RBP11.97□□□□□ -0.49
USP39-208ENST00000455732 MRPL23Q16540 153 aaKnown RBP11.97□□□□□ -0.49
USP39-208ENST00000455732 ZNF506Q5JVG8 444 aa11.97□□□□□ -0.49
USP39-208ENST00000455732 CFAP126Q5VTH2 177 aa11.97□□□□□ -0.49
USP39-208ENST00000455732 BAGE2Q86Y30 109 aa11.97□□□□□ -0.49
USP39-208ENST00000455732 PGPEP1LA6NFU8 196 aa11.96□□□□□ -0.49
USP39-208ENST00000455732 M0R036 132 aa11.96□□□□□ -0.49
USP39-208ENST00000455732 BCL2P10415 239 aa11.96□□□□□ -0.49
USP39-208ENST00000455732 GATA1P15976 413 aaPredicted RBP11.96□□□□□ -0.49
USP39-208ENST00000455732 TAGLN2P37802 199 aaKnown RBP11.96□□□□□ -0.49
USP39-208ENST00000455732 RPL35P42766 123 aaKnown RBP11.96□□□□□ -0.49
USP39-208ENST00000455732 MEF2BQ02080 365 aaPredicted RBP11.96□□□□□ -0.49
USP39-208ENST00000455732 ZNF575Q86XF7 245 aa11.96□□□□□ -0.49
USP39-208ENST00000455732 NHLRC2Q8NBF2 726 aa11.96□□□□□ -0.49
USP39-208ENST00000455732 NBDYA0A0U1RRE5 68 aa11.95□□□□□ -0.5
USP39-208ENST00000455732 PRSS29PA6NIE9 313 aa11.95□□□□□ -0.5
USP39-208ENST00000455732 K7EQD1 137 aa11.95□□□□□ -0.5
USP39-208ENST00000455732 PDE6DO43924 150 aa11.95□□□□□ -0.5
USP39-208ENST00000455732 Q9H8V8 135 aa11.95□□□□□ -0.5
USP39-208ENST00000455732 PKHD1P08F94 4074 aa11.95□□□□□ -0.5
USP39-208ENST00000455732 H3BVH4 76 aa11.94□□□□□ -0.5
USP39-208ENST00000455732 ALKAL2Q6UX46 152 aa11.94□□□□□ -0.5
USP39-208ENST00000455732 PCNPQ8WW12 178 aaKnown RBP11.94□□□□□ -0.5
USP39-208ENST00000455732 DERL1Q9BUN8 251 aa11.94□□□□□ -0.5
USP39-208ENST00000455732 SCRT2Q9NQ03 307 aa11.94□□□□□ -0.5
USP39-208ENST00000455732 A8MWV9 139 aa11.93□□□□□ -0.5
USP39-208ENST00000455732 CXCL1P09341 107 aa11.93□□□□□ -0.5
USP39-208ENST00000455732 ARMS2P0C7Q2 107 aa11.93□□□□□ -0.5
USP39-208ENST00000455732 GYPEP15421 78 aa11.93□□□□□ -0.5
USP39-208ENST00000455732 SRIP30626 198 aa11.93□□□□□ -0.5
USP39-208ENST00000455732 NKX2-5P52952 324 aaPredicted RBP11.93□□□□□ -0.5
USP39-208ENST00000455732 C1orf134Q5TEV5 83 aa11.93□□□□□ -0.5
USP39-208ENST00000455732 NEGR1Q7Z3B1 354 aa11.93□□□□□ -0.5
USP39-208ENST00000455732 SMIM12Q96EX1 92 aa11.93□□□□□ -0.5
USP39-208ENST00000455732 VAX2Q9UIW0 290 aa11.93□□□□□ -0.5
USP39-208ENST00000455732 TRBV6-4A0A1B0GX49 114 aa11.92□□□□□ -0.5
USP39-208ENST00000455732 GRIFINA4D1Z8 144 aa11.92□□□□□ -0.5
USP39-208ENST00000455732 MED14OSP0DP75 135 aa11.92□□□□□ -0.5
USP39-208ENST00000455732 BLOC1S1P78537 153 aa11.92□□□□□ -0.5
USP39-208ENST00000455732 TTC32Q5I0X7 151 aa11.92□□□□□ -0.5
USP39-208ENST00000455732 SOHLH1Q5JUK2 328 aa11.92□□□□□ -0.5
USP39-208ENST00000455732 ZFP2Q6ZN57 461 aa11.92□□□□□ -0.5
USP39-208ENST00000455732 SYT8Q8NBV8 401 aa11.92□□□□□ -0.5
USP39-208ENST00000455732 LYPD6BQ8NI32 183 aa11.92□□□□□ -0.5
USP39-208ENST00000455732 PARLQ9H300 379 aa11.92□□□□□ -0.5
USP39-208ENST00000455732 KIAA1109Q2LD37 5005 aa11.92□□□□□ -0.5
USP39-208ENST00000455732 A0A1W2PPQ1 181 aa11.91□□□□□ -0.5
USP39-208ENST00000455732 MGST1P10620 155 aaKnown RBP11.91□□□□□ -0.5
USP39-208ENST00000455732 RHOHQ15669 191 aa11.91□□□□□ -0.5
USP39-208ENST00000455732 CENPWQ5EE01 88 aa11.91□□□□□ -0.5
USP39-208ENST00000455732 LYPD5Q6UWN5 251 aa11.91□□□□□ -0.5
USP39-208ENST00000455732 SH2D6Q7Z4S9 175 aa11.91□□□□□ -0.5
USP39-208ENST00000455732 SLC25A29Q8N8R3 303 aa11.91□□□□□ -0.5
USP39-208ENST00000455732 TMSB15BA0A087X1C1 80 aa11.9□□□□□ -0.5
USP39-208ENST00000455732 DMRTA1Q5VZB9 504 aa11.9□□□□□ -0.5
USP39-208ENST00000455732 PRADC1Q9BSG0 188 aa11.9□□□□□ -0.5
USP39-208ENST00000455732 BOLA1Q9Y3E2 137 aa11.9□□□□□ -0.5
USP39-208ENST00000455732 PCLOQ9Y6V0 5065 aa11.9□□□□□ -0.51
USP39-208ENST00000455732 LOC100131303A0A0U1RQF7 123 aa11.89□□□□□ -0.51
USP39-208ENST00000455732 NXPH4O95158 308 aa11.89□□□□□ -0.51
USP39-208ENST00000455732 IGLV2-8P01709 118 aa11.89□□□□□ -0.51
USP39-208ENST00000455732 PRR27Q6MZM9 219 aa11.89□□□□□ -0.51
USP39-208ENST00000455732 UFSP1Q6NVU6 142 aa11.89□□□□□ -0.51
USP39-208ENST00000455732 PHLDA3Q9Y5J5 127 aa11.89□□□□□ -0.51
USP39-208ENST00000455732 IGHV3-73A0A0B4J1V6 119 aa11.88□□□□□ -0.51
USP39-208ENST00000455732 RHODO00212 210 aa11.88□□□□□ -0.51
USP39-208ENST00000455732 BTF3P20290 206 aaKnown RBP11.88□□□□□ -0.51
USP39-208ENST00000455732 GNG4P50150 75 aa11.88□□□□□ -0.51
USP39-208ENST00000455732 TIRAPP58753 221 aa11.88□□□□□ -0.51
USP39-208ENST00000455732 RPL19P84098 196 aaKnown RBP11.88□□□□□ -0.51
USP39-208ENST00000455732 ZFP82Q8N141 532 aa11.88□□□□□ -0.51
USP39-208ENST00000455732 C6orf223Q8N319 242 aa11.88□□□□□ -0.51
USP39-208ENST00000455732 KRTAP1-5Q9BYS1 174 aa11.88□□□□□ -0.51
USP39-208ENST00000455732 MED9Q9NWA0 146 aa11.88□□□□□ -0.51
USP39-208ENST00000455732 TRBV20OR9-2A0A075B6H5 130 aa11.87□□□□□ -0.51
USP39-208ENST00000455732 RAB19A4D1S5 217 aa11.87□□□□□ -0.51
USP39-208ENST00000455732 SIVA1O15304 175 aa11.87□□□□□ -0.51
USP39-208ENST00000455732 SNAI2O43623 268 aa11.87□□□□□ -0.51
USP39-208ENST00000455732 SFRP2Q96HF1 295 aa11.87□□□□□ -0.51
USP39-208ENST00000455732 SSBP4Q9BWG4 385 aaPredicted RBP11.87□□□□□ -0.51
USP39-208ENST00000455732 JPT2Q9H910 190 aa11.87□□□□□ -0.51
USP39-208ENST00000455732 DNAH11Q96DT5 4516 aa11.87□□□□□ -0.51
USP39-208ENST00000455732 SAMD10Q9BYL1 202 aa11.86□□□□□ -0.51
USP39-208ENST00000455732 DYNC1H1Q14204 4646 aaKnown RBP11.86□□□□□ -0.51
USP39-208ENST00000455732 C19orf71A6NCJ1 209 aa11.85□□□□□ -0.51
USP39-208ENST00000455732 TMEM250H0YL14 139 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms