RNA–Protein interactions for RNA: ENST00000453257.1

TRGVB-201, Transcript of T cell receptor gamma variable B (pseudogene), humanhuman

BASIC

Gene TRGVB, Length 471 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRGVB-201ENST00000453257 COL4A2P08572 1712 aa1.48□□□□□ -2.17
TRGVB-201ENST00000453257 COL24A1Q17RW2 1714 aa1.48□□□□□ -2.17
TRGVB-201ENST00000453257 ABCC5O15440 1437 aa1.48□□□□□ -2.17
TRGVB-201ENST00000453257 CASKIN1Q8WXD9 1431 aa1.48□□□□□ -2.17
TRGVB-201ENST00000453257 CPAMD8Q8IZJ3 1885 aa1.48□□□□□ -2.17
TRGVB-201ENST00000453257 ARAP2Q8WZ64 1704 aa1.47□□□□□ -2.17
TRGVB-201ENST00000453257 MARF1Q9Y4F3 1742 aaKnown RBP1.47□□□□□ -2.17
TRGVB-201ENST00000453257 HELZP42694 1942 aaKnown RBP1.47□□□□□ -2.17
TRGVB-201ENST00000453257 TRAV1-1A0A0B4J248 108 aa1.47□□□□□ -2.17
TRGVB-201ENST00000453257 C5orf67F2Z3F1 127 aa1.47□□□□□ -2.17
TRGVB-201ENST00000453257 PROSCO94903 275 aa1.47□□□□□ -2.17
TRGVB-201ENST00000453257 COX7CP15954 63 aa1.47□□□□□ -2.17
TRGVB-201ENST00000453257 IQCJQ1A5X6 159 aa1.47□□□□□ -2.17
TRGVB-201ENST00000453257 C6orf52Q5T4I8 152 aa1.47□□□□□ -2.17
TRGVB-201ENST00000453257 Q6ZRN7 208 aaPredicted RBP1.47□□□□□ -2.17
TRGVB-201ENST00000453257 SMIM7Q9BQ49 75 aa1.47□□□□□ -2.17
TRGVB-201ENST00000453257 MED9Q9NWA0 146 aa1.47□□□□□ -2.17
TRGVB-201ENST00000453257 CCDC141Q6ZP82 1450 aa1.47□□□□□ -2.17
TRGVB-201ENST00000453257 ADAMTS7Q9UKP4 1686 aa1.47□□□□□ -2.17
TRGVB-201ENST00000453257 FBN1P35555 2871 aaKnown RBP1.47□□□□□ -2.17
TRGVB-201ENST00000453257 DAPK1P53355 1430 aa1.47□□□□□ -2.17
TRGVB-201ENST00000453257 C10orf71Q711Q0 1435 aa1.47□□□□□ -2.17
TRGVB-201ENST00000453257 MCM3APO60318 1980 aa1.47□□□□□ -2.17
TRGVB-201ENST00000453257 TANC2Q9HCD6 1990 aa1.47□□□□□ -2.17
TRGVB-201ENST00000453257 LAMC3Q9Y6N6 1575 aa1.47□□□□□ -2.17
TRGVB-201ENST00000453257 PLEKHH2Q8IVE3 1493 aa1.46□□□□□ -2.18
TRGVB-201ENST00000453257 SBF2Q86WG5 1849 aa1.46□□□□□ -2.18
TRGVB-201ENST00000453257 TRAV2A0A0B4J234 112 aa1.46□□□□□ -2.18
TRGVB-201ENST00000453257 UBE2L5PA0A1B0GUS4 154 aa1.46□□□□□ -2.18
TRGVB-201ENST00000453257 RBAKDNA6NC62 111 aa1.46□□□□□ -2.18
TRGVB-201ENST00000453257 SNCGO76070 127 aa1.46□□□□□ -2.18
TRGVB-201ENST00000453257 UBL3O95164 117 aa1.46□□□□□ -2.18
TRGVB-201ENST00000453257 PIRTP0C851 137 aa1.46□□□□□ -2.18
TRGVB-201ENST00000453257 PIPP12273 146 aaPredicted RBP1.46□□□□□ -2.18
TRGVB-201ENST00000453257 IL7P13232 177 aa1.46□□□□□ -2.18
TRGVB-201ENST00000453257 ADCYAP1P18509 176 aa1.46□□□□□ -2.18
TRGVB-201ENST00000453257 SSR2P43308 183 aa1.46□□□□□ -2.18
TRGVB-201ENST00000453257 UBE2L3P68036 154 aaKnown RBP1.46□□□□□ -2.18
TRGVB-201ENST00000453257 DCDP81605 110 aaKnown RBP1.46□□□□□ -2.18
TRGVB-201ENST00000453257 INSL4Q14641 139 aa1.46□□□□□ -2.18
TRGVB-201ENST00000453257 SPANXN1Q5VSR9 72 aa1.46□□□□□ -2.18
TRGVB-201ENST00000453257 CASC2Q6XLA1 102 aa1.46□□□□□ -2.18
TRGVB-201ENST00000453257 SLC25A26Q70HW3 274 aa1.46□□□□□ -2.18
TRGVB-201ENST00000453257 C5orf38Q86SI9 138 aa1.46□□□□□ -2.18
TRGVB-201ENST00000453257 OR8B3Q8NGG8 313 aa1.46□□□□□ -2.18
TRGVB-201ENST00000453257 TMEM254Q8TBM7 123 aa1.46□□□□□ -2.18
TRGVB-201ENST00000453257 DYNLRB2Q8TF09 96 aa1.46□□□□□ -2.18
TRGVB-201ENST00000453257 ATG5Q9H1Y0 275 aa1.46□□□□□ -2.18
TRGVB-201ENST00000453257 DPH3P1Q9H4G8 78 aa1.46□□□□□ -2.18
TRGVB-201ENST00000453257 CPSF1Q10570 1443 aaKnown RBP1.46□□□□□ -2.18
TRGVB-201ENST00000453257 ICE1Q9Y2F5 2266 aa1.46□□□□□ -2.18
TRGVB-201ENST00000453257 COL5A3P25940 1745 aaPredicted RBP1.46□□□□□ -2.18
TRGVB-201ENST00000453257 DISP1Q96F81 1524 aa1.45□□□□□ -2.18
TRGVB-201ENST00000453257 ARHGEF12Q9NZN5 1544 aa1.45□□□□□ -2.18
TRGVB-201ENST00000453257 MALRD1Q5VYJ5 2156 aa1.45□□□□□ -2.18
TRGVB-201ENST00000453257 KIAA1549LQ6ZVL6 1849 aa1.45□□□□□ -2.18
TRGVB-201ENST00000453257 CCDC88BA6NC98 1476 aa1.45□□□□□ -2.18
TRGVB-201ENST00000453257 PTPRMP28827 1452 aa1.45□□□□□ -2.18
TRGVB-201ENST00000453257 ERVK-7P63135 1459 aa1.45□□□□□ -2.18
TRGVB-201ENST00000453257 PXDNQ92626 1479 aa1.45□□□□□ -2.18
TRGVB-201ENST00000453257 PPLO60437 1756 aa1.45□□□□□ -2.18
TRGVB-201ENST00000453257 LOC107984156A0A0G2JMH3 177 aa1.45□□□□□ -2.18
TRGVB-201ENST00000453257 IBA57-AS1B1ANH7 110 aa1.45□□□□□ -2.18
TRGVB-201ENST00000453257 ARL17AQ8IVW1 177 aa1.45□□□□□ -2.18
TRGVB-201ENST00000453257 DEFB119Q8N690 84 aa1.45□□□□□ -2.18
TRGVB-201ENST00000453257 NPVFQ9HCQ7 196 aa1.45□□□□□ -2.18
TRGVB-201ENST00000453257 BET1LQ9NYM9 111 aa1.45□□□□□ -2.18
TRGVB-201ENST00000453257 LHFPL6Q9Y693 200 aa1.45□□□□□ -2.18
TRGVB-201ENST00000453257 UACAQ9BZF9 1416 aa1.45□□□□□ -2.18
TRGVB-201ENST00000453257 LRRIQ1Q96JM4 1722 aa1.45□□□□□ -2.18
TRGVB-201ENST00000453257 PRDM15P57071 1507 aaPredicted RBP1.45□□□□□ -2.18
TRGVB-201ENST00000453257 PARP14Q460N5 1801 aa1.45□□□□□ -2.18
TRGVB-201ENST00000453257 ZFC3H1O60293 1989 aaKnown RBP1.45□□□□□ -2.18
TRGVB-201ENST00000453257 LAMB1P07942 1786 aa1.44□□□□□ -2.18
TRGVB-201ENST00000453257 CASZ1Q86V15 1759 aa1.44□□□□□ -2.18
TRGVB-201ENST00000453257 LRP5O75197 1615 aa1.44□□□□□ -2.18
TRGVB-201ENST00000453257 IFT140Q96RY7 1462 aa1.44□□□□□ -2.18
TRGVB-201ENST00000453257 HEATR5AQ86XA9 2040 aa1.44□□□□□ -2.18
TRGVB-201ENST00000453257 TRPM6Q9BX84 2022 aa1.44□□□□□ -2.18
TRGVB-201ENST00000453257 MON2Q7Z3U7 1717 aa1.44□□□□□ -2.18
TRGVB-201ENST00000453257 SCAPERQ9BY12 1400 aa1.44□□□□□ -2.18
TRGVB-201ENST00000453257 TRAV10A0A0B4J240 114 aa1.44□□□□□ -2.18
TRGVB-201ENST00000453257 TRAV12-1A0A0B4J245 112 aa1.44□□□□□ -2.18
TRGVB-201ENST00000453257 SMIM31A0A1B0GVY4 71 aa1.44□□□□□ -2.18
TRGVB-201ENST00000453257 K7EP34 96 aa1.44□□□□□ -2.18
TRGVB-201ENST00000453257 ERC2-IT1O76042 136 aa1.44□□□□□ -2.18
TRGVB-201ENST00000453257 ASAH2BP0C7U1 165 aa1.44□□□□□ -2.18
TRGVB-201ENST00000453257 ASIPP42127 132 aa1.44□□□□□ -2.18
TRGVB-201ENST00000453257 DEFB113Q30KQ7 82 aa1.44□□□□□ -2.18
TRGVB-201ENST00000453257 FAM74A1Q5RGS3 127 aa1.44□□□□□ -2.18
TRGVB-201ENST00000453257 KRTAP26-1Q6PEX3 210 aa1.44□□□□□ -2.18
TRGVB-201ENST00000453257 ZCCHC23Q6ZST2 131 aa1.44□□□□□ -2.18
TRGVB-201ENST00000453257 COMMD6Q7Z4G1 85 aa1.44□□□□□ -2.18
TRGVB-201ENST00000453257 C9orf163Q8N9P6 203 aa1.44□□□□□ -2.18
TRGVB-201ENST00000453257 TMEM141Q96I45 108 aa1.44□□□□□ -2.18
TRGVB-201ENST00000453257 NDUFA12Q9UI09 145 aa1.44□□□□□ -2.18
TRGVB-201ENST00000453257 LAMB2P55268 1798 aa1.44□□□□□ -2.18
TRGVB-201ENST00000453257 MGAMO43451 1857 aa1.43□□□□□ -2.18
TRGVB-201ENST00000453257 KIF20BQ96Q89 1820 aa1.43□□□□□ -2.18
TRGVB-201ENST00000453257 PIGBOS1A0A0B4J2F0 54 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms