RNA–Protein interactions for RNA: ENST00000453954.6

TCF3-204, Transcript of transcription factor 3, humanhuman

TSL 5 BASIC

Gene TCF3, Length 3,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-204ENST00000453954 HOXB4P17483 251 aaPredicted RBP13.3□□□□□ -0.28
TCF3-204ENST00000453954 C9JAW5 83 aa13.29□□□□□ -0.28
TCF3-204ENST00000453954 CELSR1Q9NYQ6 3014 aa13.29□□□□□ -0.28
TCF3-204ENST00000453954 LGALS1P09382 135 aaKnown RBP13.29□□□□□ -0.28
TCF3-204ENST00000453954 OR10J6PQ8NGY7 276 aa13.29□□□□□ -0.28
TCF3-204ENST00000453954 OPRPNQ99935 248 aaPredicted RBP13.28□□□□□ -0.28
TCF3-204ENST00000453954 TM2D2Q9BX73 214 aa13.28□□□□□ -0.28
TCF3-204ENST00000453954 HIGD1BQ9P298 99 aa13.28□□□□□ -0.28
TCF3-204ENST00000453954 KAAG1Q9UBP8 84 aa13.28□□□□□ -0.28
TCF3-204ENST00000453954 TP53TG1Q9Y2A0 90 aa13.27□□□□□ -0.28
TCF3-204ENST00000453954 A0A0U1RRA0 63 aa13.27□□□□□ -0.29
TCF3-204ENST00000453954 ASIPP42127 132 aa13.27□□□□□ -0.29
TCF3-204ENST00000453954 HERVK_113P61574 105 aa13.27□□□□□ -0.29
TCF3-204ENST00000453954 FOXI1Q12951 378 aa13.27□□□□□ -0.29
TCF3-204ENST00000453954 C3orf56Q8N813 242 aa13.27□□□□□ -0.29
TCF3-204ENST00000453954 PHLDA1Q8WV24 401 aaPredicted RBP13.27□□□□□ -0.29
TCF3-204ENST00000453954 IGHV3-73A0A0B4J1V6 119 aa13.26□□□□□ -0.29
TCF3-204ENST00000453954 PF4V1P10720 104 aa13.26□□□□□ -0.29
TCF3-204ENST00000453954 LGALS3P17931 250 aaKnown RBP13.26□□□□□ -0.29
TCF3-204ENST00000453954 A8MWV9 139 aa13.26□□□□□ -0.29
TCF3-204ENST00000453954 F8W735 103 aaPredicted RBP13.26□□□□□ -0.29
TCF3-204ENST00000453954 IGHG4P01861 327 aa13.26□□□□□ -0.29
TCF3-204ENST00000453954 ZNF56Q15929 161 aa13.26□□□□□ -0.29
TCF3-204ENST00000453954 PRR9Q5T870 116 aa13.25□□□□□ -0.29
TCF3-204ENST00000453954 IGHV7-81A0A0B4J1V7 117 aa13.25□□□□□ -0.29
TCF3-204ENST00000453954 PRSS47A8MTI9 375 aa13.25□□□□□ -0.29
TCF3-204ENST00000453954 B5MCH6 92 aa13.25□□□□□ -0.29
TCF3-204ENST00000453954 BUB3O43684 328 aa13.25□□□□□ -0.29
TCF3-204ENST00000453954 RNASE13Q5GAN3 156 aaKnown RBP13.25□□□□□ -0.29
TCF3-204ENST00000453954 BRD3OSQ6XYD6 125 aa13.25□□□□□ -0.29
TCF3-204ENST00000453954 RNF183Q96D59 192 aa13.25□□□□□ -0.29
TCF3-204ENST00000453954 ABCA12Q86UK0 2595 aa13.25□□□□□ -0.29
TCF3-204ENST00000453954 ORMDL2Q53FV1 153 aa13.25□□□□□ -0.29
TCF3-204ENST00000453954 MRAP2Q96G30 205 aa13.25□□□□□ -0.29
TCF3-204ENST00000453954 GATA3P23771 443 aa13.24□□□□□ -0.29
TCF3-204ENST00000453954 TRPT1Q86TN4 253 aaKnown RBP13.24□□□□□ -0.29
TCF3-204ENST00000453954 LRRK2Q5S007 2527 aa13.24□□□□□ -0.29
TCF3-204ENST00000453954 C8orf31Q8N9H6 132 aa13.24□□□□□ -0.29
TCF3-204ENST00000453954 NAV2Q8IVL1 2488 aa13.23□□□□□ -0.29
TCF3-204ENST00000453954 TRBV6-1A0A0K0K1D8 114 aa13.23□□□□□ -0.29
TCF3-204ENST00000453954 CD7P09564 240 aa13.23□□□□□ -0.29
TCF3-204ENST00000453954 NFE4Q86UQ8 179 aa13.23□□□□□ -0.29
TCF3-204ENST00000453954 FN1P02751 2386 aaKnown RBP13.23□□□□□ -0.29
TCF3-204ENST00000453954 XGP55808 180 aa13.23□□□□□ -0.29
TCF3-204ENST00000453954 TRAV12-3A0A0B4J271 114 aa13.22□□□□□ -0.29
TCF3-204ENST00000453954 C11orf86A6NJI1 115 aa13.22□□□□□ -0.29
TCF3-204ENST00000453954 TSPAN13O95857 204 aa13.22□□□□□ -0.29
TCF3-204ENST00000453954 NRACQ8N912 160 aa13.22□□□□□ -0.29
TCF3-204ENST00000453954 JMJD1CQ15652 2540 aa13.22□□□□□ -0.29
TCF3-204ENST00000453954 PAX8Q06710 450 aa13.22□□□□□ -0.29
TCF3-204ENST00000453954 BAALCQ8WXS3 180 aa13.22□□□□□ -0.29
TCF3-204ENST00000453954 SLC50A1Q9BRV3 221 aa13.22□□□□□ -0.29
TCF3-204ENST00000453954 C1QTNF4Q9BXJ3 329 aa13.22□□□□□ -0.29
TCF3-204ENST00000453954 LINC01559Q495D7 138 aa13.22□□□□□ -0.29
TCF3-204ENST00000453954 Q6ZS46 218 aa13.22□□□□□ -0.29
TCF3-204ENST00000453954 TEX29Q8N6K0 151 aa13.22□□□□□ -0.29
TCF3-204ENST00000453954 EEF1AKMT3Q96AZ1 226 aa13.22□□□□□ -0.29
TCF3-204ENST00000453954 MTORP42345 2549 aa13.21□□□□□ -0.29
TCF3-204ENST00000453954 MORN3Q6PF18 240 aaPredicted RBP13.21□□□□□ -0.29
TCF3-204ENST00000453954 TRAV12-2A0A075B6T6 113 aa13.21□□□□□ -0.3
TCF3-204ENST00000453954 TCL1BO95988 128 aa13.21□□□□□ -0.3
TCF3-204ENST00000453954 TRBV12-3P01733 135 aa13.21□□□□□ -0.3
TCF3-204ENST00000453954 DPH3P1Q9H4G8 78 aa13.21□□□□□ -0.3
TCF3-204ENST00000453954 HIVEP2P31629 2446 aa13.2□□□□□ -0.3
TCF3-204ENST00000453954 SAA4P35542 130 aa13.2□□□□□ -0.3
TCF3-204ENST00000453954 GATD1Q8NB37 220 aa13.2□□□□□ -0.3
TCF3-204ENST00000453954 TNFRSF13BO14836 293 aaPredicted RBP13.2□□□□□ -0.3
TCF3-204ENST00000453954 FAM159AQ6UWV7 190 aa13.2□□□□□ -0.3
TCF3-204ENST00000453954 RASL10AQ92737 203 aa13.2□□□□□ -0.3
TCF3-204ENST00000453954 ANKRD29Q8N6D5 301 aa13.19□□□□□ -0.3
TCF3-204ENST00000453954 RNF5Q99942 180 aa13.19□□□□□ -0.3
TCF3-204ENST00000453954 PKD1L2Q7Z442 2459 aa13.19□□□□□ -0.3
TCF3-204ENST00000453954 TCF15Q12870 199 aa13.19□□□□□ -0.3
TCF3-204ENST00000453954 TRBV7-3A0A075B6L6 115 aa13.19□□□□□ -0.3
TCF3-204ENST00000453954 SNCGO76070 127 aa13.19□□□□□ -0.3
TCF3-204ENST00000453954 TTC32Q5I0X7 151 aa13.19□□□□□ -0.3
TCF3-204ENST00000453954 LYRM7Q5U5X0 104 aa13.19□□□□□ -0.3
TCF3-204ENST00000453954 ZFP36P26651 326 aaKnown RBP13.18□□□□□ -0.3
TCF3-204ENST00000453954 UNQ9165/PRO28630Q6UXU0 137 aa13.18□□□□□ -0.3
TCF3-204ENST00000453954 TRAV21A0A0B4J279 112 aa13.18□□□□□ -0.3
TCF3-204ENST00000453954 IGHV7-4-1A0A0J9YVY3 117 aa13.18□□□□□ -0.3
TCF3-204ENST00000453954 Q6ZUT4 128 aa13.18□□□□□ -0.3
TCF3-204ENST00000453954 OR11H6Q8NGC7 330 aa13.18□□□□□ -0.3
TCF3-204ENST00000453954 SPXQ9BT56 116 aa13.18□□□□□ -0.3
TCF3-204ENST00000453954 ZMAT4Q9H898 229 aa13.18□□□□□ -0.3
TCF3-204ENST00000453954 MSRB2Q9Y3D2 182 aa13.18□□□□□ -0.3
TCF3-204ENST00000453954 NTN5Q8WTR8 489 aaPredicted RBP13.17□□□□□ -0.3
TCF3-204ENST00000453954 C20orf173Q96LM9 149 aa13.17□□□□□ -0.3
TCF3-204ENST00000453954 ZFAND6Q6FIF0 208 aa13.17□□□□□ -0.3
TCF3-204ENST00000453954 LY6LH3BQJ8 138 aa13.17□□□□□ -0.3
TCF3-204ENST00000453954 PPDPFLQ8WWR9 84 aa13.17□□□□□ -0.3
TCF3-204ENST00000453954 Q8N9W7 124 aa13.16□□□□□ -0.3
TCF3-204ENST00000453954 SMCPP49901 116 aaPredicted RBP13.16□□□□□ -0.3
TCF3-204ENST00000453954 CCDC140Q96MF4 163 aa13.16□□□□□ -0.3
TCF3-204ENST00000453954 ZNF688P0C7X2 276 aa13.16□□□□□ -0.3
TCF3-204ENST00000453954 IGLV2-18A0A075B6J9 118 aa13.15□□□□□ -0.3
TCF3-204ENST00000453954 A4D1N5 150 aa13.15□□□□□ -0.3
TCF3-204ENST00000453954 TAL2Q16559 108 aa13.15□□□□□ -0.3
TCF3-204ENST00000453954 KLK9Q9UKQ9 250 aa13.15□□□□□ -0.3
TCF3-204ENST00000453954 CRIP2P52943 208 aaPredicted RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms