RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 A0A1W2PRX2 142 aa11.65□□□□□ -0.54
SNX13-204ENST00000444712 LINC01546A6NGU7 62 aa11.65□□□□□ -0.54
SNX13-204ENST00000444712 PRSS47A8MTI9 375 aa11.65□□□□□ -0.54
SNX13-204ENST00000444712 SYS1-DBNDD2H3BUS1 97 aa11.65□□□□□ -0.54
SNX13-204ENST00000444712 IGKV3-20P01619 116 aa11.65□□□□□ -0.54
SNX13-204ENST00000444712 CD7P09564 240 aa11.65□□□□□ -0.54
SNX13-204ENST00000444712 PET117Q6UWS5 81 aa11.65□□□□□ -0.54
SNX13-204ENST00000444712 AMTNQ6UX39 209 aa11.65□□□□□ -0.54
SNX13-204ENST00000444712 DEFB125Q8N687 156 aa11.65□□□□□ -0.54
SNX13-204ENST00000444712 OR2K2Q8NGT1 345 aa11.65□□□□□ -0.54
SNX13-204ENST00000444712 HBDP02042 147 aa11.64□□□□□ -0.55
SNX13-204ENST00000444712 SPINK13Q1W4C9 94 aa11.64□□□□□ -0.55
SNX13-204ENST00000444712 C11orf44Q8N8P7 122 aa11.64□□□□□ -0.55
SNX13-204ENST00000444712 SONP18583 2426 aaKnown RBP11.64□□□□□ -0.55
SNX13-204ENST00000444712 IGHV1OR15-1A0A075B7D0 117 aa11.64□□□□□ -0.55
SNX13-204ENST00000444712 PPP1R17O96001 155 aa11.64□□□□□ -0.55
SNX13-204ENST00000444712 CD300EQ496F6 205 aaPredicted RBP11.64□□□□□ -0.55
SNX13-204ENST00000444712 SMR3AQ99954 134 aa11.64□□□□□ -0.55
SNX13-204ENST00000444712 MAP6D1Q9H9H5 199 aa11.64□□□□□ -0.55
SNX13-204ENST00000444712 TRGV11A0A075B6L2 103 aa11.63□□□□□ -0.55
SNX13-204ENST00000444712 H3BMM0 161 aa11.63□□□□□ -0.55
SNX13-204ENST00000444712 Q8N8P6 123 aa11.63□□□□□ -0.55
SNX13-204ENST00000444712 PAM16Q9Y3D7 125 aa11.63□□□□□ -0.55
SNX13-204ENST00000444712 SMIM17P0DL12 118 aa11.62□□□□□ -0.55
SNX13-204ENST00000444712 SYT8Q8NBV8 401 aa11.62□□□□□ -0.55
SNX13-204ENST00000444712 TRAV12-2A0A075B6T6 113 aa11.62□□□□□ -0.55
SNX13-204ENST00000444712 FOSL1P15407 271 aa11.62□□□□□ -0.55
SNX13-204ENST00000444712 CMC4P56277 68 aaPredicted RBP11.62□□□□□ -0.55
SNX13-204ENST00000444712 PROK1P58294 105 aa11.62□□□□□ -0.55
SNX13-204ENST00000444712 C9orf85Q96MD7 179 aa11.62□□□□□ -0.55
SNX13-204ENST00000444712 CLUHP3Q96NS8 147 aa11.62□□□□□ -0.55
SNX13-204ENST00000444712 NDUFAF3Q9BU61 184 aa11.62□□□□□ -0.55
SNX13-204ENST00000444712 ZNF747Q9BV97 191 aa11.62□□□□□ -0.55
SNX13-204ENST00000444712 ITPR2Q14571 2701 aa11.61□□□□□ -0.55
SNX13-204ENST00000444712 IGHV3-16A0A0C4DH30 117 aa11.61□□□□□ -0.55
SNX13-204ENST00000444712 KNCNA6PVL3 124 aa11.61□□□□□ -0.55
SNX13-204ENST00000444712 SPATA12Q7Z6I5 190 aa11.61□□□□□ -0.55
SNX13-204ENST00000444712 NRACQ8N912 160 aa11.61□□□□□ -0.55
SNX13-204ENST00000444712 SPATA45Q537H7 98 aa11.6□□□□□ -0.55
SNX13-204ENST00000444712 ZNF256Q9Y2P7 627 aaPredicted RBP11.6□□□□□ -0.55
SNX13-204ENST00000444712 MYO9AB2RTY4 2548 aa11.6□□□□□ -0.55
SNX13-204ENST00000444712 A0A096LNJ9 63 aa11.6□□□□□ -0.55
SNX13-204ENST00000444712 LINC00173Q6ZV60 143 aa11.6□□□□□ -0.55
SNX13-204ENST00000444712 C14orf178Q8N769 122 aaPredicted RBP11.6□□□□□ -0.55
SNX13-204ENST00000444712 POM121L12Q8N7R1 296 aa11.6□□□□□ -0.55
SNX13-204ENST00000444712 C20orf78Q9BR46 151 aa11.6□□□□□ -0.55
SNX13-204ENST00000444712 TRAV9-2A0A087WT02 112 aa11.59□□□□□ -0.55
SNX13-204ENST00000444712 K7EMI3 77 aa11.59□□□□□ -0.55
SNX13-204ENST00000444712 FCER1GP30273 86 aa11.59□□□□□ -0.55
SNX13-204ENST00000444712 ZNF705AQ6ZN79 300 aaPredicted RBP11.59□□□□□ -0.55
SNX13-204ENST00000444712 Q8N1Y9 231 aa11.59□□□□□ -0.55
SNX13-204ENST00000444712 AGRNO00468 2067 aa11.59□□□□□ -0.55
SNX13-204ENST00000444712 GCN1Q92616 2671 aaKnown RBP11.59□□□□□ -0.55
SNX13-204ENST00000444712 GAS8-AS1O95177 125 aa11.59□□□□□ -0.55
SNX13-204ENST00000444712 MGPP08493 103 aa11.59□□□□□ -0.55
SNX13-204ENST00000444712 MIEN1Q9BRT3 115 aa11.59□□□□□ -0.55
SNX13-204ENST00000444712 FASNP49327 2511 aaKnown RBP11.58□□□□□ -0.56
SNX13-204ENST00000444712 IGLV2-18A0A075B6J9 118 aa11.58□□□□□ -0.56
SNX13-204ENST00000444712 GATA1P15976 413 aaPredicted RBP11.58□□□□□ -0.56
SNX13-204ENST00000444712 LINC01545Q5VT33 79 aa11.58□□□□□ -0.56
SNX13-204ENST00000444712 MUC4Q99102 2169 aa11.58□□□□□ -0.56
SNX13-204ENST00000444712 TRAV26-2A0A0B4J265 109 aa11.57□□□□□ -0.56
SNX13-204ENST00000444712 HIST2H2BDQ6DRA6 164 aa11.57□□□□□ -0.56
SNX13-204ENST00000444712 NDUFA11Q86Y39 141 aa11.57□□□□□ -0.56
SNX13-204ENST00000444712 CBY3A6NI87 242 aa11.57□□□□□ -0.56
SNX13-204ENST00000444712 HSBP1L1C9JCN9 74 aa11.57□□□□□ -0.56
SNX13-204ENST00000444712 LAGE3Q14657 143 aa11.57□□□□□ -0.56
SNX13-204ENST00000444712 C14orf144Q96I85 54 aa11.57□□□□□ -0.56
SNX13-204ENST00000444712 SMIM2Q9BVW6 85 aa11.57□□□□□ -0.56
SNX13-204ENST00000444712 ACANP16112 2415 aa11.56□□□□□ -0.56
SNX13-204ENST00000444712 OR11H12B2RN74 326 aa11.56□□□□□ -0.56
SNX13-204ENST00000444712 HIVEP2P31629 2446 aa11.56□□□□□ -0.56
SNX13-204ENST00000444712 SUMO2P61956 95 aaKnown RBP11.56□□□□□ -0.56
SNX13-204ENST00000444712 IFI27L1Q96BM0 104 aa11.56□□□□□ -0.56
SNX13-204ENST00000444712 LINC00467Q9BRT7 94 aa11.56□□□□□ -0.56
SNX13-204ENST00000444712 KIF25-AS1Q9Y6Z4 181 aa11.56□□□□□ -0.56
SNX13-204ENST00000444712 MRPL52Q86TS9 123 aaKnown RBP11.55□□□□□ -0.56
SNX13-204ENST00000444712 ATOH7Q8N100 152 aa11.55□□□□□ -0.56
SNX13-204ENST00000444712 RBMY1BA6NDE4 496 aaKnown RBP11.55□□□□□ -0.56
SNX13-204ENST00000444712 RBMY1EA6NEQ0 496 aaKnown RBP11.55□□□□□ -0.56
SNX13-204ENST00000444712 ADARB2-AS1A8MUL3 147 aa11.55□□□□□ -0.56
SNX13-204ENST00000444712 SPRY2O43597 315 aa11.55□□□□□ -0.56
SNX13-204ENST00000444712 SAP30O75446 220 aa11.55□□□□□ -0.56
SNX13-204ENST00000444712 INSP01308 110 aa11.55□□□□□ -0.56
SNX13-204ENST00000444712 RBMY1DP0C7P1 496 aaKnown RBP11.55□□□□□ -0.56
SNX13-204ENST00000444712 FXYD7P58549 80 aa11.55□□□□□ -0.56
SNX13-204ENST00000444712 LGALS9BQ3B8N2 356 aa11.55□□□□□ -0.56
SNX13-204ENST00000444712 ODF3L2Q3SX64 289 aa11.55□□□□□ -0.56
SNX13-204ENST00000444712 ORMDL2Q53FV1 153 aa11.55□□□□□ -0.56
SNX13-204ENST00000444712 LGALS9CQ6DKI2 356 aa11.55□□□□□ -0.56
SNX13-204ENST00000444712 STHQ8IWL8 128 aa11.55□□□□□ -0.56
SNX13-204ENST00000444712 RASL10AQ92737 203 aa11.55□□□□□ -0.56
SNX13-204ENST00000444712 FAM110AQ9BQ89 295 aa11.55□□□□□ -0.56
SNX13-204ENST00000444712 MDFICQ9P1T7 246 aa11.55□□□□□ -0.56
SNX13-204ENST00000444712 UQCR10Q9UDW1 63 aa11.55□□□□□ -0.56
SNX13-204ENST00000444712 INAFM1C9JVW0 142 aa11.54□□□□□ -0.56
SNX13-204ENST00000444712 RPL32P62910 135 aaKnown RBP11.54□□□□□ -0.56
SNX13-204ENST00000444712 CTAG1AP78358 180 aa11.54□□□□□ -0.56
SNX13-204ENST00000444712 NSUN5P1Q3KNT7 163 aa11.54□□□□□ -0.56
SNX13-204ENST00000444712 LBHQ53QV2 105 aaPredicted RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 118.7 ms