RNA–Protein interactions for RNA: ENST00000453553.1

USP25-206, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 3

Gene USP25, Length 611 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-206ENST00000453553 PCDH15Q96QU1 1955 aa1.78□□□□□ -2.12
USP25-206ENST00000453553 AKAP11Q9UKA4 1901 aa1.78□□□□□ -2.12
USP25-206ENST00000453553 FER1L6Q2WGJ9 1857 aa1.78□□□□□ -2.12
USP25-206ENST00000453553 QSER1Q2KHR3 1735 aa1.78□□□□□ -2.12
USP25-206ENST00000453553 TOPAZ1Q8N9V7 1692 aa1.78□□□□□ -2.12
USP25-206ENST00000453553 PZPP20742 1482 aa1.78□□□□□ -2.12
USP25-206ENST00000453553 NKTRP30414 1462 aaKnown RBP1.78□□□□□ -2.12
USP25-206ENST00000453553 CCDC171Q6TFL3 1326 aa1.78□□□□□ -2.12
USP25-206ENST00000453553 IGKV3D-7A0A0C4DH55 119 aa1.78□□□□□ -2.12
USP25-206ENST00000453553 IGKV3OR2-268A0A0C4DH90 116 aa1.78□□□□□ -2.12
USP25-206ENST00000453553 H3BRM9 83 aa1.78□□□□□ -2.12
USP25-206ENST00000453553 J3QR89 54 aa1.78□□□□□ -2.12
USP25-206ENST00000453553 CCL25O15444 150 aa1.78□□□□□ -2.12
USP25-206ENST00000453553 IGLC6P0CF74 106 aa1.78□□□□□ -2.12
USP25-206ENST00000453553 HIST1H1BP16401 226 aaKnown RBP1.78□□□□□ -2.12
USP25-206ENST00000453553 CKS2P33552 79 aa1.78□□□□□ -2.12
USP25-206ENST00000453553 MPV17LQ2QL34 196 aa1.78□□□□□ -2.12
USP25-206ENST00000453553 GLYATL3Q5SZD4 288 aa1.78□□□□□ -2.12
USP25-206ENST00000453553 CASC2Q6XLA1 102 aa1.78□□□□□ -2.12
USP25-206ENST00000453553 CYSTM1Q9H1C7 97 aa1.78□□□□□ -2.12
USP25-206ENST00000453553 TPT1P8Q9HAU6 139 aa1.78□□□□□ -2.12
USP25-206ENST00000453553 COMMD3Q9UBI1 195 aa1.78□□□□□ -2.12
USP25-206ENST00000453553 TNFSF18Q9UNG2 199 aa1.78□□□□□ -2.12
USP25-206ENST00000453553 DNAJC15Q9Y5T4 150 aa1.78□□□□□ -2.12
USP25-206ENST00000453553 BPTFQ12830 3046 aa1.78□□□□□ -2.12
USP25-206ENST00000453553 SMG1Q96Q15 3661 aaKnown RBP1.78□□□□□ -2.13
USP25-206ENST00000453553 RBBP6Q7Z6E9 1792 aaKnown RBP1.77□□□□□ -2.13
USP25-206ENST00000453553 NRAPQ86VF7 1730 aa1.77□□□□□ -2.13
USP25-206ENST00000453553 PEAK1Q9H792 1746 aa1.77□□□□□ -2.13
USP25-206ENST00000453553 NRXN3Q9Y4C0 1643 aa1.77□□□□□ -2.13
USP25-206ENST00000453553 UGGT2Q9NYU1 1516 aa1.77□□□□□ -2.13
USP25-206ENST00000453553 ZNF518AQ6AHZ1 1483 aa1.77□□□□□ -2.13
USP25-206ENST00000453553 ARHGAP35Q9NRY4 1499 aa1.77□□□□□ -2.13
USP25-206ENST00000453553 NUPR1O60356 82 aa1.77□□□□□ -2.13
USP25-206ENST00000453553 DNAL4O96015 105 aa1.77□□□□□ -2.13
USP25-206ENST00000453553 ETV6P41212 452 aa1.77□□□□□ -2.13
USP25-206ENST00000453553 C10orf111Q8N326 155 aa1.77□□□□□ -2.13
USP25-206ENST00000453553 MMGT1Q8N4V1 131 aa1.77□□□□□ -2.13
USP25-206ENST00000453553 OTOSQ8NHW6 89 aa1.77□□□□□ -2.13
USP25-206ENST00000453553 CIB3Q96Q77 187 aaPredicted RBP1.77□□□□□ -2.13
USP25-206ENST00000453553 VPS25Q9BRG1 176 aa1.77□□□□□ -2.13
USP25-206ENST00000453553 MPC1Q9Y5U8 109 aa1.77□□□□□ -2.13
USP25-206ENST00000453553 PAPPA2Q9BXP8 1791 aa1.77□□□□□ -2.13
USP25-206ENST00000453553 FMN2Q9NZ56 1722 aa1.77□□□□□ -2.13
USP25-206ENST00000453553 NEXMIFQ5QGS0 1516 aa1.76□□□□□ -2.13
USP25-206ENST00000453553 NCOA2Q15596 1464 aa1.76□□□□□ -2.13
USP25-206ENST00000453553 NLRP1Q9C000 1473 aa1.76□□□□□ -2.13
USP25-206ENST00000453553 MLH3Q9UHC1 1453 aa1.76□□□□□ -2.13
USP25-206ENST00000453553 ACACBO00763 2458 aa1.76□□□□□ -2.13
USP25-206ENST00000453553 K7ERU9 68 aa1.76□□□□□ -2.13
USP25-206ENST00000453553 M0R2N4 97 aa1.76□□□□□ -2.13
USP25-206ENST00000453553 LINC00694P0DN24 101 aa1.76□□□□□ -2.13
USP25-206ENST00000453553 ZNF25P17030 456 aaPredicted RBP1.76□□□□□ -2.13
USP25-206ENST00000453553 PAIP2BQ9ULR5 123 aaKnown RBP1.76□□□□□ -2.13
USP25-206ENST00000453553 POLEQ07864 2286 aa1.76□□□□□ -2.13
USP25-206ENST00000453553 KNDC1Q76NI1 1749 aa1.76□□□□□ -2.13
USP25-206ENST00000453553 ANKRD17O75179 2603 aaKnown RBP1.76□□□□□ -2.13
USP25-206ENST00000453553 RELNP78509 3460 aa1.76□□□□□ -2.13
USP25-206ENST00000453553 KALRNO60229 2985 aa1.76□□□□□ -2.13
USP25-206ENST00000453553 PTPN13Q12923 2485 aa1.76□□□□□ -2.13
USP25-206ENST00000453553 SLIT1O75093 1534 aa1.76□□□□□ -2.13
USP25-206ENST00000453553 COL1A1P02452 1464 aaPredicted RBP1.75□□□□□ -2.13
USP25-206ENST00000453553 MYOM2P54296 1465 aa1.75□□□□□ -2.13
USP25-206ENST00000453553 TRPM7Q96QT4 1865 aa1.75□□□□□ -2.13
USP25-206ENST00000453553 OVOS2A0A0J9YW53 1432 aa1.75□□□□□ -2.13
USP25-206ENST00000453553 OVOS2Q6IE36 1432 aa1.75□□□□□ -2.13
USP25-206ENST00000453553 C10orf71Q711Q0 1435 aa1.75□□□□□ -2.13
USP25-206ENST00000453553 ARFGEF1Q9Y6D6 1849 aa1.75□□□□□ -2.13
USP25-206ENST00000453553 MYO18BQ8IUG5 2567 aa1.75□□□□□ -2.13
USP25-206ENST00000453553 CEP250Q9BV73 2442 aa1.75□□□□□ -2.13
USP25-206ENST00000453553 SCN3AQ9NY46 2000 aa1.75□□□□□ -2.13
USP25-206ENST00000453553 IGKV3-7A0A075B6H7 116 aa1.75□□□□□ -2.13
USP25-206ENST00000453553 NBPF19A0A087WUL8 3843 aa1.75□□□□□ -2.13
USP25-206ENST00000453553 LOC110117498A0A087WWA1 95 aa1.75□□□□□ -2.13
USP25-206ENST00000453553 IGHV1-24A0A0C4DH33 117 aa1.75□□□□□ -2.13
USP25-206ENST00000453553 INE1O15225 51 aa1.75□□□□□ -2.13
USP25-206ENST00000453553 EDF1O60869 148 aaKnown RBP1.75□□□□□ -2.13
USP25-206ENST00000453553 CD3DP04234 171 aa1.75□□□□□ -2.13
USP25-206ENST00000453553 KDELR1P24390 212 aa1.75□□□□□ -2.13
USP25-206ENST00000453553 NCS1P62166 190 aa1.75□□□□□ -2.13
USP25-206ENST00000453553 NEDD8Q15843 81 aa1.75□□□□□ -2.13
USP25-206ENST00000453553 SPRNQ5BIV9 151 aa1.75□□□□□ -2.13
USP25-206ENST00000453553 CTAGE3PQ8IX95 158 aa1.75□□□□□ -2.13
USP25-206ENST00000453553 C5orf17Q8NAS9 161 aa1.75□□□□□ -2.13
USP25-206ENST00000453553 SMIM7Q9BQ49 75 aa1.75□□□□□ -2.13
USP25-206ENST00000453553 METTL1Q9UBP6 276 aaKnown RBP1.75□□□□□ -2.13
USP25-206ENST00000453553 ZFP30Q9Y2G7 519 aa1.75□□□□□ -2.13
USP25-206ENST00000453553 PTPN23Q9H3S7 1636 aa1.75□□□□□ -2.13
USP25-206ENST00000453553 ABCA12Q86UK0 2595 aa1.75□□□□□ -2.13
USP25-206ENST00000453553 LAMB2P55268 1798 aa1.75□□□□□ -2.13
USP25-206ENST00000453553 REV3LO60673 3130 aa1.74□□□□□ -2.13
USP25-206ENST00000453553 PLXNC1O60486 1568 aa1.74□□□□□ -2.13
USP25-206ENST00000453553 SAMD9Q5K651 1589 aa1.74□□□□□ -2.13
USP25-206ENST00000453553 TRBV6-7A0A0A0MS04 114 aa1.74□□□□□ -2.13
USP25-206ENST00000453553 PNMA8CA0A1B0GUJ8 204 aa1.74□□□□□ -2.13
USP25-206ENST00000453553 FAM236AA0A1B0GUQ0 79 aa1.74□□□□□ -2.13
USP25-206ENST00000453553 FAM236BA0A1B0GV22 79 aa1.74□□□□□ -2.13
USP25-206ENST00000453553 KLF7O75840 302 aaPredicted RBP1.74□□□□□ -2.13
USP25-206ENST00000453553 FREM3P0C091 2139 aa1.74□□□□□ -2.13
USP25-206ENST00000453553 TSPAN19P0C672 248 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 146.5 ms