RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 LINC00322Q6ZN03 302 aaPredicted RBP4.01□□□□□ -1.77
SCN11A-202ENST00000444237 RPL36ALQ969Q0 106 aaKnown RBP4.01□□□□□ -1.77
SCN11A-202ENST00000444237 AJUBAQ96IF1 538 aa4.01□□□□□ -1.77
SCN11A-202ENST00000444237 GTF3C1Q12789 2109 aa4.01□□□□□ -1.77
SCN11A-202ENST00000444237 ABCA7Q8IZY2 2146 aa4□□□□□ -1.77
SCN11A-202ENST00000444237 PAX8Q06710 450 aa4□□□□□ -1.77
SCN11A-202ENST00000444237 PHF3Q92576 2039 aaKnown RBP4□□□□□ -1.77
SCN11A-202ENST00000444237 IGKV1OR2-108A0A075B7D4 117 aa4□□□□□ -1.77
SCN11A-202ENST00000444237 KLK5Q9Y337 293 aaPredicted RBP4□□□□□ -1.77
SCN11A-202ENST00000444237 SNRNP200O75643 2136 aaKnown RBP4□□□□□ -1.77
SCN11A-202ENST00000444237 WIPF1O43516 503 aa4□□□□□ -1.77
SCN11A-202ENST00000444237 FUSP35637 526 aaKnown RBP eCLIP4□□□□□ -1.77
SCN11A-202ENST00000444237 KRTAP27-1Q3LI81 207 aa4□□□□□ -1.77
SCN11A-202ENST00000444237 TMEM61Q8N0U2 210 aa4□□□□□ -1.77
SCN11A-202ENST00000444237 GAFA1Q96PS6 74 aa4□□□□□ -1.77
SCN11A-202ENST00000444237 Q9H8V8 135 aa4□□□□□ -1.77
SCN11A-202ENST00000444237 KIAA2026Q5HYC2 2103 aa4□□□□□ -1.77
SCN11A-202ENST00000444237 NXPH4O95158 308 aa4□□□□□ -1.77
SCN11A-202ENST00000444237 IGHV1-8P0DP01 117 aa4□□□□□ -1.77
SCN11A-202ENST00000444237 ZNF491Q8N8L2 437 aa4□□□□□ -1.77
SCN11A-202ENST00000444237 C1orf159Q96HA4 380 aa4□□□□□ -1.77
SCN11A-202ENST00000444237 C15orf32Q32M92 178 aa4□□□□□ -1.77
SCN11A-202ENST00000444237 C6orf226Q5I0X4 101 aa4□□□□□ -1.77
SCN11A-202ENST00000444237 WDR86Q86TI4 376 aa4□□□□□ -1.77
SCN11A-202ENST00000444237 C17orf77Q96MU5 243 aa4□□□□□ -1.77
SCN11A-202ENST00000444237 C14orf132Q9NPU4 83 aa4□□□□□ -1.77
SCN11A-202ENST00000444237 ZNF134P52741 427 aa3.99□□□□□ -1.77
SCN11A-202ENST00000444237 C17orf58Q2M2W7 97 aa3.99□□□□□ -1.77
SCN11A-202ENST00000444237 HELZP42694 1942 aaKnown RBP3.99□□□□□ -1.77
SCN11A-202ENST00000444237 A0A0J9YXV3 536 aa3.99□□□□□ -1.77
SCN11A-202ENST00000444237 A0A0J9YXY3 114 aa3.99□□□□□ -1.77
SCN11A-202ENST00000444237 C17orf100A8MU93 164 aa3.99□□□□□ -1.77
SCN11A-202ENST00000444237 H7C423 109 aa3.99□□□□□ -1.77
SCN11A-202ENST00000444237 PDE6GP18545 87 aa3.99□□□□□ -1.77
SCN11A-202ENST00000444237 BLCAPP62952 87 aa3.99□□□□□ -1.77
SCN11A-202ENST00000444237 KIR2DL5BQ8NHK3 375 aa3.99□□□□□ -1.77
SCN11A-202ENST00000444237 RPL39LQ96EH5 51 aaKnown RBP3.99□□□□□ -1.77
SCN11A-202ENST00000444237 PRO0461Q9UI25 63 aa3.99□□□□□ -1.77
SCN11A-202ENST00000444237 HHLA3Q9XRX5 114 aa3.99□□□□□ -1.77
SCN11A-202ENST00000444237 LINC00311Q8N616 119 aa3.99□□□□□ -1.77
SCN11A-202ENST00000444237 ZMAT4Q9H898 229 aa3.99□□□□□ -1.77
SCN11A-202ENST00000444237 DENND4CQ5VZ89 1909 aa3.99□□□□□ -1.77
SCN11A-202ENST00000444237 C2orf16Q68DN1 1984 aa3.99□□□□□ -1.77
SCN11A-202ENST00000444237 MED12Q93074 2177 aa3.99□□□□□ -1.77
SCN11A-202ENST00000444237 RTTNQ86VV8 2226 aa3.99□□□□□ -1.77
SCN11A-202ENST00000444237 IGHV1-58A0A0C4DH39 117 aa3.99□□□□□ -1.77
SCN11A-202ENST00000444237 B3GALT5-AS1P59052 145 aa3.99□□□□□ -1.77
SCN11A-202ENST00000444237 IGHV1OR15-1A0A075B7D0 117 aa3.98□□□□□ -1.77
SCN11A-202ENST00000444237 MED14OSP0DP75 135 aa3.98□□□□□ -1.77
SCN11A-202ENST00000444237 WFDC9Q8NEX5 89 aa3.98□□□□□ -1.77
SCN11A-202ENST00000444237 SPTSSBQ8NFR3 76 aa3.98□□□□□ -1.77
SCN11A-202ENST00000444237 TMEM263Q8WUH6 116 aaKnown RBP3.98□□□□□ -1.77
SCN11A-202ENST00000444237 LINC01587Q99440 93 aa3.98□□□□□ -1.77
SCN11A-202ENST00000444237 WI2-2373I1.2A0A1W2PRP0 233 aa3.98□□□□□ -1.77
SCN11A-202ENST00000444237 MBD3L4A6NDZ8 208 aaPredicted RBP3.98□□□□□ -1.77
SCN11A-202ENST00000444237 MBD3L3A6NE82 208 aaPredicted RBP3.98□□□□□ -1.77
SCN11A-202ENST00000444237 MBD3L5A6NJ08 208 aaPredicted RBP3.98□□□□□ -1.77
SCN11A-202ENST00000444237 HOXD3P31249 432 aaPredicted RBP3.98□□□□□ -1.77
SCN11A-202ENST00000444237 PMAIP1Q13794 54 aa3.98□□□□□ -1.77
SCN11A-202ENST00000444237 PLA2G2CQ5R387 149 aa3.98□□□□□ -1.77
SCN11A-202ENST00000444237 FDCSPQ8NFU4 85 aa3.98□□□□□ -1.77
SCN11A-202ENST00000444237 DPH3Q96FX2 82 aa3.98□□□□□ -1.77
SCN11A-202ENST00000444237 KIF26AQ9ULI4 1882 aaPredicted RBP3.98□□□□□ -1.77
SCN11A-202ENST00000444237 IGHV1-18A0A0C4DH31 117 aa3.98□□□□□ -1.77
SCN11A-202ENST00000444237 ARHGAP21Q5T5U3 1957 aa3.98□□□□□ -1.77
SCN11A-202ENST00000444237 IGHV3OR16-12A0A075B7B8 117 aa3.98□□□□□ -1.77
SCN11A-202ENST00000444237 TMEM256-PLSCR3K7ERE1 68 aa3.98□□□□□ -1.77
SCN11A-202ENST00000444237 IGHV1-46P01743 117 aa3.98□□□□□ -1.77
SCN11A-202ENST00000444237 IGHV3-30-3P0DP02 117 aa3.98□□□□□ -1.77
SCN11A-202ENST00000444237 MYCNOSP40205 109 aa3.98□□□□□ -1.77
SCN11A-202ENST00000444237 COL4A3Q01955 1670 aa3.98□□□□□ -1.77
SCN11A-202ENST00000444237 LECT2O14960 151 aa3.97□□□□□ -1.77
SCN11A-202ENST00000444237 FOXE3Q13461 319 aa3.97□□□□□ -1.77
SCN11A-202ENST00000444237 CRIP3Q6Q6R5 217 aa3.97□□□□□ -1.77
SCN11A-202ENST00000444237 Q6ZPA2 131 aa3.97□□□□□ -1.77
SCN11A-202ENST00000444237 FGF23Q9GZV9 251 aaPredicted RBP3.97□□□□□ -1.77
SCN11A-202ENST00000444237 PROK2Q9HC23 129 aa3.97□□□□□ -1.77
SCN11A-202ENST00000444237 PYGO1Q9Y3Y4 419 aa3.97□□□□□ -1.77
SCN11A-202ENST00000444237 PLXNB3Q9ULL4 1909 aa3.97□□□□□ -1.77
SCN11A-202ENST00000444237 BUB1B-PAK6H3BSN5 160 aa3.97□□□□□ -1.77
SCN11A-202ENST00000444237 C4orf26Q17RF5 130 aa3.97□□□□□ -1.77
SCN11A-202ENST00000444237 HIST2H2BCQ6DN03 193 aa3.97□□□□□ -1.77
SCN11A-202ENST00000444237 HIST2H2BDQ6DRA6 164 aa3.97□□□□□ -1.77
SCN11A-202ENST00000444237 SND1-IT1Q9HBX3 110 aa3.97□□□□□ -1.77
SCN11A-202ENST00000444237 RNF138Q8WVD3 245 aa3.97□□□□□ -1.77
SCN11A-202ENST00000444237 IGHV3-73A0A0B4J1V6 119 aa3.97□□□□□ -1.77
SCN11A-202ENST00000444237 SUMO4Q6EEV6 95 aa3.97□□□□□ -1.77
SCN11A-202ENST00000444237 ENHOQ6UWT2 76 aa3.97□□□□□ -1.77
SCN11A-202ENST00000444237 MRPL36Q9P0J6 103 aaKnown RBP3.97□□□□□ -1.77
SCN11A-202ENST00000444237 TRAV7A0A075B6U4 112 aa3.96□□□□□ -1.77
SCN11A-202ENST00000444237 TIRAPP58753 221 aa3.96□□□□□ -1.77
SCN11A-202ENST00000444237 ODF3Q96PU9 254 aa3.96□□□□□ -1.77
SCN11A-202ENST00000444237 PTPRSQ13332 1948 aa3.96□□□□□ -1.77
SCN11A-202ENST00000444237 TMEM223A0PJW6 202 aa3.96□□□□□ -1.78
SCN11A-202ENST00000444237 RPL39P62891 51 aaKnown RBP3.96□□□□□ -1.78
SCN11A-202ENST00000444237 PRB3Q04118 309 aaPredicted RBP3.96□□□□□ -1.78
SCN11A-202ENST00000444237 Q8N7P7 452 aa3.96□□□□□ -1.78
SCN11A-202ENST00000444237 MED12LQ86YW9 2145 aa3.96□□□□□ -1.78
SCN11A-202ENST00000444237 ANAPC1Q9H1A4 1944 aa3.96□□□□□ -1.78
SCN11A-202ENST00000444237 ARHGEF17Q96PE2 2063 aaPredicted RBP3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms