RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 IGLC6P0CF74 106 aa12.83□□□□□ -0.35
TCOF1-206ENST00000445265 ZNF80P51504 273 aaPredicted RBP12.83□□□□□ -0.35
TCOF1-206ENST00000445265 RHOHQ15669 191 aa12.83□□□□□ -0.36
TCOF1-206ENST00000445265 TSSC4Q9Y5U2 329 aaPredicted RBP12.83□□□□□ -0.36
TCOF1-206ENST00000445265 COL4A2P08572 1712 aa12.83□□□□□ -0.36
TCOF1-206ENST00000445265 KNCNA6PVL3 124 aa12.83□□□□□ -0.36
TCOF1-206ENST00000445265 RPL39LQ96EH5 51 aaKnown RBP12.83□□□□□ -0.36
TCOF1-206ENST00000445265 ANAPC13Q9BS18 74 aa12.83□□□□□ -0.36
TCOF1-206ENST00000445265 PRO1854Q9UHT4 67 aa12.83□□□□□ -0.36
TCOF1-206ENST00000445265 RNF114Q9Y508 228 aa12.83□□□□□ -0.36
TCOF1-206ENST00000445265 TRAV12-1A0A0B4J245 112 aa12.83□□□□□ -0.36
TCOF1-206ENST00000445265 NPC2P61916 151 aa12.83□□□□□ -0.36
TCOF1-206ENST00000445265 GAGE2BQ13066 116 aa12.83□□□□□ -0.36
TCOF1-206ENST00000445265 GAGE2EQ4V326 116 aa12.83□□□□□ -0.36
TCOF1-206ENST00000445265 C2orf82Q6UX34 121 aa12.83□□□□□ -0.36
TCOF1-206ENST00000445265 GAGE2DQ9UEU5 116 aa12.83□□□□□ -0.36
TCOF1-206ENST00000445265 RBMY1BA6NDE4 496 aaKnown RBP12.82□□□□□ -0.36
TCOF1-206ENST00000445265 RBMY1EA6NEQ0 496 aaKnown RBP12.82□□□□□ -0.36
TCOF1-206ENST00000445265 RBMY1DP0C7P1 496 aaKnown RBP12.82□□□□□ -0.36
TCOF1-206ENST00000445265 RBMY1A1P0DJD3 496 aaKnown RBP12.82□□□□□ -0.36
TCOF1-206ENST00000445265 RBMY1CP0DJD4 496 aa12.82□□□□□ -0.36
TCOF1-206ENST00000445265 PHLDA1Q8WV24 401 aaPredicted RBP12.82□□□□□ -0.36
TCOF1-206ENST00000445265 IGHV4-61A0A0C4DH41 118 aa12.82□□□□□ -0.36
TCOF1-206ENST00000445265 AMTNQ6UX39 209 aa12.82□□□□□ -0.36
TCOF1-206ENST00000445265 PPDPFLQ8WWR9 84 aa12.82□□□□□ -0.36
TCOF1-206ENST00000445265 ZFAND6Q6FIF0 208 aa12.82□□□□□ -0.36
TCOF1-206ENST00000445265 SPRY2O43597 315 aa12.81□□□□□ -0.36
TCOF1-206ENST00000445265 IGLV2-11P01706 119 aa12.81□□□□□ -0.36
TCOF1-206ENST00000445265 MED14OSP0DP75 135 aa12.81□□□□□ -0.36
TCOF1-206ENST00000445265 CHCHD5Q9BSY4 110 aa12.81□□□□□ -0.36
TCOF1-206ENST00000445265 FXYD2P54710 66 aa12.81□□□□□ -0.36
TCOF1-206ENST00000445265 BPTFQ12830 3046 aa12.81□□□□□ -0.36
TCOF1-206ENST00000445265 IGLL5B9A064 214 aa12.81□□□□□ -0.36
TCOF1-206ENST00000445265 PIEZO2Q9H5I5 2752 aa12.81□□□□□ -0.36
TCOF1-206ENST00000445265 AJUBAQ96IF1 538 aa12.81□□□□□ -0.36
TCOF1-206ENST00000445265 LINC01619G3V211 115 aa12.8□□□□□ -0.36
TCOF1-206ENST00000445265 TTTY13Q9BZ97 58 aa12.8□□□□□ -0.36
TCOF1-206ENST00000445265 TLN1Q9Y490 2541 aaKnown RBP12.8□□□□□ -0.36
TCOF1-206ENST00000445265 RNF223E7ERA6 249 aa12.8□□□□□ -0.36
TCOF1-206ENST00000445265 CRIP1P50238 77 aa12.8□□□□□ -0.36
TCOF1-206ENST00000445265 FOXI2Q6ZQN5 318 aa12.8□□□□□ -0.36
TCOF1-206ENST00000445265 SPINK8P0C7L1 97 aa12.79□□□□□ -0.36
TCOF1-206ENST00000445265 SCGB1A1P11684 91 aa12.79□□□□□ -0.36
TCOF1-206ENST00000445265 UBE2E2Q96LR5 201 aa12.79□□□□□ -0.36
TCOF1-206ENST00000445265 TANC2Q9HCD6 1990 aa12.79□□□□□ -0.36
TCOF1-206ENST00000445265 CKS1BP61024 79 aa12.79□□□□□ -0.36
TCOF1-206ENST00000445265 EBI3Q14213 229 aa12.79□□□□□ -0.36
TCOF1-206ENST00000445265 BLCAPP62952 87 aa12.79□□□□□ -0.36
TCOF1-206ENST00000445265 IGHV4-38-2P0DP08 117 aa12.78□□□□□ -0.36
TCOF1-206ENST00000445265 SAP30O75446 220 aa12.78□□□□□ -0.36
TCOF1-206ENST00000445265 PRIMA1Q86XR5 153 aa12.78□□□□□ -0.36
TCOF1-206ENST00000445265 DSCAMO60469 2012 aa12.78□□□□□ -0.36
TCOF1-206ENST00000445265 GAGE12HA6NDE8 117 aa12.78□□□□□ -0.36
TCOF1-206ENST00000445265 IGHV3-53P01767 116 aa12.78□□□□□ -0.36
TCOF1-206ENST00000445265 CCDC140Q96MF4 163 aa12.78□□□□□ -0.36
TCOF1-206ENST00000445265 C1QTNF4Q9BXJ3 329 aa12.78□□□□□ -0.36
TCOF1-206ENST00000445265 TRAV13-1A0A0B4J241 112 aa12.78□□□□□ -0.36
TCOF1-206ENST00000445265 NDUFA12Q9UI09 145 aa12.78□□□□□ -0.36
TCOF1-206ENST00000445265 CFAP161Q6P656 301 aa12.77□□□□□ -0.36
TCOF1-206ENST00000445265 TOMM6Q96B49 74 aa12.77□□□□□ -0.36
TCOF1-206ENST00000445265 SUMO4Q6EEV6 95 aa12.77□□□□□ -0.36
TCOF1-206ENST00000445265 K7EMT4 169 aa12.77□□□□□ -0.37
TCOF1-206ENST00000445265 RNASE1P07998 156 aaKnown RBP12.77□□□□□ -0.37
TCOF1-206ENST00000445265 LINC00158P58513 81 aa12.77□□□□□ -0.37
TCOF1-206ENST00000445265 ZFP2Q6ZN57 461 aa12.77□□□□□ -0.37
TCOF1-206ENST00000445265 IGHV4-59P01825 116 aa12.76□□□□□ -0.37
TCOF1-206ENST00000445265 IGHG2P01859 326 aa12.76□□□□□ -0.37
TCOF1-206ENST00000445265 DEFB112Q30KQ8 113 aa12.76□□□□□ -0.37
TCOF1-206ENST00000445265 TNFRSF13BO14836 293 aaPredicted RBP12.76□□□□□ -0.37
TCOF1-206ENST00000445265 FGF6P10767 208 aa12.76□□□□□ -0.37
TCOF1-206ENST00000445265 XCL2Q9UBD3 114 aa12.76□□□□□ -0.37
TCOF1-206ENST00000445265 U3KQK5 164 aa12.76□□□□□ -0.37
TCOF1-206ENST00000445265 CUL9Q8IWT3 2517 aa12.76□□□□□ -0.37
TCOF1-206ENST00000445265 MAPK1IP1LQ8NDC0 245 aa12.76□□□□□ -0.37
TCOF1-206ENST00000445265 C10orf105Q8TEF2 133 aa12.76□□□□□ -0.37
TCOF1-206ENST00000445265 CRPP02741 224 aa12.75□□□□□ -0.37
TCOF1-206ENST00000445265 LGALS1P09382 135 aaKnown RBP12.75□□□□□ -0.37
TCOF1-206ENST00000445265 TEX48A0A1B0GUV7 120 aa12.75□□□□□ -0.37
TCOF1-206ENST00000445265 VWC2LB2RUY7 222 aa12.75□□□□□ -0.37
TCOF1-206ENST00000445265 TMEM95Q3KNT9 176 aa12.75□□□□□ -0.37
TCOF1-206ENST00000445265 TMEM86BQ8N661 226 aa12.75□□□□□ -0.37
TCOF1-206ENST00000445265 CSPG4Q6UVK1 2322 aa12.74□□□□□ -0.37
TCOF1-206ENST00000445265 E9PLD3 99 aa12.74□□□□□ -0.37
TCOF1-206ENST00000445265 LMO4P61968 165 aa12.74□□□□□ -0.37
TCOF1-206ENST00000445265 CACNA1AO00555 2505 aa12.74□□□□□ -0.37
TCOF1-206ENST00000445265 HOXD3P31249 432 aaPredicted RBP12.74□□□□□ -0.37
TCOF1-206ENST00000445265 Q8N976 141 aa12.74□□□□□ -0.37
TCOF1-206ENST00000445265 VPREB3Q9UKI3 123 aa12.74□□□□□ -0.37
TCOF1-206ENST00000445265 UNQ9165/PRO28630Q6UXU0 137 aa12.73□□□□□ -0.37
TCOF1-206ENST00000445265 BAALCQ8WXS3 180 aa12.73□□□□□ -0.37
TCOF1-206ENST00000445265 IGHV4-30-2A0A087WSY4 118 aa12.73□□□□□ -0.37
TCOF1-206ENST00000445265 IGHV3-16A0A0C4DH30 117 aa12.73□□□□□ -0.37
TCOF1-206ENST00000445265 LEPROTO15243 131 aa12.73□□□□□ -0.37
TCOF1-206ENST00000445265 TP73-AS1Q9UF72 201 aa12.73□□□□□ -0.37
TCOF1-206ENST00000445265 TNRC6BQ9UPQ9 1833 aaKnown RBP12.73□□□□□ -0.37
TCOF1-206ENST00000445265 TRAV8-3A0A0A6YYJ7 113 aa12.72□□□□□ -0.37
TCOF1-206ENST00000445265 TIMM17AQ99595 171 aa12.72□□□□□ -0.37
TCOF1-206ENST00000445265 ZFAND3Q9H8U3 227 aa12.72□□□□□ -0.37
TCOF1-206ENST00000445265 GPHB5Q86YW7 130 aa12.72□□□□□ -0.37
TCOF1-206ENST00000445265 ADAMTS20P59510 1910 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms